BLASTX nr result

ID: Coptis24_contig00019485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019485
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526507.1| malic enzyme, putative [Ricinus communis] gi...   119   2e-25
ref|XP_002302483.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002265765.1| PREDICTED: NAD-dependent malic enzyme 62 kDa...   113   1e-23
ref|XP_002326881.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
sp|P37221.1|MAOM_SOLTU RecName: Full=NAD-dependent malic enzyme ...   108   4e-22

>ref|XP_002526507.1| malic enzyme, putative [Ricinus communis]
           gi|223534182|gb|EEF35898.1| malic enzyme, putative
           [Ricinus communis]
          Length = 626

 Score =  119 bits (299), Expect = 2e-25
 Identities = 60/96 (62%), Positives = 71/96 (73%), Gaps = 3/96 (3%)
 Frame = +2

Query: 2   NFSHQLRLSCSSLGK---RLRNQMSMFERRSFTSTEGSRPSIVHKRSIDILHDPWFNKGT 172
           NFS+Q+R S S + +   RL N   + + RSFT+TEG RP+IVHKRS+DILHDPWFNKGT
Sbjct: 3   NFSNQIRASASLIKRLKDRLANPALLNQSRSFTTTEGHRPTIVHKRSLDILHDPWFNKGT 62

Query: 173 AFSMTEXXXXXXXXXXPPNVMSSQQQIERFMVDLKR 280
           AFSMTE          PPN+MSS+QQIERFM DLKR
Sbjct: 63  AFSMTERDRLDLRGLLPPNIMSSEQQIERFMADLKR 98


>ref|XP_002302483.1| predicted protein [Populus trichocarpa] gi|222844209|gb|EEE81756.1|
           predicted protein [Populus trichocarpa]
          Length = 627

 Score =  119 bits (297), Expect = 3e-25
 Identities = 64/98 (65%), Positives = 74/98 (75%), Gaps = 5/98 (5%)
 Frame = +2

Query: 2   NFSHQLRLSCSSLGKRLRNQMS-----MFERRSFTSTEGSRPSIVHKRSIDILHDPWFNK 166
           NFS+Q+R S SSL KRL+ +M+     M   RSFT+ EG RP+IVHKRS+DILHDPWFNK
Sbjct: 3   NFSNQIRAS-SSLIKRLQQRMTNPAALMQATRSFTTLEGHRPTIVHKRSLDILHDPWFNK 61

Query: 167 GTAFSMTEXXXXXXXXXXPPNVMSSQQQIERFMVDLKR 280
           GTAFSMTE          PPNVMSS+QQI+RFMVDLKR
Sbjct: 62  GTAFSMTERDRLDIRGLLPPNVMSSEQQIQRFMVDLKR 99


>ref|XP_002265765.1| PREDICTED: NAD-dependent malic enzyme 62 kDa isoform, mitochondrial
           [Vitis vinifera] gi|297734678|emb|CBI16729.3| unnamed
           protein product [Vitis vinifera]
          Length = 625

 Score =  113 bits (283), Expect = 1e-23
 Identities = 60/96 (62%), Positives = 71/96 (73%), Gaps = 3/96 (3%)
 Frame = +2

Query: 2   NFSHQLRLSCSSLGKRLRNQMS---MFERRSFTSTEGSRPSIVHKRSIDILHDPWFNKGT 172
           NF  Q++L  SSL +RL+++ S   +  RRSFT+TEG RPS+VHKRS+DILHDPWFNKGT
Sbjct: 3   NFCRQIKLP-SSLIRRLKHRSSNSMLSGRRSFTTTEGHRPSLVHKRSLDILHDPWFNKGT 61

Query: 173 AFSMTEXXXXXXXXXXPPNVMSSQQQIERFMVDLKR 280
           AFSMTE          PP VMS + QIERFMVDLKR
Sbjct: 62  AFSMTERDRLDLRGLLPPTVMSPEMQIERFMVDLKR 97


>ref|XP_002326881.1| predicted protein [Populus trichocarpa] gi|222835196|gb|EEE73631.1|
           predicted protein [Populus trichocarpa]
          Length = 627

 Score =  112 bits (280), Expect = 3e-23
 Identities = 60/98 (61%), Positives = 71/98 (72%), Gaps = 5/98 (5%)
 Frame = +2

Query: 2   NFSHQLRLSCSSLGKRLRNQMS-----MFERRSFTSTEGSRPSIVHKRSIDILHDPWFNK 166
           NFS+Q+R S SSL KRL+ +M+     M   R FT+ EG RP+IVHKRS+DILHDPWFNK
Sbjct: 3   NFSNQIRAS-SSLIKRLKQRMTNPAALMQATRHFTTLEGHRPTIVHKRSLDILHDPWFNK 61

Query: 167 GTAFSMTEXXXXXXXXXXPPNVMSSQQQIERFMVDLKR 280
           GTAFSMTE          PPNVM+S+QQI+RF  DLKR
Sbjct: 62  GTAFSMTERDRLDLRGLLPPNVMTSEQQIQRFAADLKR 99


>sp|P37221.1|MAOM_SOLTU RecName: Full=NAD-dependent malic enzyme 62 kDa isoform,
           mitochondrial; Short=NAD-ME; Flags: Precursor
           gi|438249|emb|CAA80559.1| malate dehydrogenase [Solanum
           tuberosum]
          Length = 626

 Score =  108 bits (270), Expect = 4e-22
 Identities = 58/96 (60%), Positives = 69/96 (71%), Gaps = 4/96 (4%)
 Frame = +2

Query: 5   FSHQLRLSCSSLGKRLRNQMSMF----ERRSFTSTEGSRPSIVHKRSIDILHDPWFNKGT 172
           FS+Q+RLS S+L KRL  +++        R+FT+TEG RP+IVHKRS+DILHDPWFNKGT
Sbjct: 4   FSNQMRLS-STLLKRLHQRVAAAVNSSSSRNFTTTEGHRPTIVHKRSLDILHDPWFNKGT 62

Query: 173 AFSMTEXXXXXXXXXXPPNVMSSQQQIERFMVDLKR 280
           AFS TE          PPNVMS +QQI RFM DLKR
Sbjct: 63  AFSFTERDRLHIRGLLPPNVMSFEQQIARFMADLKR 98


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