BLASTX nr result

ID: Coptis24_contig00019493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019493
         (1035 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272725.1| PREDICTED: uncharacterized protein LOC100241...   444   e-122
ref|XP_002512618.1| conserved hypothetical protein [Ricinus comm...   407   e-111
ref|XP_002329006.1| predicted protein [Populus trichocarpa] gi|2...   397   e-108
ref|XP_003552431.1| PREDICTED: uncharacterized protein LOC100781...   397   e-108
ref|XP_003533586.1| PREDICTED: uncharacterized protein LOC100815...   393   e-107

>ref|XP_002272725.1| PREDICTED: uncharacterized protein LOC100241127 [Vitis vinifera]
          Length = 640

 Score =  444 bits (1142), Expect = e-122
 Identities = 205/314 (65%), Positives = 247/314 (78%), Gaps = 1/314 (0%)
 Frame = +2

Query: 95   ACPENSIQFNATLCACKPGYFFNTTSKNCTLFTSSPND-WIIDSGVDYSISFPRTIFSFD 271
            ACP N+ ++N TLC+C PGY  N T+  C+LF  +  D W+++SGV YSISFP TIF FD
Sbjct: 6    ACPSNAFRYNGTLCSCNPGYVLNATTGACSLFWETAADGWLVNSGVGYSISFPTTIFDFD 65

Query: 272  SIKKFTQSQXXXXXXXXXXXXXXXXXXXVVRYGKLGDGNTYWFRVRWWISRLDVCYATRH 451
             IKKFTQSQ                    VR+G LGDG T WFR+RWWISRLD+ +ATRH
Sbjct: 66   KIKKFTQSQAMFLEATVVMLISWLFFCFFVRFGSLGDGRTIWFRIRWWISRLDISFATRH 125

Query: 452  WLDDQKVVKKRKTELGGTFSIASWILFIGLLAALLYQIISKRSVEVHNVRATNGPDLASF 631
            WL+DQKVVKKRKTELGGTFSIASWILFIGL AALLYQIISKRS+EVHNV+ATNGPDLASF
Sbjct: 126  WLEDQKVVKKRKTELGGTFSIASWILFIGLFAALLYQIISKRSIEVHNVKATNGPDLASF 185

Query: 632  VNDMEFNITTISSMSCSHLRGLGTLVAGTPGSIDYKASPLSIFANYSCHNTSRGPTITIR 811
            VNDMEFNITTISSM+CS+LRGLGTLV G PG +D++  PLS   +Y C NTSRGPT+ +R
Sbjct: 186  VNDMEFNITTISSMTCSNLRGLGTLVTGNPGFLDHRVLPLSTIVSYFCQNTSRGPTVILR 245

Query: 812  CINCKMVRDDLYISWHFIDLPNDPATAVGFQFNFTSKNHRDKKRMSLVSGMVKNGSSMED 991
            C  C++++D+LYISWHF+DLPN PA AVGFQF+  +K+H  KK +S V G++KNGSS++D
Sbjct: 246  CSKCQIIQDNLYISWHFVDLPNSPAAAVGFQFSLLAKSHASKKHVSSVRGLLKNGSSLDD 305

Query: 992  RPITFRGLDVNILK 1033
             P+TFRG+D N+LK
Sbjct: 306  TPVTFRGVDANVLK 319


>ref|XP_002512618.1| conserved hypothetical protein [Ricinus communis]
            gi|223548579|gb|EEF50070.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 642

 Score =  407 bits (1046), Expect = e-111
 Identities = 193/313 (61%), Positives = 237/313 (75%)
 Frame = +2

Query: 95   ACPENSIQFNATLCACKPGYFFNTTSKNCTLFTSSPNDWIIDSGVDYSISFPRTIFSFDS 274
            +CP   I +N TLCAC  G+F N T+ +CTLF +S +D   D+G+  ++SFP TIFSFDS
Sbjct: 3    SCPIGFITYNTTLCACPAGWFLNRTTNSCTLFAAS-SDIQTDTGLANTLSFPETIFSFDS 61

Query: 275  IKKFTQSQXXXXXXXXXXXXXXXXXXXVVRYGKLGDGNTYWFRVRWWISRLDVCYATRHW 454
            IKKFTQSQ                    +R+ K GDG+  WF++RWW+SRLD+C+ATRHW
Sbjct: 62   IKKFTQSQAVFLEATSVMLISWLLFCFFLRFMKFGDGSNIWFKIRWWLSRLDICFATRHW 121

Query: 455  LDDQKVVKKRKTELGGTFSIASWILFIGLLAALLYQIISKRSVEVHNVRATNGPDLASFV 634
            LDDQ+VV KRKTELGGTFSIASWILFIGL AALLYQII KRS+EVHNV+A N PDLASF 
Sbjct: 122  LDDQQVVVKRKTELGGTFSIASWILFIGLFAALLYQIILKRSIEVHNVKAINAPDLASFA 181

