BLASTX nr result
ID: Coptis24_contig00019437
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019437 (440 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera] 119 2e-25 ref|XP_002879612.1| hypothetical protein ARALYDRAFT_902761 [Arab... 114 6e-24 ref|NP_181184.1| uncharacterized protein [Arabidopsis thaliana] ... 114 8e-24 emb|CBI30411.3| unnamed protein product [Vitis vinifera] 113 1e-23 ref|XP_002303847.1| predicted protein [Populus trichocarpa] gi|2... 113 1e-23 >emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera] Length = 439 Score = 119 bits (299), Expect = 2e-25 Identities = 59/134 (44%), Positives = 84/134 (62%) Frame = -1 Query: 440 VLSIGPLHRGNPKLAAMEKHKWRYFHDLLSSNPKFCLEKCLVEMKSWEEMARSFYS*TIE 261 +LSIGP+H G +L ME HKW+Y LL P +E+ + M+ E R Y+ I+ Sbjct: 63 ILSIGPVHHGKKRLRDMEGHKWQYLKALLQRKPGTMVERYVKAMRELEARTRGCYAEIIK 122 Query: 260 LDSNEFVEMMLLDGCFIVEFLIKLRESSLEFIFTSKEVEEPMFNTIWILTPIVHDILLLE 81 DS+EFV MMLLDGCFI+E +K + L ++ ++P+FN +LT + D++LLE Sbjct: 123 FDSDEFVTMMLLDGCFIIELFLKNKNKQL------RDEDDPIFNRTMVLTDLHRDLILLE 176 Query: 80 NQLPFFALQRLFDL 39 NQLPFF L+ LF+L Sbjct: 177 NQLPFFVLETLFNL 190 >ref|XP_002879612.1| hypothetical protein ARALYDRAFT_902761 [Arabidopsis lyrata subsp. lyrata] gi|297325451|gb|EFH55871.1| hypothetical protein ARALYDRAFT_902761 [Arabidopsis lyrata subsp. lyrata] Length = 451 Score = 114 bits (286), Expect = 6e-24 Identities = 59/134 (44%), Positives = 79/134 (58%) Frame = -1 Query: 440 VLSIGPLHRGNPKLAAMEKHKWRYFHDLLSSNPKFCLEKCLVEMKSWEEMARSFYS*TIE 261 V+S+GP HRG +L +++HKWRY + LL+ LE + +KS EE AR YS TI Sbjct: 69 VVSVGPFHRGQIRLEMIQEHKWRYLNVLLTRTQNLTLEDYMKSVKSVEEEARECYSETIH 128 Query: 260 LDSNEFVEMMLLDGCFIVEFLIKLRESSLEFIFTSKEVEEPMFNTIWILTPIVHDILLLE 81 +DS EF EMM+LDGCF++E K+ E +P+ W+L D L LE Sbjct: 129 MDSEEFNEMMVLDGCFLLELFRKVNN------LVPFEPNDPLVAMAWVLPFFYRDFLCLE 182 Query: 80 NQLPFFALQRLFDL 39 NQ+PFF L+ LFDL Sbjct: 183 NQIPFFVLETLFDL 196 >ref|NP_181184.1| uncharacterized protein [Arabidopsis thaliana] gi|4581143|gb|AAD24627.1| hypothetical protein [Arabidopsis thaliana] gi|18377795|gb|AAL67047.1| unknown protein [Arabidopsis thaliana] gi|21280851|gb|AAM45097.1| unknown protein [Arabidopsis thaliana] gi|330254159|gb|AEC09253.1| uncharacterized protein [Arabidopsis thaliana] Length = 448 Score = 114 bits (285), Expect = 8e-24 Identities = 59/134 (44%), Positives = 80/134 (59%) Frame = -1 Query: 440 VLSIGPLHRGNPKLAAMEKHKWRYFHDLLSSNPKFCLEKCLVEMKSWEEMARSFYS*TIE 261 V+SIGP HRG +L +E+HKWRY + LL+ LE + +K+ EE+AR YS TI Sbjct: 66 VVSIGPYHRGQTQLKMIEEHKWRYLNVLLTRTQNLTLEDYMKSVKNVEEVARECYSETIH 125 Query: 260 LDSNEFVEMMLLDGCFIVEFLIKLRESSLEFIFTSKEVEEPMFNTIWILTPIVHDILLLE 81 +DS EF EMM+LDGCF++E K+ E +P+ W+L D L LE Sbjct: 126 MDSEEFNEMMVLDGCFLLELFRKVNN------LVPFEPNDPLVAMAWVLPFFYRDFLCLE 179 Query: 80 NQLPFFALQRLFDL 39 NQ+PFF L+ LF+L Sbjct: 180 NQIPFFVLETLFNL 193 >emb|CBI30411.3| unnamed protein product [Vitis vinifera] Length = 287 Score = 113 bits (283), Expect = 1e-23 Identities = 58/135 (42%), Positives = 85/135 (62%), Gaps = 2/135 (1%) Frame = -1 Query: 440 VLSIGPLHRGNPKLAAMEKHKWRYFHDLL--SSNPKFCLEKCLVEMKSWEEMARSFYS*T 267 ++SIGP H+G L AME+HKWRY L+ + NP+ L++C + EE AR Y+ Sbjct: 79 IVSIGPFHQGKRDLLAMEEHKWRYMLSLVHRTPNPEKSLDECGKSIIELEEKARGCYAEN 138 Query: 266 IELDSNEFVEMMLLDGCFIVEFLIKLRESSLEFIFTSKEVEEPMFNTIWILTPIVHDILL 87 I+ + E EM+L+DGCFI+E LR S +F+ S +P+FN W++ + HD+ L Sbjct: 139 IKFNKKELAEMLLVDGCFILELF--LRRSLRDFVDKS----DPIFNNAWMVPTLQHDLAL 192 Query: 86 LENQLPFFALQRLFD 42 LENQ+PFF LQ L++ Sbjct: 193 LENQIPFFVLQNLYE 207 >ref|XP_002303847.1| predicted protein [Populus trichocarpa] gi|222841279|gb|EEE78826.1| predicted protein [Populus trichocarpa] Length = 420 Score = 113 bits (283), Expect = 1e-23 Identities = 62/143 (43%), Positives = 83/143 (58%) Frame = -1 Query: 440 VLSIGPLHRGNPKLAAMEKHKWRYFHDLLSSNPKFCLEKCLVEMKSWEEMARSFYS*TIE 261 +LSIGP HRG KL ME+HK RY LL + +E+ ++ M E AR FY ++ Sbjct: 46 ILSIGPYHRGKDKLKMMEEHKKRYLQKLLQRRGESSVERYVMAMIRVEGEARKFYDQSVS 105 Query: 260 LDSNEFVEMMLLDGCFIVEFLIKLRESSLEFIFTSKEVEEPMFNTIWILTPIVHDILLLE 81 L +EFVEM+LLDGCFIVE + K I ++ +P+F WIL+ I D+ LLE Sbjct: 106 LGQDEFVEMLLLDGCFIVELIRKSNN-----IPVVRDQNDPVFEVSWILSSIETDMFLLE 160 Query: 80 NQLPFFALQRLFDLAFMLNRQRF 12 NQLPFF L LF + + + F Sbjct: 161 NQLPFFVLWELFTMTSEVQNEDF 183