BLASTX nr result
ID: Coptis24_contig00019497
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019497 (490 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274122.1| PREDICTED: uncharacterized protein LOC100260... 82 5e-14 emb|CAN70485.1| hypothetical protein VITISV_041712 [Vitis vinifera] 82 5e-14 ref|XP_002517908.1| conserved hypothetical protein [Ricinus comm... 81 8e-14 ref|XP_003607460.1| hypothetical protein MTR_4g078240 [Medicago ... 79 4e-13 ref|XP_003539535.1| PREDICTED: uncharacterized protein LOC100820... 75 6e-12 >ref|XP_002274122.1| PREDICTED: uncharacterized protein LOC100260881 [Vitis vinifera] Length = 182 Score = 82.0 bits (201), Expect = 5e-14 Identities = 56/137 (40%), Positives = 62/137 (45%), Gaps = 6/137 (4%) Frame = -1 Query: 394 RKNKMADEYFEPNPRPS------LLRRILSKRRTWVCLFISVYGXXXXXXXXXXXXXLDW 233 R+ + +E P+ P L+ ILSKRRTWVCLFI VY L W Sbjct: 6 REEEEEEEVRTPSSPPQSQSSHMLVLSILSKRRTWVCLFILVYAALLFFSWNLLKTILSW 65 Query: 232 YNXXXXXXXXXXXXXXXXSFGWPALYASVLFGAVFGLLSMXXXXXXXXXAXXXXXXXXXX 53 YN FGWPALYASVL G VFGLLSM A Sbjct: 66 YNNSMSSSSPPSS------FGWPALYASVLLGVVFGLLSMVAALAVAVPATLVTWITVLV 119 Query: 52 XLAFAGKPRRALVLEGR 2 L F GKPRR LV+EGR Sbjct: 120 LLTFCGKPRRTLVVEGR 136 >emb|CAN70485.1| hypothetical protein VITISV_041712 [Vitis vinifera] Length = 179 Score = 82.0 bits (201), Expect = 5e-14 Identities = 56/137 (40%), Positives = 62/137 (45%), Gaps = 6/137 (4%) Frame = -1 Query: 394 RKNKMADEYFEPNPRPS------LLRRILSKRRTWVCLFISVYGXXXXXXXXXXXXXLDW 233 R+ + +E P+ P L+ ILSKRRTWVCLFI VY L W Sbjct: 3 REEEEEEEVRTPSSPPQSQSSHMLVLSILSKRRTWVCLFILVYAALLFFSWNLLKTILSW 62 Query: 232 YNXXXXXXXXXXXXXXXXSFGWPALYASVLFGAVFGLLSMXXXXXXXXXAXXXXXXXXXX 53 YN FGWPALYASVL G VFGLLSM A Sbjct: 63 YNNSMSSSSPPSS------FGWPALYASVLLGVVFGLLSMVAALAVAVPATLVTWITVLV 116 Query: 52 XLAFAGKPRRALVLEGR 2 L F GKPRR LV+EGR Sbjct: 117 LLTFCGKPRRTLVVEGR 133 >ref|XP_002517908.1| conserved hypothetical protein [Ricinus communis] gi|223542890|gb|EEF44426.1| conserved hypothetical protein [Ricinus communis] Length = 168 Score = 81.3 bits (199), Expect = 8e-14 Identities = 52/121 (42%), Positives = 58/121 (47%) Frame = -1 Query: 364 EPNPRPSLLRRILSKRRTWVCLFISVYGXXXXXXXXXXXXXLDWYNXXXXXXXXXXXXXX 185 +P+ SL ++SKRRTWVCLF+ VY L WY Sbjct: 16 QPSSTYSLFITVMSKRRTWVCLFVLVYTILLSSSWNLLKSVLSWYKEQSQVATSS----- 70 Query: 184 XXSFGWPALYASVLFGAVFGLLSMXXXXXXXXXAXXXXXXXXXXXLAFAGKPRRALVLEG 5 GWPALYASVL GAVFGLLSM A LAF GKPRRALV+EG Sbjct: 71 ----GWPALYASVLLGAVFGLLSMVAALAVAVPATLVIWITVVVLLAFFGKPRRALVIEG 126 Query: 4 R 2 R Sbjct: 127 R 127 >ref|XP_003607460.1| hypothetical protein MTR_4g078240 [Medicago truncatula] gi|217071038|gb|ACJ83879.1| unknown [Medicago truncatula] gi|355508515|gb|AES89657.1| hypothetical protein MTR_4g078240 [Medicago truncatula] gi|388501324|gb|AFK38728.1| unknown [Medicago truncatula] Length = 167 Score = 79.0 bits (193), Expect = 4e-13 Identities = 50/114 (43%), Positives = 53/114 (46%) Frame = -1 Query: 343 LLRRILSKRRTWVCLFISVYGXXXXXXXXXXXXXLDWYNXXXXXXXXXXXXXXXXSFGWP 164 LL I+SKRRTW CLF VYG L WYN GWP Sbjct: 25 LLLNIMSKRRTWACLFFLVYGTLLASSWNFLKSMLSWYNLQAQSSTS----------GWP 74 Query: 163 ALYASVLFGAVFGLLSMXXXXXXXXXAXXXXXXXXXXXLAFAGKPRRALVLEGR 2 A+YASVL G VFGLLSM A LAF GKPRR LV+EGR Sbjct: 75 AIYASVLLGTVFGLLSMVAALVIMVPAVMVTWITIVVLLAFFGKPRRTLVVEGR 128 >ref|XP_003539535.1| PREDICTED: uncharacterized protein LOC100820371 [Glycine max] Length = 191 Score = 75.1 bits (183), Expect = 6e-12 Identities = 46/114 (40%), Positives = 55/114 (48%) Frame = -1 Query: 343 LLRRILSKRRTWVCLFISVYGXXXXXXXXXXXXXLDWYNXXXXXXXXXXXXXXXXSFGWP 164 LL +I+SKR+TWVC+F+ VYG + WY WP Sbjct: 25 LLLQIMSKRKTWVCIFVLVYGLLFTSSWNFLKSMVSWYKLRAAESSITSW--------WP 76 Query: 163 ALYASVLFGAVFGLLSMXXXXXXXXXAXXXXXXXXXXXLAFAGKPRRALVLEGR 2 ALYASVL GAVFG+LSM A LAF GKP+R LV+EGR Sbjct: 77 ALYASVLLGAVFGVLSMVAALAVVVPAVLVTWIALVGLLAFFGKPKRTLVVEGR 130