BLASTX nr result

ID: Coptis24_contig00019475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019475
         (1038 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64818.1| hypothetical protein VITISV_020980 [Vitis vinifera]    78   4e-12
emb|CAN74437.1| hypothetical protein VITISV_022952 [Vitis vinifera]    76   2e-11
ref|XP_002533344.1| protein with unknown function [Ricinus commu...    65   4e-08
emb|CBI15799.3| unnamed protein product [Vitis vinifera]               62   3e-07
ref|XP_002276020.1| PREDICTED: probable LRR receptor-like serine...    62   3e-07

>emb|CAN64818.1| hypothetical protein VITISV_020980 [Vitis vinifera]
          Length = 1001

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 61/199 (30%), Positives = 88/199 (44%), Gaps = 7/199 (3%)
 Frame = -1

Query: 1038 LSTIMAERLQNLENLSLEECDVMEKLILSKREEEIATPSDSSTRHIIFCNTEKSPSLPTF 859
            LS    E + +L   S+EEC+ +E +I       I        RH+   N  K  S+   
Sbjct: 797  LSDFGIENMNDLFICSIEECNEIETIIDGTG---ITQSVLKCLRHLHIKNVLKLKSIWQG 853

Query: 858  P-------NLRHLTIYKCKLLENVFSFGVARDLQQLKDIMIERCDNLKEIIAREEENVNE 700
            P        LR LT+ KC  LEN+FS G+ + L +L+D+ +E CD ++EII   E N  E
Sbjct: 854  PVHAGSLTRLRTLTLVKCPRLENIFSNGIIQQLSKLEDLRVEECDEIQEIIMESENNGLE 913

Query: 699  VVDHRIXXXXXXXXXXXXXXXXXXLYQGDLPISCPLSYIEVIGCPNLKKLPLVAQAVSHL 520
                                    ++ GD      L  IE+  CP LK+LP      + L
Sbjct: 914  ----SNQLPRLKTLTLLNLXTLTSIWGGDPLEWRSLQVIEISMCPELKRLPFNNDNATKL 969

Query: 519  IEIWGETQWFGGLIWEDEG 463
              I G+  W+  L W+D+G
Sbjct: 970  RSIKGQRAWWEALXWKDDG 988


>emb|CAN74437.1| hypothetical protein VITISV_022952 [Vitis vinifera]
          Length = 729

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 59/199 (29%), Positives = 89/199 (44%), Gaps = 7/199 (3%)
 Frame = -1

Query: 1038 LSTIMAERLQNLENLSLEECDVMEKLILSKREEEIATPSDSSTRHIIFCNTEKSPSLPTF 859
            LS    E +  L   S+EEC+ +E +I       I        RH+   N  K  S+   
Sbjct: 525  LSDFGIENMNELLICSIEECNEIETIIDGTG---ITQSVLEYLRHLHIKNVLKLKSIWQG 581

Query: 858  P-------NLRHLTIYKCKLLENVFSFGVARDLQQLKDIMIERCDNLKEIIAREEENVNE 700
            P        LR LT+ KC  LEN+FS G+ + L +L+D+ +E CD ++EII   E +   
Sbjct: 582  PVHAGSLTRLRTLTLVKCPQLENIFSNGIIQQLSKLEDLRVEECDKIQEIIMESEND--G 639

Query: 699  VVDHRIXXXXXXXXXXXXXXXXXXLYQGDLPISCPLSYIEVIGCPNLKKLPLVAQAVSHL 520
            +V +++                   + GD      L  IE+  CP LK+LP      + L
Sbjct: 640  LVSNQLPRLKTLTLLNLQTLTSI--WGGDSLEWRSLQVIEISMCPKLKRLPFNNDNATKL 697

Query: 519  IEIWGETQWFGGLIWEDEG 463
              I G+  W+  L W+D+G
Sbjct: 698  RSIKGQRAWWEALEWKDDG 716


>ref|XP_002533344.1| protein with unknown function [Ricinus communis]
           gi|223526824|gb|EEF29043.1| protein with unknown
           function [Ricinus communis]
          Length = 844

 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = -3

Query: 229 SWNKGDPCTSNWAAVLCFNFTHNDGYLHVRELE 131
           +WN+GDPCTSNW  VLCFN T +DGYLHVREL+
Sbjct: 55  NWNRGDPCTSNWTGVLCFNATMDDGYLHVRELQ 87


>emb|CBI15799.3| unnamed protein product [Vitis vinifera]
          Length = 960

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 24/38 (63%), Positives = 28/38 (73%)
 Frame = -3

Query: 229 SWNKGDPCTSNWAAVLCFNFTHNDGYLHVRELEY*QKH 116
           +WN+GDPCTS W  VLCFN T ND YLHV+EL+    H
Sbjct: 63  NWNRGDPCTSEWTGVLCFNTTMNDSYLHVKELQLLNMH 100


>ref|XP_002276020.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g06840-like [Vitis vinifera]
          Length = 959

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 24/38 (63%), Positives = 28/38 (73%)
 Frame = -3

Query: 229 SWNKGDPCTSNWAAVLCFNFTHNDGYLHVRELEY*QKH 116
           +WN+GDPCTS W  VLCFN T ND YLHV+EL+    H
Sbjct: 63  NWNRGDPCTSEWTGVLCFNTTMNDSYLHVKELQLLNMH 100


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