BLASTX nr result

ID: Coptis24_contig00019514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019514
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874225.1| ABC1 family protein [Arabidopsis lyrata subs...    76   4e-25
ref|XP_002283043.1| PREDICTED: uncharacterized protein LOC100242...    79   2e-24
ref|XP_003563512.1| PREDICTED: uncharacterized protein LOC100845...    75   3e-24
ref|XP_004163502.1| PREDICTED: uncharacterized protein LOC101229...    77   5e-24
ref|XP_004136301.1| PREDICTED: uncharacterized protein LOC101216...    77   5e-24

>ref|XP_002874225.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320062|gb|EFH50484.1| ABC1 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1011

 Score = 76.3 bits (186), Expect(3) = 4e-25
 Identities = 36/70 (51%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
 Frame = -1

Query: 210 QMVSSLVILFNSLNIRRAIIPAANGHCSXXXXXXXXXXXXXXGIIPPPHTH-SEPALGSH 34
           Q+ ++L +LFN+LN+RRAIIPAANGHCS              G++PPPH+  S+P LGSH
Sbjct: 755 QLATNLPVLFNTLNVRRAIIPAANGHCSARALARYYATLADGGLVPPPHSSLSQPPLGSH 814

Query: 33  PHIPNFPSLQ 4
            H+P F SL+
Sbjct: 815 THVPKFTSLK 824



 Score = 56.2 bits (134), Expect(3) = 4e-25
 Identities = 28/42 (66%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
 Frame = -3

Query: 364 LNIEGELYIGIPPGVESRLATLTVDMEDLKLLSGI-SRPSYP 242
           L I+GELYIGIPPGVESRLATLT+D +++  LS I S+P  P
Sbjct: 704 LKIDGELYIGIPPGVESRLATLTLDTDEMSKLSSIASQPELP 745



 Score = 27.3 bits (59), Expect(3) = 4e-25
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -2

Query: 257 QTELPSTFQPGQISQARWCLPL 192
           Q ELPSTFQP +I Q    LP+
Sbjct: 741 QPELPSTFQPDKILQLATNLPV 762


>ref|XP_002283043.1| PREDICTED: uncharacterized protein LOC100242392 [Vitis vinifera]
          Length = 978

 Score = 79.0 bits (193), Expect(2) = 2e-24
 Identities = 44/86 (51%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
 Frame = -1

Query: 264 VSADRVTLHLPAWSDIPGQMVSSLVILFNSLNIRRAIIPAANGHCSXXXXXXXXXXXXXX 85
           V ++R  L +   S+I  ++V+ L  LFN+LNIRR+IIP+ANGHCS              
Sbjct: 690 VYSNRPDLPVSFTSNI-SELVTVLPALFNTLNIRRSIIPSANGHCSARALARYYATLADG 748

Query: 84  GIIPPPH-THSEPALGSHPHIPNFPS 10
           GI+PPPH T S+P LGSHPHIP+FPS
Sbjct: 749 GILPPPHSTSSKPPLGSHPHIPSFPS 774



 Score = 58.5 bits (140), Expect(2) = 2e-24
 Identities = 30/42 (71%), Positives = 34/42 (80%), Gaps = 1/42 (2%)
 Frame = -3

Query: 364 LNIEGELYIGIPPGVESRLATLTVDMEDLKLLSGIS-RPSYP 242
           L IEGELY+GIPPGVESRLATLTVD +D++ LS  S RP  P
Sbjct: 657 LQIEGELYVGIPPGVESRLATLTVDTDDVRKLSVYSNRPDLP 698


>ref|XP_003563512.1| PREDICTED: uncharacterized protein LOC100845772 [Brachypodium
           distachyon]
          Length = 940

 Score = 75.5 bits (184), Expect(2) = 3e-24
 Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 8/82 (9%)
 Frame = -1

Query: 222 DIPGQMVSSLV-------ILFNSLNIRRAIIPAANGHCSXXXXXXXXXXXXXXGIIPPPH 64
           D+P ++VSS+         LFN+LN+RRAIIPAANGHCS              G IPPPH
Sbjct: 696 DVPPELVSSIAQMASGVPALFNTLNVRRAIIPAANGHCSARALARYYAALAAGGAIPPPH 755

Query: 63  T-HSEPALGSHPHIPNFPSLQP 1
           + +S+P LGSH H P FP+ +P
Sbjct: 756 SGNSKPPLGSHLHTPMFPTAEP 777



 Score = 61.2 bits (147), Expect(2) = 3e-24
 Identities = 33/47 (70%), Positives = 36/47 (76%)
 Frame = -3

Query: 364 LNIEGELYIGIPPGVESRLATLTVDMEDLKLLSGISRPSYPPPSSLV 224
           L IEGELYIGIPPGVESRLA LTVD+E+L+ LSG  RP    P  LV
Sbjct: 657 LQIEGELYIGIPPGVESRLAALTVDVEELQKLSGF-RPGPDVPPELV 702


>ref|XP_004163502.1| PREDICTED: uncharacterized protein LOC101229760 [Cucumis sativus]
          Length = 967

 Score = 77.4 bits (189), Expect(2) = 5e-24
 Identities = 40/71 (56%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
 Frame = -1

Query: 210 QMVSSLVILFNSLNIRRAIIPAANGHCSXXXXXXXXXXXXXXGIIPPPH-THSEPALGSH 34
           Q +++L  LFN LN RRAIIPAANGHCS              G+IPPPH + S+PALGSH
Sbjct: 706 QFITTLTPLFNMLNTRRAIIPAANGHCSARALARYYAALADGGVIPPPHSSSSQPALGSH 765

Query: 33  PHIPNFPSLQP 1
           PHIP F S  P
Sbjct: 766 PHIPKFTSEIP 776



 Score = 58.5 bits (140), Expect(2) = 5e-24
 Identities = 26/41 (63%), Positives = 34/41 (82%)
 Frame = -3

Query: 364 LNIEGELYIGIPPGVESRLATLTVDMEDLKLLSGISRPSYP 242
           L++EGELY+GIPPGVE+RLATLT +++D+   SGISR   P
Sbjct: 656 LHVEGELYVGIPPGVETRLATLTPNLDDILKFSGISRSDLP 696


>ref|XP_004136301.1| PREDICTED: uncharacterized protein LOC101216220 [Cucumis sativus]
          Length = 965

 Score = 77.4 bits (189), Expect(2) = 5e-24
 Identities = 40/71 (56%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
 Frame = -1

Query: 210 QMVSSLVILFNSLNIRRAIIPAANGHCSXXXXXXXXXXXXXXGIIPPPH-THSEPALGSH 34
           Q +++L  LFN LN RRAIIPAANGHCS              G+IPPPH + S+PALGSH
Sbjct: 704 QFITTLTPLFNMLNTRRAIIPAANGHCSARALARYYAALADGGVIPPPHSSSSQPALGSH 763

Query: 33  PHIPNFPSLQP 1
           PHIP F S  P
Sbjct: 764 PHIPKFTSEIP 774



 Score = 58.5 bits (140), Expect(2) = 5e-24
 Identities = 26/41 (63%), Positives = 34/41 (82%)
 Frame = -3

Query: 364 LNIEGELYIGIPPGVESRLATLTVDMEDLKLLSGISRPSYP 242
           L++EGELY+GIPPGVE+RLATLT +++D+   SGISR   P
Sbjct: 654 LHVEGELYVGIPPGVETRLATLTPNLDDILKFSGISRSDLP 694


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