BLASTX nr result

ID: Coptis24_contig00019497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019497
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274122.1| PREDICTED: uncharacterized protein LOC100260...    82   5e-14
emb|CAN70485.1| hypothetical protein VITISV_041712 [Vitis vinifera]    82   5e-14
ref|XP_002517908.1| conserved hypothetical protein [Ricinus comm...    81   8e-14
ref|XP_003607460.1| hypothetical protein MTR_4g078240 [Medicago ...    79   4e-13
ref|XP_003539535.1| PREDICTED: uncharacterized protein LOC100820...    75   6e-12

>ref|XP_002274122.1| PREDICTED: uncharacterized protein LOC100260881 [Vitis vinifera]
          Length = 182

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 56/137 (40%), Positives = 62/137 (45%), Gaps = 6/137 (4%)
 Frame = -1

Query: 394 RKNKMADEYFEPNPRPS------LLRRILSKRRTWVCLFISVYGXXXXXXXXXXXXXLDW 233
           R+ +  +E   P+  P       L+  ILSKRRTWVCLFI VY              L W
Sbjct: 6   REEEEEEEVRTPSSPPQSQSSHMLVLSILSKRRTWVCLFILVYAALLFFSWNLLKTILSW 65

Query: 232 YNXXXXXXXXXXXXXXXXSFGWPALYASVLFGAVFGLLSMXXXXXXXXXAXXXXXXXXXX 53
           YN                 FGWPALYASVL G VFGLLSM         A          
Sbjct: 66  YNNSMSSSSPPSS------FGWPALYASVLLGVVFGLLSMVAALAVAVPATLVTWITVLV 119

Query: 52  XLAFAGKPRRALVLEGR 2
            L F GKPRR LV+EGR
Sbjct: 120 LLTFCGKPRRTLVVEGR 136


>emb|CAN70485.1| hypothetical protein VITISV_041712 [Vitis vinifera]
          Length = 179

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 56/137 (40%), Positives = 62/137 (45%), Gaps = 6/137 (4%)
 Frame = -1

Query: 394 RKNKMADEYFEPNPRPS------LLRRILSKRRTWVCLFISVYGXXXXXXXXXXXXXLDW 233
           R+ +  +E   P+  P       L+  ILSKRRTWVCLFI VY              L W
Sbjct: 3   REEEEEEEVRTPSSPPQSQSSHMLVLSILSKRRTWVCLFILVYAALLFFSWNLLKTILSW 62

Query: 232 YNXXXXXXXXXXXXXXXXSFGWPALYASVLFGAVFGLLSMXXXXXXXXXAXXXXXXXXXX 53
           YN                 FGWPALYASVL G VFGLLSM         A          
Sbjct: 63  YNNSMSSSSPPSS------FGWPALYASVLLGVVFGLLSMVAALAVAVPATLVTWITVLV 116

Query: 52  XLAFAGKPRRALVLEGR 2
            L F GKPRR LV+EGR
Sbjct: 117 LLTFCGKPRRTLVVEGR 133


>ref|XP_002517908.1| conserved hypothetical protein [Ricinus communis]
           gi|223542890|gb|EEF44426.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 168

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 52/121 (42%), Positives = 58/121 (47%)
 Frame = -1

Query: 364 EPNPRPSLLRRILSKRRTWVCLFISVYGXXXXXXXXXXXXXLDWYNXXXXXXXXXXXXXX 185
           +P+   SL   ++SKRRTWVCLF+ VY              L WY               
Sbjct: 16  QPSSTYSLFITVMSKRRTWVCLFVLVYTILLSSSWNLLKSVLSWYKEQSQVATSS----- 70

Query: 184 XXSFGWPALYASVLFGAVFGLLSMXXXXXXXXXAXXXXXXXXXXXLAFAGKPRRALVLEG 5
               GWPALYASVL GAVFGLLSM         A           LAF GKPRRALV+EG
Sbjct: 71  ----GWPALYASVLLGAVFGLLSMVAALAVAVPATLVIWITVVVLLAFFGKPRRALVIEG 126

Query: 4   R 2
           R
Sbjct: 127 R 127


>ref|XP_003607460.1| hypothetical protein MTR_4g078240 [Medicago truncatula]
           gi|217071038|gb|ACJ83879.1| unknown [Medicago
           truncatula] gi|355508515|gb|AES89657.1| hypothetical
           protein MTR_4g078240 [Medicago truncatula]
           gi|388501324|gb|AFK38728.1| unknown [Medicago
           truncatula]
          Length = 167

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 50/114 (43%), Positives = 53/114 (46%)
 Frame = -1

Query: 343 LLRRILSKRRTWVCLFISVYGXXXXXXXXXXXXXLDWYNXXXXXXXXXXXXXXXXSFGWP 164
           LL  I+SKRRTW CLF  VYG             L WYN                  GWP
Sbjct: 25  LLLNIMSKRRTWACLFFLVYGTLLASSWNFLKSMLSWYNLQAQSSTS----------GWP 74

Query: 163 ALYASVLFGAVFGLLSMXXXXXXXXXAXXXXXXXXXXXLAFAGKPRRALVLEGR 2
           A+YASVL G VFGLLSM         A           LAF GKPRR LV+EGR
Sbjct: 75  AIYASVLLGTVFGLLSMVAALVIMVPAVMVTWITIVVLLAFFGKPRRTLVVEGR 128


>ref|XP_003539535.1| PREDICTED: uncharacterized protein LOC100820371 [Glycine max]
          Length = 191

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 46/114 (40%), Positives = 55/114 (48%)
 Frame = -1

Query: 343 LLRRILSKRRTWVCLFISVYGXXXXXXXXXXXXXLDWYNXXXXXXXXXXXXXXXXSFGWP 164
           LL +I+SKR+TWVC+F+ VYG             + WY                    WP
Sbjct: 25  LLLQIMSKRKTWVCIFVLVYGLLFTSSWNFLKSMVSWYKLRAAESSITSW--------WP 76

Query: 163 ALYASVLFGAVFGLLSMXXXXXXXXXAXXXXXXXXXXXLAFAGKPRRALVLEGR 2
           ALYASVL GAVFG+LSM         A           LAF GKP+R LV+EGR
Sbjct: 77  ALYASVLLGAVFGVLSMVAALAVVVPAVLVTWIALVGLLAFFGKPKRTLVVEGR 130


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