BLASTX nr result

ID: Coptis24_contig00019456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019456
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABV89615.1| bet v I allergen family protein [Brassica rapa]         82   3e-14
ref|XP_002893317.1| bet v I allergen family protein [Arabidopsis...    81   1e-13
ref|NP_001053026.1| Os04g0465600 [Oryza sativa Japonica Group] g...    80   1e-13
gb|EAY94463.1| hypothetical protein OsI_16233 [Oryza sativa Indi...    80   1e-13
gb|AAM65899.1| pollen allergen-like protein [Arabidopsis thaliana]     80   2e-13

>gb|ABV89615.1| bet v I allergen family protein [Brassica rapa]
          Length = 155

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 37/80 (46%), Positives = 53/80 (66%)
 Frame = -1

Query: 448 EKIEFVDIPNKTIVCRLVDGEITSLYKNIKAKIQVVPKGSGSLVKWSAELEKLSNDVPDP 269
           E+IE VD+ NK++   ++ GE+   YK  K  I V PKG GS++KWSAE EK  +++ DP
Sbjct: 72  ERIETVDLENKSMTYSIIGGEMLEYYKTFKGTITVTPKGGGSILKWSAEFEKTGHEIEDP 131

Query: 268 IMIQDYAAKFISGLDAYLLK 209
            +I+D+A K    +D YLLK
Sbjct: 132 HVIKDFAVKNFKEIDEYLLK 151


>ref|XP_002893317.1| bet v I allergen family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297339159|gb|EFH69576.1| bet v I allergen family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 155

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/80 (46%), Positives = 53/80 (66%)
 Frame = -1

Query: 448 EKIEFVDIPNKTIVCRLVDGEITSLYKNIKAKIQVVPKGSGSLVKWSAELEKLSNDVPDP 269
           E+IE VD+ NK++   ++ GE+   YK  K  I V+PK  GSL+KWS E EK S+++ DP
Sbjct: 72  ERIEAVDLENKSMSYSIIGGEMLEYYKTFKGTITVIPKDGGSLLKWSGEFEKTSHEIDDP 131

Query: 268 IMIQDYAAKFISGLDAYLLK 209
            +I+D+A K    +D YLLK
Sbjct: 132 HVIKDFAVKNFKEIDEYLLK 151


>ref|NP_001053026.1| Os04g0465600 [Oryza sativa Japonica Group]
           gi|21741225|emb|CAD40936.1| OSJNBb0048E02.12 [Oryza
           sativa Japonica Group] gi|113564597|dbj|BAF14940.1|
           Os04g0465600 [Oryza sativa Japonica Group]
           gi|125590669|gb|EAZ31019.1| hypothetical protein
           OsJ_15102 [Oryza sativa Japonica Group]
           gi|215765229|dbj|BAG86926.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 157

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
 Frame = -1

Query: 460 TFVKEKIEFVDIPNKTIVCRLVDGEITSLYKNIKAKIQVVPKG-------SGSLVKWSAE 302
           TF KEK+E  D   K +   +VDGE+ S YKN +  +QV PKG        G++V W+ +
Sbjct: 66  TFAKEKVEVADDEKKVVSYSVVDGELVSFYKNFRVTLQVTPKGGAAAPAADGAVVSWTMD 125

Query: 301 LEKLSNDVPDPIMIQDYAAKFISGLDAYLLK 209
            +K S +VPDP +I++ AAK    LD YLLK
Sbjct: 126 FDKASEEVPDPDVIKETAAKTFHDLDDYLLK 156


>gb|EAY94463.1| hypothetical protein OsI_16233 [Oryza sativa Indica Group]
          Length = 157

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
 Frame = -1

Query: 460 TFVKEKIEFVDIPNKTIVCRLVDGEITSLYKNIKAKIQVVPKG-------SGSLVKWSAE 302
           TF KEK+E  D   K +   +VDGE+ S YKN +  +QV PKG        G++V W+ +
Sbjct: 66  TFAKEKVEVADDEKKVVSYSVVDGELVSFYKNFRVTLQVTPKGGAAAPAADGAVVSWTMD 125

Query: 301 LEKLSNDVPDPIMIQDYAAKFISGLDAYLLK 209
            +K S +VPDP +I++ AAK    LD YLLK
Sbjct: 126 FDKASEEVPDPDVIKETAAKTFHDLDDYLLK 156


>gb|AAM65899.1| pollen allergen-like protein [Arabidopsis thaliana]
          Length = 155

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/80 (45%), Positives = 53/80 (66%)
 Frame = -1

Query: 448 EKIEFVDIPNKTIVCRLVDGEITSLYKNIKAKIQVVPKGSGSLVKWSAELEKLSNDVPDP 269
           E+IE VD+ NK++   ++ GE+   YK  K  I V+PK  GSL+KWS E EK ++++ DP
Sbjct: 72  ERIEAVDLENKSMSYSIIGGEMLEYYKTFKGTITVIPKNGGSLLKWSGEFEKTAHEIDDP 131

Query: 268 IMIQDYAAKFISGLDAYLLK 209
            +I+D+A K    +D YLLK
Sbjct: 132 HVIKDFAVKNFKEIDEYLLK 151


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