BLASTX nr result
ID: Coptis24_contig00019474
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019474 (284 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263664.1| PREDICTED: ankyrin-1 [Vitis vinifera] gi|296... 70 8e-12 dbj|BAC23047.1| ankyrin-like protein [Solanum tuberosum] 69 2e-11 ref|XP_002531277.1| ankyrin repeat-containing protein, putative ... 72 3e-11 ref|XP_002319644.1| predicted protein [Populus trichocarpa] gi|2... 71 8e-11 gb|ACN40446.1| unknown [Picea sitchensis] 70 2e-10 >ref|XP_002263664.1| PREDICTED: ankyrin-1 [Vitis vinifera] gi|296087918|emb|CBI35201.3| unnamed protein product [Vitis vinifera] Length = 458 Score = 70.1 bits (170), Expect(2) = 8e-12 Identities = 33/58 (56%), Positives = 43/58 (74%) Frame = +2 Query: 107 IANVKDLSGRGALHLAAHKGKLNVCKYLLEELKLDVNERDMEGGTALCYASDHGHLST 280 +A+VKD + RGALH AA +G+ VCKYLLEELKLDV+ +D +G T L +A+ GH T Sbjct: 47 VADVKDANKRGALHFAAREGRTEVCKYLLEELKLDVDAKDEDGETPLLHAARQGHTVT 104 Score = 24.6 bits (52), Expect(2) = 8e-12 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +3 Query: 6 RSKVDQTT*SCFS*NLRRIKKLGKELDNGK 95 R+KV Q + + NL KKL +LD+GK Sbjct: 12 RNKVQQFLNAACTGNLDLFKKLAAQLDDGK 41 >dbj|BAC23047.1| ankyrin-like protein [Solanum tuberosum] Length = 467 Score = 68.9 bits (167), Expect(2) = 2e-11 Identities = 33/59 (55%), Positives = 45/59 (76%) Frame = +2 Query: 107 IANVKDLSGRGALHLAAHKGKLNVCKYLLEELKLDVNERDMEGGTALCYASDHGHLSTV 283 +A+VKD + RGAL AA + K+ +CKYL+EELK+DVNE+D EG T L +A+ GH +TV Sbjct: 47 VADVKDGNKRGALIFAARESKIELCKYLVEELKVDVNEKDDEGETPLLHAAREGHTATV 105 Score = 24.6 bits (52), Expect(2) = 2e-11 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +3 Query: 6 RSKVDQTT*SCFS*NLRRIKKLGKELDNGK 95 R KV++ + S ++ KKL K+LD+GK Sbjct: 12 REKVNKFLKAACSGDIELFKKLAKQLDDGK 41 >ref|XP_002531277.1| ankyrin repeat-containing protein, putative [Ricinus communis] gi|223529110|gb|EEF31090.1| ankyrin repeat-containing protein, putative [Ricinus communis] Length = 463 Score = 72.4 bits (176), Expect(2) = 3e-11 Identities = 33/62 (53%), Positives = 46/62 (74%) Frame = +2 Query: 95 MNRAIANVKDLSGRGALHLAAHKGKLNVCKYLLEELKLDVNERDMEGGTALCYASDHGHL 274 M + +A++KD + RGALH AA +GK VCKYLLE+LKLDV+ +D +G T L +A+ GH Sbjct: 43 MAKTVADIKDANKRGALHFAAREGKTEVCKYLLEDLKLDVDTKDDDGETPLIHAARQGHT 102 Query: 275 ST 280 +T Sbjct: 103 AT 104 Score = 20.4 bits (41), Expect(2) = 3e-11 Identities = 10/30 (33%), Positives = 16/30 (53%) Frame = +3 Query: 6 RSKVDQTT*SCFS*NLRRIKKLGKELDNGK 95 R KV + + NL +K + +LD+GK Sbjct: 12 RQKVQNFLTAACTGNLDLLKNIAAQLDDGK 41 >ref|XP_002319644.1| predicted protein [Populus trichocarpa] gi|222858020|gb|EEE95567.1| predicted protein [Populus trichocarpa] Length = 451 Score = 71.2 bits (173), Expect = 8e-11 Identities = 31/62 (50%), Positives = 46/62 (74%) Frame = +2 Query: 95 MNRAIANVKDLSGRGALHLAAHKGKLNVCKYLLEELKLDVNERDMEGGTALCYASDHGHL 274 M+ +A++KD + RGALH AA +G+ VCKYL+EELKLDV+ +D +G T + +A+ GH Sbjct: 35 MSNTVADIKDANKRGALHFAAREGQTEVCKYLIEELKLDVDTKDEDGETPIIHAARQGHT 94 Query: 275 ST 280 +T Sbjct: 95 AT 96 >gb|ACN40446.1| unknown [Picea sitchensis] Length = 460 Score = 70.1 bits (170), Expect = 2e-10 Identities = 36/68 (52%), Positives = 46/68 (67%) Frame = +2 Query: 77 GVGQWEMNRAIANVKDLSGRGALHLAAHKGKLNVCKYLLEELKLDVNERDMEGGTALCYA 256 G GQ ++ IA VKD +GRGALH AA G+ +CKYLLE+L L V+ RD +G T L +A Sbjct: 43 GDGQ-DLAETIAAVKDANGRGALHFAARDGRTEICKYLLEDLNLCVDSRDDDGETPLIHA 101 Query: 257 SDHGHLST 280 + GHL T Sbjct: 102 TRQGHLQT 109