BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019444
         (798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                104   3e-39
emb|CAN64816.1| hypothetical protein VITISV_010668 [Vitis vinifera]   100   4e-37
emb|CAN74243.1| hypothetical protein VITISV_037117 [Vitis vinifera]    97   4e-36
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]    93   1e-35
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...    90   2e-35

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  104 bits (260), Expect(2) = 3e-39
 Identities = 49/70 (70%), Positives = 56/70 (80%)
 Frame = +1

Query: 85   LDVSNAFLHGHLKETVYMVQTPGFVDPTTPNHVCKLQKSLYGLKQAPRA*YPELVQVLVD 264
            LDVSNAFLHGHLKE VYMVQ PGFVDP+ P+HVCKL+KSLYGLKQAPRA Y      ++ 
Sbjct: 1256 LDVSNAFLHGHLKEDVYMVQPPGFVDPSKPHHVCKLRKSLYGLKQAPRAWYEAFYTAILS 1315

Query: 265  LNFETSKADT 294
            L F +S +DT
Sbjct: 1316 LGFSSSHSDT 1325



 Score = 84.0 bits (206), Expect(2) = 3e-39
 Identities = 45/89 (50%), Positives = 65/89 (73%)
 Frame = +3

Query: 348  MIITENSSSLIQNVISQCSQKFPMKDLGDLHFFLGLEVHRSSKQLFLCQSKYALELLQKA 527
            +IIT +S +  Q++ISQ    FP+KDLGD+++FLG+EVH+S + L L Q+KYAL+LL+K 
Sbjct: 1345 IIITGSSVTECQSIISQLQTMFPVKDLGDINYFLGIEVHKSDQGLLLHQAKYALDLLKKT 1404

Query: 528  NMEGAKTISTPCPTGTELDSTSGELFEEP 614
            +M GAK  +TP  T ++LD  SG L  +P
Sbjct: 1405 DMLGAKPCATPVST-SKLDH-SGTLLSDP 1431


>emb|CAN64816.1| hypothetical protein VITISV_010668 [Vitis vinifera]
          Length = 1212

 Score =  100 bits (250), Expect(2) = 4e-37
 Identities = 51/89 (57%), Positives = 67/89 (75%)
 Frame = +3

Query: 348  MIITENSSSLIQNVISQCSQKFPMKDLGDLHFFLGLEVHRSSKQLFLCQSKYALELLQKA 527
            M+IT ++SS++Q +I+Q S++F MKDL DLH+FLG+EV  + K LFL Q+KYALELLQ A
Sbjct: 931  MVITXSNSSMVQTLITQLSKEFSMKDLSDLHYFLGVEVQANEKGLFLSQTKYALELLQHA 990

Query: 528  NMEGAKTISTPCPTGTELDSTSGELFEEP 614
            +M  AK ISTPC  G  L S  G+LF +P
Sbjct: 991  SMIDAKPISTPCVVGQHL-SIEGKLFSDP 1018



 Score = 80.5 bits (197), Expect(2) = 4e-37
 Identities = 37/70 (52%), Positives = 49/70 (70%)
 Frame = +1

Query: 85   LDVSNAFLHGHLKETVYMVQTPGFVDPTTPNHVCKLQKSLYGLKQAPRA*YPELVQVLVD 264
            LDV NAFLHG L E VYM Q PG+ +P  P HVC+L+++LYGLKQAPRA +      L+ 
Sbjct: 841  LDVKNAFLHGFLNEEVYMEQPPGYTNPQFPQHVCRLKRALYGLKQAPRAWFHRFSSFLLK 900

Query: 265  LNFETSKADT 294
            L F +++ D+
Sbjct: 901  LGFFSNQXDS 910


>emb|CAN74243.1| hypothetical protein VITISV_037117 [Vitis vinifera]
          Length = 809

 Score = 97.1 bits (240), Expect(2) = 4e-36
 Identities = 50/94 (53%), Positives = 67/94 (71%)
 Frame = +3

Query: 348 MIITENSSSLIQNVISQCSQKFPMKDLGDLHFFLGLEVHRSSKQLFLCQSKYALELLQKA 527
           M+IT ++SS++Q +I+  S++F MKDLGDLH+FLG EV  + K LFL Q+KYALELLQ+A
Sbjct: 541 MVITGSNSSMVQTLITXLSKEFSMKDLGDLHYFLGXEVQANEKGLFLSQTKYALELLQRA 600

