BLASTX nr result
ID: Coptis24_contig00019465
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019465 (1478 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI28799.3| unnamed protein product [Vitis vinifera] 493 e-137 emb|CAN79186.1| hypothetical protein VITISV_035853 [Vitis vinifera] 463 e-128 ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communi... 459 e-127 ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago t... 456 e-126 tpg|DAA62900.1| TPA: hypothetical protein ZEAMMB73_296177 [Zea m... 429 e-118 >emb|CBI28799.3| unnamed protein product [Vitis vinifera] Length = 935 Score = 493 bits (1268), Expect = e-137 Identities = 244/425 (57%), Positives = 299/425 (70%), Gaps = 1/425 (0%) Frame = -1 Query: 1478 NCRIYASDGRLLCYCDRRKLDWYLSRDLAKLVENDPPGIMLLFEPKGRPEDEDNDFYIQS 1299 NCRI+ASDGRLLCYCDRRKL+WY+ R LAKLV+++P IMLLFEPKGRPEDEDNDFY+QS Sbjct: 513 NCRIFASDGRLLCYCDRRKLEWYVRRGLAKLVDDNPLAIMLLFEPKGRPEDEDNDFYVQS 572 Query: 1298 KKNICVGCGERNHYLRYRIVPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSVAEKHKR 1119 KKNICVGCGERNHYLRYRI+PSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHS AEK+K+ Sbjct: 573 KKNICVGCGERNHYLRYRIIPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSAAEKYKK 632 Query: 1118 QIAAEFGIPLFVKKVTESSQTDIIDXXXXXXXXXXXXXXSPXXXXXXXXXXXRHGPNMPA 939 +IAAEFGIPLFV+KV +S + + SP RHGP MP+ Sbjct: 633 KIAAEFGIPLFVQKVVDSREAQVASQLSTSEVNTVEAGVSPLQLRTAAMALLRHGPRMPS 692 Query: 938 KRREELTLTVMKYFGGRKISTDDLKSALLVGMSPHQRRKHEKKRGLPFKHSTRGHLSNEA 759 KR EEL TVMKY+GGR+I+ +DL+ ALLVGMSPH+R++ E+K+G+ KHS N+ Sbjct: 693 KRCEELRQTVMKYYGGREITEEDLEKALLVGMSPHERKRLERKKGMSLKHSKGAGFPNKE 752 Query: 758 NYNNADSIRPYTLTEAIKWDYKNGLETATEANLGVDMDASTRDIHKGCDSKVKGDAATTD 579 +NA S+ + A+K D + GL T G G D ++ + +D Sbjct: 753 QESNARSMGTSPIDNALKVDGEGGLNTTKGEACGKQ--------ENGNDLEITMEVLASD 804 Query: 578 GEDLNFNIASLLN-KGKATDTGEDLEDKSLSDFTYNSSQCKPSGTVSSTYNQKMSLLGHG 402 +L+ + + K ++ E +S S+ T + K +G S +N K+SLLGHG Sbjct: 805 SNNLSSDRSETSEMKDMCVMDTDNCESRSQSEGTLDLFYPKSNGNASPKHNPKLSLLGHG 864 Query: 401 PHGKQVVDHLLKKYGEDGIRLFCQRWRQVFVEALHPRFLPSGWDVNHRGRRDFGEYSVYN 222 PHGK+VVDHLLK+YGEDGIR FCQRWRQ FVEA+HPRFLP+GWDV H GRRDFGE+SVYN Sbjct: 865 PHGKEVVDHLLKEYGEDGIRQFCQRWRQTFVEAIHPRFLPAGWDVMHSGRRDFGEFSVYN 924 Query: 221 PIKKS 207 P KK+ Sbjct: 925 PDKKA 929 >emb|CAN79186.1| hypothetical protein VITISV_035853 [Vitis vinifera] Length = 951 Score = 463 bits (1191), Expect = e-128 Identities = 230/408 (56%), Positives = 283/408 (69%), Gaps = 1/408 (0%) Frame = -1 Query: 1478 NCRIYASDGRLLCYCDRRKLDWYLSRDLAKLVENDPPGIMLLFEPKGRPEDEDNDFYIQS 1299 NCRI+ASDG+LLCYCDRRKL+WY+ R LAKLV+++P IMLLFEPKGRPEDEDNDFY+QS Sbjct: 484 NCRIFASDGQLLCYCDRRKLEWYVRRGLAKLVDDNPLAIMLLFEPKGRPEDEDNDFYVQS 543 Query: 1298 KKNICVGCGERNHYLRYRIVPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSVAEKHKR 1119 KKNICVGCGERNHYLRYRI+PSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHS AEK+K+ Sbjct: 544 KKNICVGCGERNHYLRYRIIPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSAAEKYKK 603 Query: 1118 QIAAEFGIPLFVKKVTESSQTDIIDXXXXXXXXXXXXXXSPXXXXXXXXXXXRHGPNMPA 939 +IAAEFGIPLFV+KV +S + + SP RHGP MP+ Sbjct: 604 KIAAEFGIPLFVQKVVDSREAQVASQLSTSEVNTVEAGVSPLQLRTAAMALLRHGPRMPS 663 Query: 938 KRREELTLTVMKYFGGRKISTDDLKSALLVGMSPHQRRKHEKKRGLPFKHSTRGHLSNEA 759 KR EEL TVMKY+GGR+I+ +DL+ ALLVGMSPH+R++ E+K+G+ KHS N+ Sbjct: 664 KRCEELRQTVMKYYGGREITEEDLEKALLVGMSPHERKRLERKKGMSLKHSKGAGFPNKE 723 Query: 758 NYNNADSIRPYTLTEAIKWDYKNGLETATEANLGVDMDASTRDIHKGCDSKVKGDAATTD 579 +NA S+ + A+K D + GL T G G D ++ + +D Sbjct: 724 QESNARSMGTSPIDNALKVDGEGGLNTTKGEACGKQ--------ENGNDLEITMEVLASD 775 Query: 578 GEDLNFNIASLLN-KGKATDTGEDLEDKSLSDFTYNSSQCKPSGTVSSTYNQKMSLLGHG 402 +L+ + + K ++ E +S S+ T + K G S +N K+SLLGHG Sbjct: 776 SNNLSSDRSETSEMKDMCVMDTDNCESRSQSEGTLDLFYPKSBGNASPKHNPKLSLLGHG 835 Query: 401 PHGKQVVDHLLKKYGEDGIRLFCQRWRQVFVEALHPRFLPSGWDVNHR 258 PHGK+VVDHLLK+YGEDGIR FCQRWRQ FVEA+HPRFLP+GWDV HR Sbjct: 836 PHGKEVVDHLLKEYGEDGIRQFCQRWRQTFVEAIHPRFLPAGWDVMHR 883 >ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communis] gi|223536557|gb|EEF38203.1| 3'-5' exonuclease, putative [Ricinus communis] Length = 977 Score = 459 bits (1182), Expect = e-127 Identities = 245/463 (52%), Positives = 297/463 (64%), Gaps = 38/463 (8%) Frame = -1 Query: 1478 NCRIYASDGRLLCYCDRRKLDWYLSRDLAKLVENDPPGIMLLFEPKGRPEDEDNDFYIQS 1299 NCRIYA+DGRLLCYCDRRKL+WYL R+LA LV+ +PP I LLFEPKGRPEDEDNDFYIQS Sbjct: 522 NCRIYANDGRLLCYCDRRKLEWYLHRELAILVDENPPAIRLLFEPKGRPEDEDNDFYIQS 581 Query: 1298 KKNICVGCGERNHYLRYRIVPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSVAEKHKR 1119 K+NICVGCGE +HYLRYRI+PSCYR+HFPEHLKSHRSHDIVLLCVDCHEVAH+ AEK+KR Sbjct: 582 KRNICVGCGEGSHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKYKR 