BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019465
         (1478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28799.3| unnamed protein product [Vitis vinifera]              493   e-137
emb|CAN79186.1| hypothetical protein VITISV_035853 [Vitis vinifera]   463   e-128
ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communi...   459   e-127
ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago t...   456   e-126
tpg|DAA62900.1| TPA: hypothetical protein ZEAMMB73_296177 [Zea m...   429   e-118

>emb|CBI28799.3| unnamed protein product [Vitis vinifera]
          Length = 935

 Score =  493 bits (1268), Expect = e-137
 Identities = 244/425 (57%), Positives = 299/425 (70%), Gaps = 1/425 (0%)
 Frame = -1

Query: 1478 NCRIYASDGRLLCYCDRRKLDWYLSRDLAKLVENDPPGIMLLFEPKGRPEDEDNDFYIQS 1299
            NCRI+ASDGRLLCYCDRRKL+WY+ R LAKLV+++P  IMLLFEPKGRPEDEDNDFY+QS
Sbjct: 513  NCRIFASDGRLLCYCDRRKLEWYVRRGLAKLVDDNPLAIMLLFEPKGRPEDEDNDFYVQS 572

Query: 1298 KKNICVGCGERNHYLRYRIVPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSVAEKHKR 1119
            KKNICVGCGERNHYLRYRI+PSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHS AEK+K+
Sbjct: 573  KKNICVGCGERNHYLRYRIIPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSAAEKYKK 632

Query: 1118 QIAAEFGIPLFVKKVTESSQTDIIDXXXXXXXXXXXXXXSPXXXXXXXXXXXRHGPNMPA 939
            +IAAEFGIPLFV+KV +S +  +                SP           RHGP MP+
Sbjct: 633  KIAAEFGIPLFVQKVVDSREAQVASQLSTSEVNTVEAGVSPLQLRTAAMALLRHGPRMPS 692

Query: 938  KRREELTLTVMKYFGGRKISTDDLKSALLVGMSPHQRRKHEKKRGLPFKHSTRGHLSNEA 759
            KR EEL  TVMKY+GGR+I+ +DL+ ALLVGMSPH+R++ E+K+G+  KHS      N+ 
Sbjct: 693  KRCEELRQTVMKYYGGREITEEDLEKALLVGMSPHERKRLERKKGMSLKHSKGAGFPNKE 752

Query: 758  NYNNADSIRPYTLTEAIKWDYKNGLETATEANLGVDMDASTRDIHKGCDSKVKGDAATTD 579
              +NA S+    +  A+K D + GL T      G            G D ++  +   +D
Sbjct: 753  QESNARSMGTSPIDNALKVDGEGGLNTTKGEACGKQ--------ENGNDLEITMEVLASD 804

Query: 578  GEDLNFNIASLLN-KGKATDTGEDLEDKSLSDFTYNSSQCKPSGTVSSTYNQKMSLLGHG 402
              +L+ + +     K       ++ E +S S+ T +    K +G  S  +N K+SLLGHG
Sbjct: 805  SNNLSSDRSETSEMKDMCVMDTDNCESRSQSEGTLDLFYPKSNGNASPKHNPKLSLLGHG 864

Query: 401  PHGKQVVDHLLKKYGEDGIRLFCQRWRQVFVEALHPRFLPSGWDVNHRGRRDFGEYSVYN 222
            PHGK+VVDHLLK+YGEDGIR FCQRWRQ FVEA+HPRFLP+GWDV H GRRDFGE+SVYN
Sbjct: 865  PHGKEVVDHLLKEYGEDGIRQFCQRWRQTFVEAIHPRFLPAGWDVMHSGRRDFGEFSVYN 924

Query: 221  PIKKS 207
            P KK+
Sbjct: 925  PDKKA 929


>emb|CAN79186.1| hypothetical protein VITISV_035853 [Vitis vinifera]
          Length = 951

 Score =  463 bits (1191), Expect = e-128
 Identities = 230/408 (56%), Positives = 283/408 (69%), Gaps = 1/408 (0%)
 Frame = -1

Query: 1478 NCRIYASDGRLLCYCDRRKLDWYLSRDLAKLVENDPPGIMLLFEPKGRPEDEDNDFYIQS 1299
            NCRI+ASDG+LLCYCDRRKL+WY+ R LAKLV+++P  IMLLFEPKGRPEDEDNDFY+QS
Sbjct: 484  NCRIFASDGQLLCYCDRRKLEWYVRRGLAKLVDDNPLAIMLLFEPKGRPEDEDNDFYVQS 543