Query: 528 NMEGAKTISTPCPTGTELDSTSGELFEEPVYSKF 629
           +   AK ISTPC     L ST  +LF +P  + F
Sbjct: 601 SXIDAKPISTPCVIDQHL-STEXKLFSDPTMTTF 633



 Score = 81.3 bits (199), Expect(2) = 4e-36
 Identities = 39/70 (55%), Positives = 49/70 (70%)
 Frame = +1

Query: 85  LDVSNAFLHGHLKETVYMVQTPGFVDPTTPNHVCKLQKSLYGLKQAPRA*YPELVQVLVD 264
           LDV NAFLHG L E VYM Q  G+ DP  P HVC+L+++LYGLKQAPRA +      L+ 
Sbjct: 451 LDVKNAFLHGFLNEEVYMEQPXGYXDPQFPXHVCRLKRALYGLKQAPRAWFHXFSSFLLK 510

Query: 265 LNFETSKADT 294
           L F +S+AD+
Sbjct: 511 LGFLSSQADS 520


>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score = 92.8 bits (229), Expect(2) = 1e-35
 Identities = 49/89 (55%), Positives = 63/89 (70%)
 Frame = +3

Query: 348  MIITENSSSLIQNVISQCSQKFPMKDLGDLHFFLGLEVHRSSKQLFLCQSKYALELLQKA 527
            MIIT ++ SL+   I++ S +F MKDLGDLH+FLG+EV  + K LFL Q+KYAL+LLQ+A
Sbjct: 1037 MIITGSTPSLVHTFITRLSNEFSMKDLGDLHYFLGVEVQANEKGLFLSQTKYALDLLQRA 1096

Query: 528  NMEGAKTISTPCPTGTELDSTSGELFEEP 614
            +M  AK ISTP   G  L S  G LF +P
Sbjct: 1097 SMIDAKPISTPFVVGQHL-SAEGTLFSDP 1124



 Score = 84.0 bits (206), Expect(2) = 1e-35
 Identities = 39/70 (55%), Positives = 49/70 (70%)
 Frame = +1

Query: 85   LDVSNAFLHGHLKETVYMVQTPGFVDPTTPNHVCKLQKSLYGLKQAPRA*YPELVQVLVD 264
            LDV NAFLHG L E VYM Q PG+ DP  P HVC+L+++LYGLKQAPRA +      L+ 
Sbjct: 947  LDVKNAFLHGFLNEEVYMEQPPGYTDPQFPQHVCRLKRALYGLKQAPRAWFHRFSSFLLK 1006

Query: 265  LNFETSKADT 294
              F +S+AD+
Sbjct: 1007 HGFHSSQADS 1016


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score = 90.1 bits (222), Expect(2) = 2e-35
 Identities = 49/87 (56%), Positives = 56/87 (64%)
 Frame = +1

Query: 85   LDVSNAFLHGHLKETVYMVQTPGFVDPTTPNHVCKLQKSLYGLKQAPRA*YPELVQVLVD 264
            LDV NAFLHG L+ETVYM Q PGF D T PN+ C LQKSLYGLKQ PRA Y  L + L  
Sbjct: 1032 LDVQNAFLHGILEETVYMKQPPGFADTTHPNYHCHLQKSLYGLKQRPRAWYSRLSEKLQS 1091

Query: 265  LNFETSKADTFDFNDNWLSHCHYTCLW 345
            L F  SKAD   F    + + H T ++
Sbjct: 1092 LGFVPSKADVSLF----IYNAHSTAIY 1114



 Score = 85.9 bits (211), Expect(2) = 2e-35
 Identities = 41/94 (43%), Positives = 59/94 (62%)
 Frame = +3

Query: 348  MIITENSSSLIQNVISQCSQKFPMKDLGDLHFFLGLEVHRSSKQLFLCQSKYALELLQKA 527
            +IIT +S   I NV+++    F +KDLGDLH+FLG+EVHR    L LCQ KYA +LL++ 
Sbjct: 1122 IIITGSSPHAIDNVLAKLKDDFAIKDLGDLHYFLGIEVHRKGDGLLLCQEKYARDLLKRV 1181

Query: 528  NMEGAKTISTPCPTGTELDSTSGELFEEPVYSKF 629
             ME  K + TP  T  +L +++G L      +K+
Sbjct: 1182 GMECCKPVHTPVATSEKLSASAGTLLSPEETTKY 1215