Query: 635  NDMEFNITTISSMSCSHLRGLGTLVAGTPGSIDYKASPLSIFANYSCHNTSRGPTITIRC 814
            ND+EFNITT+SSMSCS+LR LGTLV G+PG ID++   L   ANY+C NTS GPT+  +C
Sbjct: 182  NDIEFNITTVSSMSCSNLRDLGTLVTGSPGFIDHRVVNLIELANYTCWNTSTGPTLNFKC 241

Query: 815  INCKMVRDDLYISWHFIDLPNDPATAVGFQFNFTSKNHRDKKRMSLVSGMVKNGSSMEDR 994
             NC++ +D +YISW F+DLPN PA+AVG+ FN T++NH DK+  S VSG +KNGSS +DR
Sbjct: 242  TNCRLNKDYMYISWTFVDLPNAPASAVGYLFNLTTRNHADKRHFSFVSGTLKNGSSFDDR 301

Query: 995  PITFRGLDVNILK 1033
            P+TFRG D NILK
Sbjct: 302  PVTFRGRDPNILK 314


>ref|XP_002329006.1| predicted protein [Populus trichocarpa] gi|222839240|gb|EEE77591.1|
            predicted protein [Populus trichocarpa]
          Length = 614

 Score =  397 bits (1021), Expect = e-108
 Identities = 193/318 (60%), Positives = 235/318 (73%), Gaps = 6/318 (1%)
 Frame = +2

Query: 98   CPENSIQFNATLCACKPGYFFNTTSKNCTLFTSSPNDWIIDSGVD----YSISFPRTIFS 265
            CP  SI +N + CAC  G F N T+ +C+ F      +  D+GV+    +  SFP TIFS
Sbjct: 8    CPSKSIIYNTSRCACPTGQFLNITTNSCSYFWGRSAIYT-DTGVEVDNSFGFSFPETIFS 66

Query: 266  FDSIKKFTQSQXXXXXXXXXXXXXXXXXXXVVRYGKLGDGNTY--WFRVRWWISRLDVCY 439
            FDSIKKFTQSQ                    +R+ KL    T+  WFR+RWWISRLD+C+
Sbjct: 67   FDSIKKFTQSQAVFLEATLVMVASWLLFCFFLRFTKLEHHGTHNIWFRIRWWISRLDICF 126

Query: 440  ATRHWLDDQKVVKKRKTELGGTFSIASWILFIGLLAALLYQIISKRSVEVHNVRATNGPD 619
            ATRHWLDD+KVV KRKTELGG FSIASWILFIGL A LLYQIISKR++EVHNVRATN PD
Sbjct: 127  ATRHWLDDRKVVVKRKTELGGAFSIASWILFIGLFATLLYQIISKRTIEVHNVRATNAPD 186

Query: 620  LASFVNDMEFNITTISSMSCSHLRGLGTLVAGTPGSIDYKASPLSIFANYSCHNTSRGPT 799
            LA+FVNDMEFNITT+SSMSCS+L+GLGTLV G PG ID++ +PL+ F NY+C NTS GPT
Sbjct: 187  LAAFVNDMEFNITTVSSMSCSNLQGLGTLVTGNPGFIDHRVAPLTDFVNYTCRNTSMGPT 246

Query: 800  ITIRCINCKMVRDDLYISWHFIDLPNDPATAVGFQFNFTSKNHRDKKRMSLVSGMVKNGS 979
            +T +C  C + RD +YISW F+DLP+ PATAVGFQFN ++K+H DKK +S VSG +K+GS
Sbjct: 247  LTFKCSKCHLNRDYMYISWQFVDLPSTPATAVGFQFNLSAKDHADKKHVSFVSGTLKSGS 306

Query: 980  SMEDRPITFRGLDVNILK 1033
            + +DRP+TFRG D NILK
Sbjct: 307  TFDDRPVTFRGKDSNILK 324


>ref|XP_003552431.1| PREDICTED: uncharacterized protein LOC100781305 [Glycine max]
          Length = 617

 Score =  397 bits (1020), Expect = e-108
 Identities = 190/314 (60%), Positives = 230/314 (73%), Gaps = 1/314 (0%)
 Frame = +2

Query: 95   ACPENSIQFNATLCACKPGYFFNTTSKNCTLFTSSPNDWIIDSGVDY-SISFPRTIFSFD 271
            +CP NS  FN TLCAC PG+        C L+  + +  + DSGVDY ++SFP T+F+FD
Sbjct: 3    SCPANSFNFNTTLCACTPGHVLQHVRNTCVLYEGN-STILTDSGVDYYALSFPETLFAFD 61