Query: 1298 KKNICVGCGERNHYLRYRIVPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSVAEKHKR 1119
            KKNICVGCGERNHYLRYRI+PSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHS AEK+K+
Sbjct: 544  KKNICVGCGERNHYLRYRIIPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSAAEKYKK 603

Query: 1118 QIAAEFGIPLFVKKVTESSQTDIIDXXXXXXXXXXXXXXSPXXXXXXXXXXXRHGPNMPA 939
            +IAAEFGIPLFV+KV +S +  +                SP           RHGP MP+
Sbjct: 604  KIAAEFGIPLFVQKVVDSREAQVASQLSTSEVNTVEAGVSPLQLRTAAMALLRHGPRMPS 663

Query: 938  KRREELTLTVMKYFGGRKISTDDLKSALLVGMSPHQRRKHEKKRGLPFKHSTRGHLSNEA 759
            KR EEL  TVMKY+GGR+I+ +DL+ ALLVGMSPH+R++ E+K+G+  KHS      N+ 
Sbjct: 664  KRCEELRQTVMKYYGGREITEEDLEKALLVGMSPHERKRLERKKGMSLKHSKGAGFPNKE 723

Query: 758  NYNNADSIRPYTLTEAIKWDYKNGLETATEANLGVDMDASTRDIHKGCDSKVKGDAATTD 579
              +NA S+    +  A+K D + GL T      G            G D ++  +   +D
Sbjct: 724  QESNARSMGTSPIDNALKVDGEGGLNTTKGEACGKQ--------ENGNDLEITMEVLASD 775

Query: 578  GEDLNFNIASLLN-KGKATDTGEDLEDKSLSDFTYNSSQCKPSGTVSSTYNQKMSLLGHG 402
              +L+ + +     K       ++ E +S S+ T +    K  G  S  +N K+SLLGHG
Sbjct: 776  SNNLSSDRSETSEMKDMCVMDTDNCESRSQSEGTLDLFYPKSBGNASPKHNPKLSLLGHG 835

Query: 401  PHGKQVVDHLLKKYGEDGIRLFCQRWRQVFVEALHPRFLPSGWDVNHR 258
            PHGK+VVDHLLK+YGEDGIR FCQRWRQ FVEA+HPRFLP+GWDV HR
Sbjct: 836  PHGKEVVDHLLKEYGEDGIRQFCQRWRQTFVEAIHPRFLPAGWDVMHR 883


>ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communis]
            gi|223536557|gb|EEF38203.1| 3'-5' exonuclease, putative
            [Ricinus communis]
          Length = 977

 Score =  459 bits (1182), Expect = e-127
 Identities = 245/463 (52%), Positives = 297/463 (64%), Gaps = 38/463 (8%)
 Frame = -1

Query: 1478 NCRIYASDGRLLCYCDRRKLDWYLSRDLAKLVENDPPGIMLLFEPKGRPEDEDNDFYIQS 1299
            NCRIYA+DGRLLCYCDRRKL+WYL R+LA LV+ +PP I LLFEPKGRPEDEDNDFYIQS
Sbjct: 522  NCRIYANDGRLLCYCDRRKLEWYLHRELAILVDENPPAIRLLFEPKGRPEDEDNDFYIQS 581

Query: 1298 KKNICVGCGERNHYLRYRIVPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSVAEKHKR 1119
            K+NICVGCGE +HYLRYRI+PSCYR+HFPEHLKSHRSHDIVLLCVDCHEVAH+ AEK+KR
Sbjct: 582  KRNICVGCGEGSHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKYKR 641

Query: 1118 QIAAEFGIPLFVKKVTESSQTDIIDXXXXXXXXXXXXXXSPXXXXXXXXXXXRHGPNMPA 939
             +A EFGIPLFV+KV +S ++ II               SP           RHGP MP 
Sbjct: 642  HVAVEFGIPLFVRKVVDSKESAIISESSSSLMTAEEAGVSPLQLRTAAMALLRHGPRMPP 701

Query: 938  KRREELTLTVMKYFGGRKISTDDLKSALLVGMSPHQRRKHEKKRGLPFKHSTRGHLSNEA 759
            KRREELT  V +Y+GGR+IS +DL+ ALLVGMSPH+RR+ EKKRGL  K S     SN  
Sbjct: 702  KRREELTQIVTQYYGGREISQEDLERALLVGMSPHERRRFEKKRGLSLKRSANNICSNNE 761

