BLASTX nr result
ID: Coptis24_contig00019514
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019514 (366 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002874225.1| ABC1 family protein [Arabidopsis lyrata subs... 76 4e-25 ref|XP_002283043.1| PREDICTED: uncharacterized protein LOC100242... 79 2e-24 ref|XP_003563512.1| PREDICTED: uncharacterized protein LOC100845... 75 3e-24 ref|XP_004163502.1| PREDICTED: uncharacterized protein LOC101229... 77 5e-24 ref|XP_004136301.1| PREDICTED: uncharacterized protein LOC101216... 77 5e-24 >ref|XP_002874225.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata] gi|297320062|gb|EFH50484.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata] Length = 1011 Score = 76.3 bits (186), Expect(3) = 4e-25 Identities = 36/70 (51%), Positives = 48/70 (68%), Gaps = 1/70 (1%) Frame = -1 Query: 210 QMVSSLVILFNSLNIRRAIIPAANGHCSXXXXXXXXXXXXXXGIIPPPHTH-SEPALGSH 34 Q+ ++L +LFN+LN+RRAIIPAANGHCS G++PPPH+ S+P LGSH Sbjct: 755 QLATNLPVLFNTLNVRRAIIPAANGHCSARALARYYATLADGGLVPPPHSSLSQPPLGSH 814 Query: 33 PHIPNFPSLQ 4 H+P F SL+ Sbjct: 815 THVPKFTSLK 824 Score = 56.2 bits (134), Expect(3) = 4e-25 Identities = 28/42 (66%), Positives = 34/42 (80%), Gaps = 1/42 (2%) Frame = -3 Query: 364 LNIEGELYIGIPPGVESRLATLTVDMEDLKLLSGI-SRPSYP 242 L I+GELYIGIPPGVESRLATLT+D +++ LS I S+P P Sbjct: 704 LKIDGELYIGIPPGVESRLATLTLDTDEMSKLSSIASQPELP 745 Score = 27.3 bits (59), Expect(3) = 4e-25 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = -2 Query: 257 QTELPSTFQPGQISQARWCLPL 192 Q ELPSTFQP +I Q LP+ Sbjct: 741 QPELPSTFQPDKILQLATNLPV 762 >ref|XP_002283043.1| PREDICTED: uncharacterized protein LOC100242392 [Vitis vinifera] Length = 978 Score = 79.0 bits (193), Expect(2) = 2e-24 Identities = 44/86 (51%), Positives = 57/86 (66%), Gaps = 1/86 (1%) Frame = -1 Query: 264 VSADRVTLHLPAWSDIPGQMVSSLVILFNSLNIRRAIIPAANGHCSXXXXXXXXXXXXXX 85 V ++R L + S+I ++V+ L LFN+LNIRR+IIP+ANGHCS Sbjct: 690 VYSNRPDLPVSFTSNI-SELVTVLPALFNTLNIRRSIIPSANGHCSARALARYYATLADG 748 Query: 84 GIIPPPH-THSEPALGSHPHIPNFPS 10 GI+PPPH T S+P LGSHPHIP+FPS Sbjct: 749 GILPPPHSTSSKPPLGSHPHIPSFPS 774 Score = 58.5 bits (140), Expect(2) = 2e-24 Identities = 30/42 (71%), Positives = 34/42 (80%), Gaps = 1/42 (2%) Frame = -3 Query: 364 LNIEGELYIGIPPGVESRLATLTVDMEDLKLLSGIS-RPSYP 242 L IEGELY+GIPPGVESRLATLTVD +D++ LS S RP P Sbjct: 657 LQIEGELYVGIPPGVESRLATLTVDTDDVRKLSVYSNRPDLP 698 >ref|XP_003563512.1| PREDICTED: uncharacterized protein LOC100845772 [Brachypodium distachyon] Length = 940 Score = 75.5 bits (184), Expect(2) = 3e-24 Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 8/82 (9%) Frame = -1 Query: 222 DIPGQMVSSLV-------ILFNSLNIRRAIIPAANGHCSXXXXXXXXXXXXXXGIIPPPH 64 D+P ++VSS+ LFN+LN+RRAIIPAANGHCS G IPPPH Sbjct: 696 DVPPELVSSIAQMASGVPALFNTLNVRRAIIPAANGHCSARALARYYAALAAGGAIPPPH 755 Query: 63 T-HSEPALGSHPHIPNFPSLQP 1 + +S+P LGSH H P FP+ +P Sbjct: 756 SGNSKPPLGSHLHTPMFPTAEP 777 Score = 61.2 bits (147), Expect(2) = 3e-24 Identities = 33/47 (70%), Positives = 36/47 (76%) Frame = -3 Query: 364 LNIEGELYIGIPPGVESRLATLTVDMEDLKLLSGISRPSYPPPSSLV 224 L IEGELYIGIPPGVESRLA LTVD+E+L+ LSG RP P LV Sbjct: 657 LQIEGELYIGIPPGVESRLAALTVDVEELQKLSGF-RPGPDVPPELV 702 >ref|XP_004163502.1| PREDICTED: uncharacterized protein LOC101229760 [Cucumis sativus] Length = 967 Score = 77.4 bits (189), Expect(2) = 5e-24 Identities = 40/71 (56%), Positives = 46/71 (64%), Gaps = 1/71 (1%) Frame = -1 Query: 210 QMVSSLVILFNSLNIRRAIIPAANGHCSXXXXXXXXXXXXXXGIIPPPH-THSEPALGSH 34 Q +++L LFN LN RRAIIPAANGHCS G+IPPPH + S+PALGSH Sbjct: 706 QFITTLTPLFNMLNTRRAIIPAANGHCSARALARYYAALADGGVIPPPHSSSSQPALGSH 765 Query: 33 PHIPNFPSLQP 1 PHIP F S P Sbjct: 766 PHIPKFTSEIP 776 Score = 58.5 bits (140), Expect(2) = 5e-24 Identities = 26/41 (63%), Positives = 34/41 (82%) Frame = -3 Query: 364 LNIEGELYIGIPPGVESRLATLTVDMEDLKLLSGISRPSYP 242 L++EGELY+GIPPGVE+RLATLT +++D+ SGISR P Sbjct: 656 LHVEGELYVGIPPGVETRLATLTPNLDDILKFSGISRSDLP 696 >ref|XP_004136301.1| PREDICTED: uncharacterized protein LOC101216220 [Cucumis sativus] Length = 965 Score = 77.4 bits (189), Expect(2) = 5e-24 Identities = 40/71 (56%), Positives = 46/71 (64%), Gaps = 1/71 (1%) Frame = -1 Query: 210 QMVSSLVILFNSLNIRRAIIPAANGHCSXXXXXXXXXXXXXXGIIPPPH-THSEPALGSH 34 Q +++L LFN LN RRAIIPAANGHCS G+IPPPH + S+PALGSH Sbjct: 704 QFITTLTPLFNMLNTRRAIIPAANGHCSARALARYYAALADGGVIPPPHSSSSQPALGSH 763 Query: 33 PHIPNFPSLQP 1 PHIP F S P Sbjct: 764 PHIPKFTSEIP 774 Score = 58.5 bits (140), Expect(2) = 5e-24 Identities = 26/41 (63%), Positives = 34/41 (82%) Frame = -3 Query: 364 LNIEGELYIGIPPGVESRLATLTVDMEDLKLLSGISRPSYP 242 L++EGELY+GIPPGVE+RLATLT +++D+ SGISR P Sbjct: 654 LHVEGELYVGIPPGVETRLATLTPNLDDILKFSGISRSDLP 694