BLASTX nr result

ID: Coptis24_contig00019474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019474
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263664.1| PREDICTED: ankyrin-1 [Vitis vinifera] gi|296...    70   8e-12
dbj|BAC23047.1| ankyrin-like protein [Solanum tuberosum]               69   2e-11
ref|XP_002531277.1| ankyrin repeat-containing protein, putative ...    72   3e-11
ref|XP_002319644.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
gb|ACN40446.1| unknown [Picea sitchensis]                              70   2e-10

>ref|XP_002263664.1| PREDICTED: ankyrin-1 [Vitis vinifera] gi|296087918|emb|CBI35201.3|
           unnamed protein product [Vitis vinifera]
          Length = 458

 Score = 70.1 bits (170), Expect(2) = 8e-12
 Identities = 33/58 (56%), Positives = 43/58 (74%)
 Frame = +2

Query: 107 IANVKDLSGRGALHLAAHKGKLNVCKYLLEELKLDVNERDMEGGTALCYASDHGHLST 280
           +A+VKD + RGALH AA +G+  VCKYLLEELKLDV+ +D +G T L +A+  GH  T
Sbjct: 47  VADVKDANKRGALHFAAREGRTEVCKYLLEELKLDVDAKDEDGETPLLHAARQGHTVT 104



 Score = 24.6 bits (52), Expect(2) = 8e-12
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 6   RSKVDQTT*SCFS*NLRRIKKLGKELDNGK 95
           R+KV Q   +  + NL   KKL  +LD+GK
Sbjct: 12  RNKVQQFLNAACTGNLDLFKKLAAQLDDGK 41


>dbj|BAC23047.1| ankyrin-like protein [Solanum tuberosum]
          Length = 467

 Score = 68.9 bits (167), Expect(2) = 2e-11
 Identities = 33/59 (55%), Positives = 45/59 (76%)
 Frame = +2

Query: 107 IANVKDLSGRGALHLAAHKGKLNVCKYLLEELKLDVNERDMEGGTALCYASDHGHLSTV 283
           +A+VKD + RGAL  AA + K+ +CKYL+EELK+DVNE+D EG T L +A+  GH +TV
Sbjct: 47  VADVKDGNKRGALIFAARESKIELCKYLVEELKVDVNEKDDEGETPLLHAAREGHTATV 105



 Score = 24.6 bits (52), Expect(2) = 2e-11
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 6   RSKVDQTT*SCFS*NLRRIKKLGKELDNGK 95
           R KV++   +  S ++   KKL K+LD+GK
Sbjct: 12  REKVNKFLKAACSGDIELFKKLAKQLDDGK 41


>ref|XP_002531277.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223529110|gb|EEF31090.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 463

 Score = 72.4 bits (176), Expect(2) = 3e-11
 Identities = 33/62 (53%), Positives = 46/62 (74%)
 Frame = +2

Query: 95  MNRAIANVKDLSGRGALHLAAHKGKLNVCKYLLEELKLDVNERDMEGGTALCYASDHGHL 274
           M + +A++KD + RGALH AA +GK  VCKYLLE+LKLDV+ +D +G T L +A+  GH 
Sbjct: 43  MAKTVADIKDANKRGALHFAAREGKTEVCKYLLEDLKLDVDTKDDDGETPLIHAARQGHT 102

Query: 275 ST 280
           +T
Sbjct: 103 AT 104



 Score = 20.4 bits (41), Expect(2) = 3e-11
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 6   RSKVDQTT*SCFS*NLRRIKKLGKELDNGK 95
           R KV     +  + NL  +K +  +LD+GK
Sbjct: 12  RQKVQNFLTAACTGNLDLLKNIAAQLDDGK 41


>ref|XP_002319644.1| predicted protein [Populus trichocarpa] gi|222858020|gb|EEE95567.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/62 (50%), Positives = 46/62 (74%)
 Frame = +2

Query: 95  MNRAIANVKDLSGRGALHLAAHKGKLNVCKYLLEELKLDVNERDMEGGTALCYASDHGHL 274
           M+  +A++KD + RGALH AA +G+  VCKYL+EELKLDV+ +D +G T + +A+  GH 
Sbjct: 35  MSNTVADIKDANKRGALHFAAREGQTEVCKYLIEELKLDVDTKDEDGETPIIHAARQGHT 94

Query: 275 ST 280
           +T
Sbjct: 95  AT 96


>gb|ACN40446.1| unknown [Picea sitchensis]
          Length = 460

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/68 (52%), Positives = 46/68 (67%)
 Frame = +2

Query: 77  GVGQWEMNRAIANVKDLSGRGALHLAAHKGKLNVCKYLLEELKLDVNERDMEGGTALCYA 256
           G GQ ++   IA VKD +GRGALH AA  G+  +CKYLLE+L L V+ RD +G T L +A
Sbjct: 43  GDGQ-DLAETIAAVKDANGRGALHFAARDGRTEICKYLLEDLNLCVDSRDDDGETPLIHA 101

Query: 257 SDHGHLST 280
           +  GHL T
Sbjct: 102 TRQGHLQT 109


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