Query: 758  NYNNA----DSIRPYTLTEAIKWDYKNGLETATEANLGVDMDASTRDIHKGCDSKVK-GD 594
              ++      S+   ++T+          E  TE     D    T D   G  S ++  D
Sbjct: 762  LVHDVTMVKSSVENNSITDTPDSSQTINSELRTEVKEDQDF-FKTTDPDVGVSSNLQVAD 820

Query: 593  AATTDGEDLNFNIASLLNKGKATDTGEDLEDKSLSDFTYNSSQCKPSGTVSSTY------ 432
             +    +D+N N  + ++ GK    G D +   ++          P+G V S Y      
Sbjct: 821  VSAAAHKDMNSN-ENEVSDGKEICAGNDGDTCEIN---------PPNGIVCSNYPTHGGH 870

Query: 431  -----NQKMSLLGHGPHGKQVVDHLLKKYGEDGIRLFCQRWRQVFVEALHPRFLPSGWDV 267
                 N K+SLLGHGPHGKQVV+HLLK+YG+DGIR FCQRWRQVFVEA+HPRFLP+GWDV
Sbjct: 871  GLSKNNSKLSLLGHGPHGKQVVEHLLKEYGDDGIREFCQRWRQVFVEAVHPRFLPAGWDV 930

Query: 266  NHR----------------------GRRDFGEYSVYNPIKKST 204
             HR                      GRR+FGE+SVYNP K+++
Sbjct: 931  MHRQCPEHNTQSTILDLIVSAVFASGRREFGEFSVYNPTKRAS 973


>ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
            gi|355506989|gb|AES88131.1| Exosome complex exonuclease
            RRP6 [Medicago truncatula]
          Length = 974

 Score =  456 bits (1172), Expect = e-126
 Identities = 237/436 (54%), Positives = 287/436 (65%), Gaps = 11/436 (2%)
 Frame = -1

Query: 1478 NCRIYASDGRLLCYCDRRKLDWYLSRDLAKLVENDPPGIMLLFEPKGRPEDEDNDFYIQS 1299
            NCRI+A+DGRLLCYCDR+KL+WYLSRDLAK+V+ +PP IMLLFEPKGRPEDE NDFYIQS
Sbjct: 553  NCRIFANDGRLLCYCDRKKLEWYLSRDLAKVVDEEPPAIMLLFEPKGRPEDEGNDFYIQS 612

Query: 1298 KKNICVGCGERNHYLRYRIVPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSVAEKHKR 1119
            KKNICVGCGE NHYLRYRI+PSCYR+HFPEHLKSHRSHDIVLLCVDCHE AH+ AEK+KR
Sbjct: 613  KKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEAAHAAAEKYKR 672

Query: 1118 QIAAEFGIPLFVKKVTESSQTDIIDXXXXXXXXXXXXXXSPXXXXXXXXXXXRHGPNMPA 939
            ++A+EFGIPL+V++V    Q                   SP           RHGP MP 
Sbjct: 673  KVASEFGIPLYVRRVIHPGQ--------ETEKPNDEGGVSPLQLRSAAVALLRHGPRMPH 724

Query: 938  KRREELTLTVMKYFGGRKISTDDLKSALLVGMSPHQRRKHEKKRGLPFKHSTRGHLSNEA 759
             RREELT  +  Y+GGR+IS +DL+ AL VGM+PH+RRK EKKRG+  KHST    +   
Sbjct: 725  DRREELTEIIKTYYGGREISKEDLEKALQVGMTPHERRKFEKKRGVSSKHSTGSASAVPY 784

Query: 758  NYNNADSIRPYTLTEAIKWDYKNGLETATEANLGVDMDASTRDIHKGCDSKVKGDAATTD 579
              N+ D     +  + +K D  +G     E   G +    +       D  V  D AT++
Sbjct: 785  EGNDTDYAPGMSNGDTLKVDTLDGSYVNEETRSGDNRQDDSGKPSLASDLAV--DKATSN 842

Query: 578  GEDLNFNIASLLNKGKATDTGEDLEDKSLSDFTYNSSQCKPS-----------GTVSSTY 432
            G  +           K TD  +D    SL D   + ++ +P+            T  + +
Sbjct: 843  GNTIVV---------KTTDHDDDETSYSLVDTDESLNKMQPNVVSDEESIKDEDTTQAKH 893