641 Query: 1118 QIAAEFGIPLFVKKVTESSQTDIIDXXXXXXXXXXXXXXSPXXXXXXXXXXXRHGPNMPA 939 +A EFGIPLFV+KV +S ++ II SP RHGP MP Sbjct: 642 HVAVEFGIPLFVRKVVDSKESAIISESSSSLMTAEEAGVSPLQLRTAAMALLRHGPRMPP 701 Query: 938 KRREELTLTVMKYFGGRKISTDDLKSALLVGMSPHQRRKHEKKRGLPFKHSTRGHLSNEA 759 KRREELT V +Y+GGR+IS +DL+ ALLVGMSPH+RR+ EKKRGL K S SN Sbjct: 702 KRREELTQIVTQYYGGREISQEDLERALLVGMSPHERRRFEKKRGLSLKRSANNICSNNE 761 Query: 758 NYNNA----DSIRPYTLTEAIKWDYKNGLETATEANLGVDMDASTRDIHKGCDSKVK-GD 594 ++ S+ ++T+ E TE D T D G S ++ D Sbjct: 762 LVHDVTMVKSSVENNSITDTPDSSQTINSELRTEVKEDQDF-FKTTDPDVGVSSNLQVAD 820 Query: 593 AATTDGEDLNFNIASLLNKGKATDTGEDLEDKSLSDFTYNSSQCKPSGTVSSTY------ 432 + +D+N N + ++ GK G D + ++ P+G V S Y Sbjct: 821 VSAAAHKDMNSN-ENEVSDGKEICAGNDGDTCEIN---------PPNGIVCSNYPTHGGH 870 Query: 431 -----NQKMSLLGHGPHGKQVVDHLLKKYGEDGIRLFCQRWRQVFVEALHPRFLPSGWDV 267 N K+SLLGHGPHGKQVV+HLLK+YG+DGIR FCQRWRQVFVEA+HPRFLP+GWDV Sbjct: 871 GLSKNNSKLSLLGHGPHGKQVVEHLLKEYGDDGIREFCQRWRQVFVEAVHPRFLPAGWDV 930 Query: 266 NHR----------------------GRRDFGEYSVYNPIKKST 204 HR GRR+FGE+SVYNP K+++ Sbjct: 931 MHRQCPEHNTQSTILDLIVSAVFASGRREFGEFSVYNPTKRAS 973 >ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago truncatula] gi|355506989|gb|AES88131.1| Exosome complex exonuclease RRP6 [Medicago truncatula] Length = 974 Score = 456 bits (1172), Expect = e-126 Identities = 237/436 (54%), Positives = 287/436 (65%), Gaps = 11/436 (2%) Frame = -1 Query: 1478 NCRIYASDGRLLCYCDRRKLDWYLSRDLAKLVENDPPGIMLLFEPKGRPEDEDNDFYIQS 1299 NCRI+A+DGRLLCYCDR+KL+WYLSRDLAK+V+ +PP IMLLFEPKGRPEDE NDFYIQS Sbjct: 553 NCRIFANDGRLLCYCDRKKLEWYLSRDLAKVVDEEPPAIMLLFEPKGRPEDEGNDFYIQS 612 Query: 1298 KKNICVGCGERNHYLRYRIVPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSVAEKHKR 1119 KKNICVGCGE NHYLRYRI+PSCYR+HFPEHLKSHRSHDIVLLCVDCHE AH+ AEK+KR Sbjct: 613 KKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEAAHAAAEKYKR 672 Query: 1118 QIAAEFGIPLFVKKVTESSQTDIIDXXXXXXXXXXXXXXSPXXXXXXXXXXXRHGPNMPA 939 ++A+EFGIPL+V++V Q SP RHGP MP Sbjct: 673 KVASEFGIPLYVRRVIHPGQ--------ETEKPNDEGGVSPLQLRSAAVALLRHGPRMPH 724 Query: 938 KRREELTLTVMKYFGGRKISTDDLKSALLVGMSPHQRRKHEKKRGLPFKHSTRGHLSNEA 759 RREELT + Y+GGR+IS +DL+ AL VGM+PH+RRK EKKRG+ KHST + Sbjct: 725 DRREELTEIIKTYYGGREISKEDLEKALQVGMTPHERRKFEKKRGVSSKHSTGSASAVPY 784 Query: 758 