BLASTX nr result

ID: Coptis24_contig00019519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019519
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26373.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_002284360.1| PREDICTED: uncharacterized protein LOC100258...   160   1e-37
ref|XP_002312576.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36
ref|XP_002517010.1| conserved hypothetical protein [Ricinus comm...   153   1e-35
ref|NP_001239708.1| uncharacterized protein LOC100797456 [Glycin...   152   3e-35

>emb|CBI26373.3| unnamed protein product [Vitis vinifera]
          Length = 450

 Score =  160 bits (405), Expect = 1e-37
 Identities = 78/111 (70%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
 Frame = -1

Query: 413 QPDNKKHTDEDDTCSIAXXXXXXXXXXXXXTI-ATAPKFRCTERADKRKEFYSKLEEKHQ 237
           +PDNKKH DE+D+CS+               I A+AP FRCT RA+KRKEFYSKLEEKHQ
Sbjct: 237 EPDNKKHPDEEDSCSVTSSTAPSARTVKSRAIVASAPVFRCTARAEKRKEFYSKLEEKHQ 296

Query: 236 ALEAERNQCEARTKEEREATLKQLRKSLTFRANPMPSFYQEGPPPKVELKK 84
           ALEAE+NQCEARTKEEREA +KQLRKSL F+A+PMPSFY EGPPPK ELKK
Sbjct: 297 ALEAEKNQCEARTKEEREAAIKQLRKSLMFKASPMPSFYHEGPPPKAELKK 347


>ref|XP_002284360.1| PREDICTED: uncharacterized protein LOC100258034 [Vitis vinifera]
          Length = 412

 Score =  160 bits (405), Expect = 1e-37
 Identities = 78/111 (70%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
 Frame = -1

Query: 413 QPDNKKHTDEDDTCSIAXXXXXXXXXXXXXTI-ATAPKFRCTERADKRKEFYSKLEEKHQ 237
           +PDNKKH DE+D+CS+               I A+AP FRCT RA+KRKEFYSKLEEKHQ
Sbjct: 199 EPDNKKHPDEEDSCSVTSSTAPSARTVKSRAIVASAPVFRCTARAEKRKEFYSKLEEKHQ 258

Query: 236 ALEAERNQCEARTKEEREATLKQLRKSLTFRANPMPSFYQEGPPPKVELKK 84
           ALEAE+NQCEARTKEEREA +KQLRKSL F+A+PMPSFY EGPPPK ELKK
Sbjct: 259 ALEAEKNQCEARTKEEREAAIKQLRKSLMFKASPMPSFYHEGPPPKAELKK 309


>ref|XP_002312576.1| predicted protein [Populus trichocarpa] gi|222852396|gb|EEE89943.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  155 bits (392), Expect = 3e-36
 Identities = 77/111 (69%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
 Frame = -1

Query: 413 QPDNKKHTDEDDTCSIAXXXXXXXXXXXXXTIATA-PKFRCTERADKRKEFYSKLEEKHQ 237
           QP+NKKH DE+D CS+                A A P FRCTERA+KRKEFYSKLEEK+Q
Sbjct: 199 QPNNKKHPDEEDNCSVTSSTTASARPIMSKATAVAAPVFRCTERAEKRKEFYSKLEEKYQ 258

Query: 236 ALEAERNQCEARTKEEREATLKQLRKSLTFRANPMPSFYQEGPPPKVELKK 84
           ALEAE+ Q EARTKEE+EA +KQLRKSLTF+ANPMPSFY EGPPPKVELKK
Sbjct: 259 ALEAEKTQSEARTKEEKEAAIKQLRKSLTFKANPMPSFYHEGPPPKVELKK 309


>ref|XP_002517010.1| conserved hypothetical protein [Ricinus communis]
           gi|223543645|gb|EEF45173.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 391

 Score =  153 bits (387), Expect = 1e-35
 Identities = 75/111 (67%), Positives = 87/111 (78%), Gaps = 1/111 (0%)
 Frame = -1

Query: 413 QPDNKKHTDEDDTCSI-AXXXXXXXXXXXXXTIATAPKFRCTERADKRKEFYSKLEEKHQ 237
           QP+NKKH DE+DTCS+ +               A+AP FRC+ERA+KRKEFYSKLEEKHQ
Sbjct: 191 QPNNKKHPDEEDTCSVTSITAASARTTKSRSAAASAPVFRCSERAEKRKEFYSKLEEKHQ 250

Query: 236 ALEAERNQCEARTKEEREATLKQLRKSLTFRANPMPSFYQEGPPPKVELKK 84
           ALEAE+ + EARTKEE+EA +KQLRKSL F+ANPMPSFY EGPPPK ELKK
Sbjct: 251 ALEAEKTESEARTKEEKEADIKQLRKSLLFKANPMPSFYHEGPPPKTELKK 301


>ref|NP_001239708.1| uncharacterized protein LOC100797456 [Glycine max]
           gi|255647775|gb|ACU24348.1| unknown [Glycine max]
          Length = 388

 Score =  152 bits (384), Expect = 3e-35
 Identities = 76/111 (68%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
 Frame = -1

Query: 413 QPDNKKHTDEDDTCSIAXXXXXXXXXXXXXT-IATAPKFRCTERADKRKEFYSKLEEKHQ 237
           QPDNKKH D+DD+CS+A             T +A+AP FR T+RA+KRKEFYSKLEEK Q
Sbjct: 194 QPDNKKHPDDDDSCSVASITAASVRSIKSRTTVASAPVFRSTQRAEKRKEFYSKLEEKQQ 253

Query: 236 ALEAERNQCEARTKEEREATLKQLRKSLTFRANPMPSFYQEGPPPKVELKK 84
           A+EAE+NQ EARTKEE E  +KQLRKSLTF+A+PMPSFY EGPPPKVELKK
Sbjct: 254 AMEAEKNQSEARTKEEMEEAIKQLRKSLTFKASPMPSFYHEGPPPKVELKK 304


Top