BLASTX nr result

ID: Coptis24_contig00019437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019437
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]   119   2e-25
ref|XP_002879612.1| hypothetical protein ARALYDRAFT_902761 [Arab...   114   6e-24
ref|NP_181184.1| uncharacterized protein [Arabidopsis thaliana] ...   114   8e-24
emb|CBI30411.3| unnamed protein product [Vitis vinifera]              113   1e-23
ref|XP_002303847.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23

>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/134 (44%), Positives = 84/134 (62%)
 Frame = -1

Query: 440 VLSIGPLHRGNPKLAAMEKHKWRYFHDLLSSNPKFCLEKCLVEMKSWEEMARSFYS*TIE 261
           +LSIGP+H G  +L  ME HKW+Y   LL   P   +E+ +  M+  E   R  Y+  I+
Sbjct: 63  ILSIGPVHHGKKRLRDMEGHKWQYLKALLQRKPGTMVERYVKAMRELEARTRGCYAEIIK 122

Query: 260 LDSNEFVEMMLLDGCFIVEFLIKLRESSLEFIFTSKEVEEPMFNTIWILTPIVHDILLLE 81
            DS+EFV MMLLDGCFI+E  +K +   L      ++ ++P+FN   +LT +  D++LLE
Sbjct: 123 FDSDEFVTMMLLDGCFIIELFLKNKNKQL------RDEDDPIFNRTMVLTDLHRDLILLE 176

Query: 80  NQLPFFALQRLFDL 39
           NQLPFF L+ LF+L
Sbjct: 177 NQLPFFVLETLFNL 190


>ref|XP_002879612.1| hypothetical protein ARALYDRAFT_902761 [Arabidopsis lyrata subsp.
           lyrata] gi|297325451|gb|EFH55871.1| hypothetical protein
           ARALYDRAFT_902761 [Arabidopsis lyrata subsp. lyrata]
          Length = 451

 Score =  114 bits (286), Expect = 6e-24
 Identities = 59/134 (44%), Positives = 79/134 (58%)
 Frame = -1

Query: 440 VLSIGPLHRGNPKLAAMEKHKWRYFHDLLSSNPKFCLEKCLVEMKSWEEMARSFYS*TIE 261
           V+S+GP HRG  +L  +++HKWRY + LL+      LE  +  +KS EE AR  YS TI 
Sbjct: 69  VVSVGPFHRGQIRLEMIQEHKWRYLNVLLTRTQNLTLEDYMKSVKSVEEEARECYSETIH 128

Query: 260 LDSNEFVEMMLLDGCFIVEFLIKLRESSLEFIFTSKEVEEPMFNTIWILTPIVHDILLLE 81
           +DS EF EMM+LDGCF++E   K+            E  +P+    W+L     D L LE
Sbjct: 129 MDSEEFNEMMVLDGCFLLELFRKVNN------LVPFEPNDPLVAMAWVLPFFYRDFLCLE 182

Query: 80  NQLPFFALQRLFDL 39
           NQ+PFF L+ LFDL
Sbjct: 183 NQIPFFVLETLFDL 196


>ref|NP_181184.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4581143|gb|AAD24627.1| hypothetical protein
           [Arabidopsis thaliana] gi|18377795|gb|AAL67047.1|
           unknown protein [Arabidopsis thaliana]
           gi|21280851|gb|AAM45097.1| unknown protein [Arabidopsis
           thaliana] gi|330254159|gb|AEC09253.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 448

 Score =  114 bits (285), Expect = 8e-24
 Identities = 59/134 (44%), Positives = 80/134 (59%)
 Frame = -1

Query: 440 VLSIGPLHRGNPKLAAMEKHKWRYFHDLLSSNPKFCLEKCLVEMKSWEEMARSFYS*TIE 261
           V+SIGP HRG  +L  +E+HKWRY + LL+      LE  +  +K+ EE+AR  YS TI 
Sbjct: 66  VVSIGPYHRGQTQLKMIEEHKWRYLNVLLTRTQNLTLEDYMKSVKNVEEVARECYSETIH 125

Query: 260 LDSNEFVEMMLLDGCFIVEFLIKLRESSLEFIFTSKEVEEPMFNTIWILTPIVHDILLLE 81
           +DS EF EMM+LDGCF++E   K+            E  +P+    W+L     D L LE
Sbjct: 126 MDSEEFNEMMVLDGCFLLELFRKVNN------LVPFEPNDPLVAMAWVLPFFYRDFLCLE 179

Query: 80  NQLPFFALQRLFDL 39
           NQ+PFF L+ LF+L
Sbjct: 180 NQIPFFVLETLFNL 193


>emb|CBI30411.3| unnamed protein product [Vitis vinifera]
          Length = 287

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/135 (42%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
 Frame = -1

Query: 440 VLSIGPLHRGNPKLAAMEKHKWRYFHDLL--SSNPKFCLEKCLVEMKSWEEMARSFYS*T 267
           ++SIGP H+G   L AME+HKWRY   L+  + NP+  L++C   +   EE AR  Y+  
Sbjct: 79  IVSIGPFHQGKRDLLAMEEHKWRYMLSLVHRTPNPEKSLDECGKSIIELEEKARGCYAEN 138

Query: 266 IELDSNEFVEMMLLDGCFIVEFLIKLRESSLEFIFTSKEVEEPMFNTIWILTPIVHDILL 87
           I+ +  E  EM+L+DGCFI+E    LR S  +F+  S    +P+FN  W++  + HD+ L
Sbjct: 139 IKFNKKELAEMLLVDGCFILELF--LRRSLRDFVDKS----DPIFNNAWMVPTLQHDLAL 192

Query: 86  LENQLPFFALQRLFD 42
           LENQ+PFF LQ L++
Sbjct: 193 LENQIPFFVLQNLYE 207


>ref|XP_002303847.1| predicted protein [Populus trichocarpa] gi|222841279|gb|EEE78826.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  113 bits (283), Expect = 1e-23
 Identities = 62/143 (43%), Positives = 83/143 (58%)
 Frame = -1

Query: 440 VLSIGPLHRGNPKLAAMEKHKWRYFHDLLSSNPKFCLEKCLVEMKSWEEMARSFYS*TIE 261
           +LSIGP HRG  KL  ME+HK RY   LL    +  +E+ ++ M   E  AR FY  ++ 
Sbjct: 46  ILSIGPYHRGKDKLKMMEEHKKRYLQKLLQRRGESSVERYVMAMIRVEGEARKFYDQSVS 105

Query: 260 LDSNEFVEMMLLDGCFIVEFLIKLRESSLEFIFTSKEVEEPMFNTIWILTPIVHDILLLE 81
           L  +EFVEM+LLDGCFIVE + K        I   ++  +P+F   WIL+ I  D+ LLE
Sbjct: 106 LGQDEFVEMLLLDGCFIVELIRKSNN-----IPVVRDQNDPVFEVSWILSSIETDMFLLE 160

Query: 80  NQLPFFALQRLFDLAFMLNRQRF 12
           NQLPFF L  LF +   +  + F
Sbjct: 161 NQLPFFVLWELFTMTSEVQNEDF 183


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