Query: 431  NQKMSLLGHGPHGKQVVDHLLKKYGEDGIRLFCQRWRQVFVEALHPRFLPSGWDVNHRGR 252
            + K+SLLGHGPHGKQVVDHLLK+YGEDGIR FCQRWRQVFV+AL PRFLP GWDV H GR
Sbjct: 894  HSKLSLLGHGPHGKQVVDHLLKEYGEDGIREFCQRWRQVFVDALKPRFLPGGWDVKHSGR 953

Query: 251  RDFGEYSVYNPIKKST 204
            RDFGE+SVYN  K+ T
Sbjct: 954  RDFGEFSVYNHQKRET 969


>tpg|DAA62900.1| TPA: hypothetical protein ZEAMMB73_296177 [Zea mays]
          Length = 960

 Score =  429 bits (1104), Expect = e-118
 Identities = 224/437 (51%), Positives = 278/437 (63%), Gaps = 8/437 (1%)
 Frame = -1

Query: 1478 NCRIYASDGRLLCYCDRRKLDWYLSRDLAKLVENDPPGIMLLFEPKGRPEDEDNDFYIQS 1299
            NCRIYASDGRLLCYCDR+KL+WY+ R+LAKL+EN PP IMLLFEPKGRPEDEDN+FYIQS
Sbjct: 530  NCRIYASDGRLLCYCDRKKLEWYIQRNLAKLIENSPPAIMLLFEPKGRPEDEDNEFYIQS 589

Query: 1298 KKNICVGCGERNHYLRYRIVPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSVAEKHKR 1119
            KKNICVGCGE++HY+RYRI+PSCYRMHFPEHLKSHRSHDIVLLCVDCHE+AHS AEK+KR
Sbjct: 590  KKNICVGCGEKSHYIRYRIIPSCYRMHFPEHLKSHRSHDIVLLCVDCHEIAHSAAEKYKR 649

Query: 1118 QIAAEFGIPLFVKKVTESSQTDIIDXXXXXXXXXXXXXXSPXXXXXXXXXXXRHGPNMPA 939
            +IA EFGIPLFV+K+  S    +I               SP           RHG  MP 
Sbjct: 650  RIAEEFGIPLFVQKIMNSGDISLITNTSVSEDKLNGTGVSPLQLRTAAMALLRHGSTMPL 709

Query: 938  KRREELTLTVMKYFGGRKISTDDLKSALLVGMSPHQRRKHEKKRGLPFKHSTRGHL-SNE 762
            KR EEL   V  Y+GGR ++ +DL+ ALLVGMSPH+RR+ EKK+G  F+   +  +  + 
Sbjct: 710  KRCEELMQIVKSYYGGRDVTPEDLEMALLVGMSPHERRRLEKKKGYSFRAQAQTIIRKSS 769

Query: 761  ANYNNADSIRPYTLTEAIKWDY------KNGLETATEANLGVDMDASTRDIHKGCDS-KV 603
            +N  + DS        A+   +       NG +   E   G         + +G  S  V
Sbjct: 770  SNTISEDSGHGSENCHALSARFPEVGTGSNGQQEFDET--GNQNQLENLTLSQGSSSLPV 827

Query: 602  KGDAATTDGEDLNFNIASLLNKGKATDTGEDLEDKSLSDFTYNSSQCKPSGTVSSTYNQK 423
              +  T+D + +     +      A   G   +DK         S C  S  V S   +K
Sbjct: 828  SMEDTTSDHDTVTLETDTEQQARGACTPGNSHDDK-------EQSICDNSSQVISKNAEK 880

Query: 422  MSLLGHGPHGKQVVDHLLKKYGEDGIRLFCQRWRQVFVEALHPRFLPSGWDVNHRGRRDF 243
            +SLLGHG HGKQVV+ L    GE+ +  FCQRWRQ+FVEA+HPR+LPSGW++NH GRRDF
Sbjct: 881  ISLLGHGHHGKQVVELLFSNGGEEFVNQFCQRWRQIFVEAVHPRYLPSGWNINHSGRRDF 940

Query: 242  GEYSVYNPIKKSTIKAT 192
            G++SVY P +K    AT
Sbjct: 941  GDFSVYKPPRKDPQSAT 957