BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019478
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38027.3| unnamed protein product [Vitis vinifera]              108   6e-22
ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257...   108   6e-22
ref|XP_002512958.1| RNA-binding protein, putative [Ricinus commu...   105   4e-21
ref|XP_004148553.1| PREDICTED: RNA-binding protein 28-like [Cucu...   104   9e-21
ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20

>emb|CBI38027.3| unnamed protein product [Vitis vinifera]
          Length = 918

 Score =  108 bits (269), Expect = 6e-22
 Identities = 49/64 (76%), Positives = 59/64 (92%)
 Frame = -3

Query: 193 LAQDGCRMEALAVLYESVRAARASVGVLHQQKVKGGLVWARQLGGEGSKTQKWKLIVRNL 14
           L+QDGC+++A AVLY SV+ A ASV +LHQ+++KGG+VWARQLGGEGSKTQKWKLIVRNL
Sbjct: 211 LSQDGCKIDASAVLYSSVKEAHASVAMLHQKEIKGGIVWARQLGGEGSKTQKWKLIVRNL 270

Query: 13  PFKA 2
           PFKA
Sbjct: 271 PFKA 274



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/51 (62%), Positives = 38/51 (74%)
 Frame = -2

Query: 482 GHSKGAAAEDADRAVELKNGALISGRKIRVKHAMHRPPNEQRKAKSNQDSI 330
           G  + A  EDA+RA+ELKNG+ I GRKI VK AMHR P EQR++K NQD I
Sbjct: 63  GFVQFAVKEDANRAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSKENQDDI 113


>ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera]
          Length = 972

 Score =  108 bits (269), Expect = 6e-22
 Identities = 49/64 (76%), Positives = 59/64 (92%)
 Frame = -3

Query: 193 LAQDGCRMEALAVLYESVRAARASVGVLHQQKVKGGLVWARQLGGEGSKTQKWKLIVRNL 14
           L+QDGC+++A AVLY SV+ A ASV +LHQ+++KGG+VWARQLGGEGSKTQKWKLIVRNL
Sbjct: 230 LSQDGCKIDASAVLYSSVKEAHASVAMLHQKEIKGGIVWARQLGGEGSKTQKWKLIVRNL 289

Query: 13  PFKA 2
           PFKA
Sbjct: 290 PFKA 293



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 5/58 (8%)
 Frame = -2

Query: 482 GHSKGAAAEDADRAVELKNGALISGRKIRVKHAMHRPPNEQRKAKSNQ-----DSIKT 324
           G  + A  EDA+RA+ELKNG+ I GRKI VK AMHR P EQR++K NQ     D IKT
Sbjct: 63  GFVQFAVKEDANRAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSKENQAVHSDDIIKT 120


>ref|XP_002512958.1| RNA-binding protein, putative [Ricinus communis]
           gi|223547969|gb|EEF49461.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 916

 Score =  105 bits (262), Expect = 4e-21
 Identities = 48/64 (75%), Positives = 57/64 (89%)
 Frame = -3

Query: 193 LAQDGCRMEALAVLYESVRAARASVGVLHQQKVKGGLVWARQLGGEGSKTQKWKLIVRNL 14
           LAQDGCR +  A+LY SV+ AR SV +LHQ++++GG+VWARQLGGEGSKTQKWKLIVRNL
Sbjct: 214 LAQDGCRSDVSAILYTSVKEARLSVRMLHQKEIRGGIVWARQLGGEGSKTQKWKLIVRNL 273

Query: 13  PFKA 2
           PFKA
Sbjct: 274 PFKA 277



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
 Frame = -2

Query: 482 GHSKGAAAEDADRAVELKNGALISGRKIRVKHAMHRPPNEQRKAKSNQ-----DSIKTXX 318
           G  + A  EDA+RA+ELK+G+ +SG+KI VKHAM R P +QR+AK+ Q      + KT  
Sbjct: 67  GFVQFAIKEDANRAIELKDGSSVSGQKIFVKHAMSRAPLDQRRAKAAQVVESDGAAKTEN 126

Query: 317 XXXXXXXXXXXXXSGQSKV-IRKTKALPIELTDKEDCSDKQK 195
                             +  RK   L  EL D+E+CS+KQ+
Sbjct: 127 DTTRVDKYASKLTEAVKHLKPRKPVKLSSELVDEENCSEKQR 168


>ref|XP_004148553.1| PREDICTED: RNA-binding protein 28-like [Cucumis sativus]
          Length = 966

 Score =  104 bits (259), Expect = 9e-21
 Identities = 45/64 (70%), Positives = 60/64 (93%)
 Frame = -3

Query: 193 LAQDGCRMEALAVLYESVRAARASVGVLHQQKVKGGLVWARQLGGEGSKTQKWKLIVRNL 14
           + +DGC+M+  AVL++SV++ARA+V +LHQ+++KGG+VWARQLGGEGSKTQKWK+IVRNL
Sbjct: 243 ILRDGCKMDVSAVLFDSVKSARAAVAILHQKEMKGGVVWARQLGGEGSKTQKWKVIVRNL 302

Query: 13  PFKA 2
           PFKA
Sbjct: 303 PFKA 306



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/48 (62%), Positives = 36/48 (75%)
 Frame = -2

Query: 482 GHSKGAAAEDADRAVELKNGALISGRKIRVKHAMHRPPNEQRKAKSNQ 339
           G  + A AEDA+RA++LKNG    GRKI VKHAMHR P EQR++K NQ
Sbjct: 67  GFVQFAVAEDANRAIQLKNGLSFEGRKITVKHAMHRAPLEQRRSKENQ 114


>ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|222850181|gb|EEE87728.1|
           predicted protein [Populus trichocarpa]
          Length = 974

 Score =  102 bits (255), Expect = 3e-20
 Identities = 47/64 (73%), Positives = 56/64 (87%)
 Frame = -3

Query: 193 LAQDGCRMEALAVLYESVRAARASVGVLHQQKVKGGLVWARQLGGEGSKTQKWKLIVRNL 14
           L QDGCR  A AVL+ SV+ AR+SV +LHQ+++KGG+VWARQLGGEG KTQKWKLI+RNL
Sbjct: 228 LEQDGCRSGASAVLFTSVKEARSSVAMLHQKEIKGGIVWARQLGGEGCKTQKWKLIIRNL 287

Query: 13  PFKA 2
           PFKA
Sbjct: 288 PFKA 291



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 24/120 (20%)
 Frame = -2

Query: 482 GHSKGAAAEDADRAVELKNGALISGRKIRVKHAMHRPPNEQRKAKSNQ-------DSIKT 324
           G  + A  +DA+RA+E+KNG+ + GRKI VKHAMHR   EQR+AK+ Q       D+ KT
Sbjct: 63  GFVQFALKDDANRAIEIKNGSSVGGRKIAVKHAMHRASLEQRRAKAAQGQGQVQDDATKT 122

Query: 323 XXXXXXXXXXXXXXXSG-----------------QSKVIRKTKALPIELTDKEDCSDKQK 195
                                             + +  RK   L  +LTDKE+CS+KQ+
Sbjct: 123 IDEKGSVASKPEKHVLNVLESGWELWYILSCMLRKPREPRKPAKLVTDLTDKENCSEKQR 182