Query: 272  SIKKFTQSQXXXXXXXXXXXXXXXXXXXVVRYGKLGDGNTYWFRVRWWISRLDVCYATRH 451
            +IKKFTQSQ                    +R  KLGDG   WF++RWWISRLD+C+ATRH
Sbjct: 62   TIKKFTQSQAVFLEVTLVMLLSWLLFCVFLRCTKLGDGRNVWFKIRWWISRLDICFATRH 121

Query: 452  WLDDQKVVKKRKTELGGTFSIASWILFIGLLAALLYQIISKRSVEVHNVRATNGPDLASF 631
            WLDDQKVV KRKTELGG FS+ASWILFIGL A LLYQIISKRS+EVHNVRATNGP+LASF
Sbjct: 122  WLDDQKVVTKRKTELGGAFSMASWILFIGLFAVLLYQIISKRSIEVHNVRATNGPELASF 181

Query: 632  VNDMEFNITTISSMSCSHLRGLGTLVAGTPGSIDYKASPLSIFANYSCHNTSRGPTITIR 811
            +NDMEFNITT+SSMSC++LR LG +V G PG ID +  PLS  ANYSC+N+S GPTI ++
Sbjct: 182  INDMEFNITTVSSMSCANLRNLGNIVTGNPGFIDQRVVPLSTLANYSCYNSSMGPTIALK 241

Query: 812  CINCKMVRDDLYISWHFIDLPNDPATAVGFQFNFTSKNHRDKKRMSLVSGMVKNGSSMED 991
            C NCK++ D +YISW F+DLPN PA AVGF+F  TS +   KK +S VSG +KNGS  +D
Sbjct: 242  CKNCKVIYDHMYISWQFVDLPNSPAIAVGFEFRLTSMDIA-KKHVSFVSGTLKNGSDFDD 300

Query: 992  RPITFRGLDVNILK 1033
             P+TFRG   NI+K
Sbjct: 301  SPVTFRGNQSNIVK 314


>ref|XP_003533586.1| PREDICTED: uncharacterized protein LOC100815316 [Glycine max]
          Length = 612

 Score =  393 bits (1009), Expect = e-107
 Identities = 189/313 (60%), Positives = 229/313 (73%), Gaps = 1/313 (0%)
 Frame = +2

Query: 98   CPENSIQFNATLCACKPGYFFNTTSKNCTLFTSSPNDWIIDSGVDY-SISFPRTIFSFDS 274
            CP NS  FN TLCAC PG+        C L+  + +  + D+GVDY ++SFP T+F+FD 
Sbjct: 4    CPANSFNFNTTLCACTPGHVLQHVRNTCVLYEGN-STILTDTGVDYYALSFPETLFAFDR 62

Query: 275  IKKFTQSQXXXXXXXXXXXXXXXXXXXVVRYGKLGDGNTYWFRVRWWISRLDVCYATRHW 454
            IKKFTQSQ                    +R  KLGDG   WF++RWWISRLD+C+ATRHW
Sbjct: 63   IKKFTQSQAVFLEATLVMLLSWLLFCVFLRCTKLGDGRNVWFKIRWWISRLDICFATRHW 122

Query: 455  LDDQKVVKKRKTELGGTFSIASWILFIGLLAALLYQIISKRSVEVHNVRATNGPDLASFV 634
            LDDQKVV KRKTELGG FSIASWILFIGL AALLYQIISKRS+EVHNVRATNG +LAS+ 
Sbjct: 123  LDDQKVVTKRKTELGGAFSIASWILFIGLFAALLYQIISKRSIEVHNVRATNGQELASYF 182

Query: 635  NDMEFNITTISSMSCSHLRGLGTLVAGTPGSIDYKASPLSIFANYSCHNTSRGPTITIRC 814
            NDMEFNITT+SSMSC++LR LG +V G PG ID +  PLS  ANYSC+N+S GPT+  +C
Sbjct: 183  NDMEFNITTVSSMSCANLRNLGNVVTGNPGFIDQRVVPLSTLANYSCYNSSTGPTVVFKC 242

Query: 815  INCKMVRDDLYISWHFIDLPNDPATAVGFQFNFTSKNHRDKKRMSLVSGMVKNGSSMEDR 994
             NCK++ D +YISW F+DLPN+PATAVGF+F  TS +   KK +S VSG +KNGS+ ++ 
Sbjct: 243  KNCKVIYDHMYISWQFVDLPNNPATAVGFEFKLTSMDIA-KKHVSFVSGTLKNGSNFDNS 301

Query: 995  PITFRGLDVNILK 1033
            P+TFRG   NILK
Sbjct: 302  PVTFRGKQSNILK 314


Top