NYNNADSIRPYTLTEAIKWDYKNGLETATEANLGVDMDASTRDIHKGCDSKVKGDAATTD 579 N+ D + + +K D +G E G + + D V D AT++ Sbjct: 785 EGNDTDYAPGMSNGDTLKVDTLDGSYVNEETRSGDNRQDDSGKPSLASDLAV--DKATSN 842 Query: 578 GEDLNFNIASLLNKGKATDTGEDLEDKSLSDFTYNSSQCKPS-----------GTVSSTY 432 G + K TD +D SL D + ++ +P+ T + + Sbjct: 843 GNTIVV---------KTTDHDDDETSYSLVDTDESLNKMQPNVVSDEESIKDEDTTQAKH 893 Query: 431 NQKMSLLGHGPHGKQVVDHLLKKYGEDGIRLFCQRWRQVFVEALHPRFLPSGWDVNHRGR 252 + K+SLLGHGPHGKQVVDHLLK+YGEDGIR FCQRWRQVFV+AL PRFLP GWDV H GR Sbjct: 894 HSKLSLLGHGPHGKQVVDHLLKEYGEDGIREFCQRWRQVFVDALKPRFLPGGWDVKHSGR 953 Query: 251 RDFGEYSVYNPIKKST 204 RDFGE+SVYN K+ T Sbjct: 954 RDFGEFSVYNHQKRET 969 >tpg|DAA62900.1| TPA: hypothetical protein ZEAMMB73_296177 [Zea mays] Length = 960 Score = 429 bits (1104), Expect = e-118 Identities = 224/437 (51%), Positives = 278/437 (63%), Gaps = 8/437 (1%) Frame = -1 Query: 1478 NCRIYASDGRLLCYCDRRKLDWYLSRDLAKLVENDPPGIMLLFEPKGRPEDEDNDFYIQS 1299 NCRIYASDGRLLCYCDR+KL+WY+ R+LAKL+EN PP IMLLFEPKGRPEDEDN+FYIQS Sbjct: 530 NCRIYASDGRLLCYCDRKKLEWYIQRNLAKLIENSPPAIMLLFEPKGRPEDEDNEFYIQS 589 Query: 1298 KKNICVGCGERNHYLRYRIVPSCYRMHFPEHLKSHRSHDIVLLCVDCHEVAHSVAEKHKR 1119 KKNICVGCGE++HY+RYRI+PSCYRMHFPEHLKSHRSHDIVLLCVDCHE+AHS AEK+KR Sbjct: 590 KKNICVGCGEKSHYIRYRIIPSCYRMHFPEHLKSHRSHDIVLLCVDCHEIAHSAAEKYKR 649 Query: 1118 QIAAEFGIPLFVKKVTESSQTDIIDXXXXXXXXXXXXXXSPXXXXXXXXXXXRHGPNMPA 939 +IA EFGIPLFV+K+ S +I SP RHG MP Sbjct: 650 RIAEEFGIPLFVQKIMNSGDISLITNTSVSEDKLNGTGVSPLQLRTAAMALLRHGSTMPL 709 Query: 938 KRREELTLTVMKYFGGRKISTDDLKSALLVGMSPHQRRKHEKKRGLPFKHSTRGHL-SNE 762 KR EEL V Y+GGR ++ +DL+ ALLVGMSPH+RR+ EKK+G F+ + + + Sbjct: 710 KRCEELMQIVKSYYGGRDVTPEDLEMALLVGMSPHERRRLEKKKGYSFRAQAQTIIRKSS 769 Query: 761 ANYNNADSIRPYTLTEAIKWDY------KNGLETATEANLGVDMDASTRDIHKGCDS-KV 603 +N + DS A+ + NG + E G + +G S V Sbjct: 770 SNTISEDSGHGSENCHALSARFPEVGTGSNGQQEFDET--GNQNQLENLTLSQGSSSLPV 827 Query: 602 KGDAATTDGEDLNFNIASLLNKGKATDTGEDLEDKSLSDFTYNSSQCKPSGTVSSTYNQK 423 + T+D + + + A G +DK S C S V S +K Sbjct: 828 SMEDTTSDHDTVTLETDTEQQARGACTPGNSHDDK-------EQSICDNSSQVISKNAEK 880 Query: 422 MSLLGHGPHGKQVVDHLLKKYGEDGIRLFCQRWRQVFVEALHPRFLPSGWDVNHRGRRDF 243 +SLLGHG HGKQVV+ L GE+ + FCQRWRQ+FVEA+HPR+LPSGW++NH GRRDF Sbjct: 881 ISLLGHGHHGKQVVELLFSNGGEEFVNQFCQRWRQIFVEAVHPRYLPSGWNINHSGRRDF 940 Query: 242 GEYSVYNPIKKSTIKAT 192 G++SVY P +K AT Sbjct: 941 GDFSVYKPPRKDPQSAT 957