BLASTX nr result

ID: Coptis24_contig00019484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019484
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P0DI60.1|CSPL_HELAN RecName: Full=CASP-like protein 1               97   1e-18
sp|P0DI53.1|CASP3_MIMGU RecName: Full=Casparian strip membrane p...    93   2e-17
ref|XP_002273638.1| PREDICTED: casparian strip membrane protein ...    93   3e-17
ref|XP_002530531.1| conserved hypothetical protein [Ricinus comm...    91   1e-16
sp|P0DI30.1|CASP1_TRIPD RecName: Full=Casparian strip membrane p...    91   1e-16

>sp|P0DI60.1|CSPL_HELAN RecName: Full=CASP-like protein 1
          Length = 212

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 46/72 (63%), Positives = 53/72 (73%)
 Frame = +2

Query: 2   LSLPFSIIGIVRPQIVGARLLLLIFDTVMXXXXXXXXXXXXXXXYLAHNGNSTANWIAIC 181
           LSLPFSI+ IVRP I+GARL+LL+FDTV                YLAHNGNS ANW+AIC
Sbjct: 115 LSLPFSILCIVRPHILGARLMLLVFDTVAVPLVTAAASAAASIVYLAHNGNSDANWVAIC 174

Query: 182 QQFNDFCQRISG 217
           +QFNDFCQR+SG
Sbjct: 175 RQFNDFCQRVSG 186


>sp|P0DI53.1|CASP3_MIMGU RecName: Full=Casparian strip membrane protein 3
          Length = 207

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/72 (61%), Positives = 48/72 (66%)
 Frame = +2

Query: 2   LSLPFSIIGIVRPQIVGARLLLLIFDTVMXXXXXXXXXXXXXXXYLAHNGNSTANWIAIC 181
           LSLPFSI+ IVRP + G +LLLLI DTV+               YLAHNGNS  NW AIC
Sbjct: 110 LSLPFSIVAIVRPHVTGVKLLLLILDTVLVAFTTAAAASAAAIVYLAHNGNSNTNWFAIC 169

Query: 182 QQFNDFCQRISG 217
           QQFNDFCQR SG
Sbjct: 170 QQFNDFCQRTSG 181


>ref|XP_002273638.1| PREDICTED: casparian strip membrane protein VIT_06s0080g00840
           [Vitis vinifera] gi|226713612|sp|A7QF77.1|CASP1_VITVI
           RecName: Full=Casparian strip membrane protein
           VIT_06s0080g00840 gi|296084880|emb|CBI28289.3| unnamed
           protein product [Vitis vinifera]
          Length = 201

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/72 (62%), Positives = 51/72 (70%)
 Frame = +2

Query: 2   LSLPFSIIGIVRPQIVGARLLLLIFDTVMXXXXXXXXXXXXXXXYLAHNGNSTANWIAIC 181
           LSLPFSI+ IVRP  +GARLLL+I DTVM               YLAHNGNS ANW+AIC
Sbjct: 104 LSLPFSIVCIVRPHAMGARLLLVICDTVMVALTIAAAAAAAAIVYLAHNGNSNANWVAIC 163

Query: 182 QQFNDFCQRISG 217
           QQF+DFCQ +SG
Sbjct: 164 QQFDDFCQSVSG 175


>ref|XP_002530531.1| conserved hypothetical protein [Ricinus communis]
           gi|288559168|sp|B9SX12.1|CASP3_RICCO RecName:
           Full=Casparian strip membrane protein RCOM_1259250
           gi|223529935|gb|EEF31863.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 200

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/72 (56%), Positives = 49/72 (68%)
 Frame = +2

Query: 2   LSLPFSIIGIVRPQIVGARLLLLIFDTVMXXXXXXXXXXXXXXXYLAHNGNSTANWIAIC 181
           LSLPFS++ I+RP  VG RLLLLI DTV                YLAHNGN +ANW+A+C
Sbjct: 103 LSLPFSVVAIIRPHAVGIRLLLLILDTVALTLNTAAAAAAAAIVYLAHNGNQSANWLAVC 162

Query: 182 QQFNDFCQRISG 217
           QQF DFCQ++SG
Sbjct: 163 QQFGDFCQKVSG 174


>sp|P0DI30.1|CASP1_TRIPD RecName: Full=Casparian strip membrane protein 1
          Length = 208

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/72 (61%), Positives = 47/72 (65%)
 Frame = +2

Query: 2   LSLPFSIIGIVRPQIVGARLLLLIFDTVMXXXXXXXXXXXXXXXYLAHNGNSTANWIAIC 181
           LSLPFSI  IVRP     +LLL+IFDTVM               YLAHNGNS  NW AIC
Sbjct: 111 LSLPFSIATIVRPHAAAIKLLLIIFDTVMVAFTAAAAAAAAAIVYLAHNGNSKTNWFAIC 170

Query: 182 QQFNDFCQRISG 217
           QQFNDFCQR+SG
Sbjct: 171 QQFNDFCQRVSG 182


Top