BLASTX nr result

ID: Coptis24_contig00019491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019491
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269977.2| PREDICTED: histidine kinase 2-like [Vitis vi...    82   1e-13
emb|CBI28424.3| unnamed protein product [Vitis vinifera]               79   2e-12
emb|CAN76309.1| hypothetical protein VITISV_028333 [Vitis vinifera]    71   3e-10
ref|XP_002531702.1| histidine kinase 1, 2, 3 plant, putative [Ri...    64   5e-08
ref|XP_003531201.1| PREDICTED: histidine kinase 3-like [Glycine ...    58   3e-06

>ref|XP_002269977.2| PREDICTED: histidine kinase 2-like [Vitis vinifera]
          Length = 1272

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 60/172 (34%), Positives = 88/172 (51%), Gaps = 11/172 (6%)
 Frame = +1

Query: 388 LVKMGLNWKLFSPKNRISWRLKKEKFQR--------FRWSRTYILFCGYFL*VVGFLLFP 543
           L+KM LN KL     R+   LK +K +          +W R ++L     + ++G + F 
Sbjct: 25  LLKMSLNCKLSGFSGRLPANLKLKKSKEPLHGSNCVRKWRRKFLLLWLLGV-IIGLICFL 83

Query: 544 PNAN-GVSERKHRGIELLWEEKARIL--QARLSKDRLIFMASFFVRLEQKQSLACLDEVG 714
              N G   RK +  +L  EEKARIL     +SK++L  +AS F   +Q  SL C  E G
Sbjct: 84  SVLNAGALSRKEKTPDLC-EEKARILLEHFNVSKNQLHSLASLFAESDQIASLECTKEAG 142

Query: 715 LQMPSTDGIACALEELSSETVRFETWQKWSTKKLESMDQCPVQHNSVPEKLE 870
            +MP  + IACAL+   S+   FE     + + LE  DQCPV+  ++P KL+
Sbjct: 143 FEMPPGNAIACALKVPCSQNQEFEKQHDQAAESLEPNDQCPVRDENIPGKLD 194


>emb|CBI28424.3| unnamed protein product [Vitis vinifera]
          Length = 1203

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 58/169 (34%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
 Frame = +1

Query: 397 MGLNWKLFSPKNRISWRLKKEKFQR--------FRWSRTYILFCGYFL*VVGFLLFPPNA 552
           M LN KL     R+   LK +K +          +W R ++L     + ++G + F    
Sbjct: 1   MSLNCKLSGFSGRLPANLKLKKSKEPLHGSNCVRKWRRKFLLLWLLGV-IIGLICFLSVL 59

Query: 553 N-GVSERKHRGIELLWEEKARIL--QARLSKDRLIFMASFFVRLEQKQSLACLDEVGLQM 723
           N G   RK +  +L  EEKARIL     +SK++L  +AS F   +Q  SL C  E G +M
Sbjct: 60  NAGALSRKEKTPDLC-EEKARILLEHFNVSKNQLHSLASLFAESDQIASLECTKEAGFEM 118

Query: 724 PSTDGIACALEELSSETVRFETWQKWSTKKLESMDQCPVQHNSVPEKLE 870
           P  + IACAL+   S+   FE     + + LE  DQCPV+  ++P KL+
Sbjct: 119 PPGNAIACALKVPCSQNQEFEKQHDQAAESLEPNDQCPVRDENIPGKLD 167


>emb|CAN76309.1| hypothetical protein VITISV_028333 [Vitis vinifera]
          Length = 1400

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 61/197 (30%), Positives = 89/197 (45%), Gaps = 36/197 (18%)
 Frame = +1

Query: 388 LVKMGLNWKLFSPKNRISWRLKKEKFQR--------FRWSRTYILFCGYFL*VVGFLLFP 543
           L+KM LN KL     R+   LK +K +          +W R ++L     + ++G + F 
Sbjct: 39  LLKMSLNCKLSGFSGRLPANLKLKKSKEPLHGSNCVRKWRRKFLLLWLLGV-IIGLICFL 97

Query: 544 PNAN-GVSERKHRGIELLWEEKARIL--QARLSKDRLIFMASFFVRLEQKQ--------- 687
              N G   RK +  +L  EEKARIL     +SK++L  +AS F   +Q Q         
Sbjct: 98  XVLNAGALSRKEKTPDLC-EEKARILLEHFNVSKNQLHSLASLFAESDQGQWDIDHKANV 156

Query: 688 ----------------SLACLDEVGLQMPSTDGIACALEELSSETVRFETWQKWSTKKLE 819
                           SL C  E G +MP  + IACAL+   S+   FE     + + LE
Sbjct: 157 EFFKYWQKKYKDGKIASLECTKEAGFEMPPGNAIACALKVPCSQNQEFEKQHDQAAESLE 216

Query: 820 SMDQCPVQHNSVPEKLE 870
             DQCPV+  ++P KL+
Sbjct: 217 PNDQCPVRDENIPGKLD 233


>ref|XP_002531702.1| histidine kinase 1, 2, 3 plant, putative [Ricinus communis]
           gi|223528678|gb|EEF30693.1| histidine kinase 1, 2, 3
           plant, putative [Ricinus communis]
          Length = 922

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
 Frame = +1

Query: 598 EEKARIL--QARLSKDRLIFMASFFVRLEQKQSLACLDEVGLQMPSTDGIACALEELSSE 771
           EEKA++L     +SK +L  + S F   +QK      +    + P T G+A AL+ L SE
Sbjct: 10  EEKAQVLLQHFNVSKSQLQALVSLFSESDQKTFGEYTERTAFERPLTSGVAYALKVLHSE 69

Query: 772 TVRFETWQKWSTKKLESMDQCPVQHNSVPEKLEGTSVKGELVPTVLSQ 915
             +FE    W+ +K+E+ DQ  VQ + +PEKL+   ++ E  P + SQ
Sbjct: 70  REQFEKKHGWTIRKMETEDQTLVQ-DCIPEKLDPAPIQDEYAPVIFSQ 116


>ref|XP_003531201.1| PREDICTED: histidine kinase 3-like [Glycine max]
          Length = 1030

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 41/166 (24%), Positives = 84/166 (50%), Gaps = 13/166 (7%)
 Frame = +1

Query: 457 EKFQRFRWSRTYILFC-GYFL*VVGFLLFPPNANGVSERKHRGIELLWEEKARILQAR-- 627
           +K +R  W +  + +  G+F  +V   +F   ++  +E++   +  + +E+AR+LQ +  
Sbjct: 81  KKVKRALWRKLLLTWVVGWF--IVSLRIFCYMSSQGTEKRKETLASMCDERARMLQDQFN 138

Query: 628 LSKDRLIFMASFFVRLEQKQSLACLDE---------VGLQMPSTDGIACALEELSSETVR 780
           +S + +  M+         +S + +D+            + P T G+A A+  L SE  +
Sbjct: 139 VSMNHIQAMSILISTFHHAKSPSAIDQKTFAKYTERTAFERPLTSGVAYAVRVLHSEREQ 198

Query: 781 FETWQKWSTKKLESMDQCPVQHNS-VPEKLEGTSVKGELVPTVLSQ 915
           FE  Q W+ K++++++Q PV  +   PE LE + V+ E  P + +Q
Sbjct: 199 FEKQQGWTIKRMDTLEQNPVHKDDYAPEALEPSPVQEEYAPVIFAQ 244


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