BLASTX nr result
ID: Coptis24_contig00019425
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019425 (2188 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI40063.3| unnamed protein product [Vitis vinifera] 197 7e-80 ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 prote... 197 2e-64 ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putativ... 181 7e-43 ref|NP_568586.2| Sister chromatid cohesion 1 protein 2 [Arabidop... 133 2e-28 ref|NP_851110.1| Sister chromatid cohesion 1 protein 2 [Arabidop... 132 5e-28 >emb|CBI40063.3| unnamed protein product [Vitis vinifera] Length = 621 Score = 197 bits (502), Expect(2) = 7e-80 Identities = 158/488 (32%), Positives = 236/488 (48%), Gaps = 17/488 (3%) Frame = -2 Query: 1626 EDAGNEQYFMNKYFHEEEFARFEIRDVVHTPVRDALSPQSMEKYTEIFQSQIVTNSEASL 1447 ++ G YF+++Y E+ ++ E + P D L P M+ + +++ EAS+ Sbjct: 178 KNEGIRHYFLDQYRFEDVASQPETCSTISPPDEDFLLPCLMDTAQLVSSLHDLSSIEASM 237 Query: 1446 EKLQG---HPKEFPDIETNCEAE----EPMDRFPDVGLNGEDE--ESMDLEPQFNKVDGQ 1294 EK + E D++ E P D + NGE E E + ++V + Sbjct: 238 EKFRDCSFSQGECLDLQLFHRVEIDIGGPFDG--EHHSNGEQTSLEMTSSENRRHQVTIE 295 Query: 1293 AKQIRN-LEITPLDPEKSGIPTEGGLAAITTDGTPHGSSFPYDSGAATPEFVVIQTPAKK 1117 + N + TP K + EG T D TP S+ P SG+ TPEF+++ TP KK Sbjct: 296 CHSVPNTFDATP--QSKLQVTAEGHRVTNTLDATPE-SNLPDASGSTTPEFIIVHTPTKK 352 Query: 1116 EQPRFSRKRKHLIDNMMVLANEVIRKSLEDSSSLVVKRRKVPATALDVWNAQIFTNQYQN 937 E R RKRK L D +VL++E ++KS++ SS L+ KRRKVP TA D W N Q Sbjct: 353 EHARIPRKRKCLFDEKIVLSSEFLKKSIQSSSDLIRKRRKVPHTAYDAWKVYQIANLSQG 412 Query: 936 FLEPLIPC-TPQLKTLFH-RRIGAPE---PLEASEGAVKLGEERCVPQRECSEDRTCSQE 772 FLE LIPC + +L++LFH +++ PE +EA +G V G Sbjct: 413 FLEALIPCISLELRSLFHAKKLMTPELVVNVEAPDGLVVPGSP----------------- 455 Query: 771 NVINHSSRRSVEIPPEPLQASEGPVMLGEDRCEPNRECSEDRACSQQNVIDHSRRPAEIP 592 +N + + P P S ++G +E+ Sbjct: 456 -TVNQLLKETAIAPETPAIHS---TLMG---------------------------VSEVH 484 Query: 591 ETSKSDRIVPMTLLSGGEDGLLETETQSSGLNLMDEELGPQEDNNSNNQNGWTVRTRMVA 412 + + SDR+VP + + +E + + LM+EE+ E N NGW+ RT MVA Sbjct: 485 KLTDSDRVVPASSFESSQQRQSSSENEEFDI-LMNEEINSCEVAN-QKINGWSDRTGMVA 542 Query: 411 SFLCKRFL--KEPGKAEVLNLNLILEGKTRKENARLFYEILVLKSEGLVDVKQDTPYGDI 238 +LC+ FL K+ G + L+ L GKT+KE++RLFYEILVLKS+G VDV+Q+ YGDI Sbjct: 543 RYLCRSFLNQKKQGDENAVTLSQFLTGKTKKESSRLFYEILVLKSKGYVDVEQNNAYGDI 602 Query: 237 CVLNTPQM 214 V+ T QM Sbjct: 603 RVMKTLQM 610 Score = 128 bits (322), Expect(2) = 7e-80 Identities = 70/142 (49%), Positives = 94/142 (66%), Gaps = 4/142 (2%) Frame = -1 Query: 2089 MFYSQCLLSKKGTLKSIWVAAYFHKKLKKQQVADTHIPSSVDMIILNEVS-XXXXXXXXX 1913 MF SQ LLS+KG L+S+W AAYFHKKLKK QV T+I SSVD I+++EV Sbjct: 1 MFESQSLLSRKGALRSVWEAAYFHKKLKKAQVTQTNISSSVDKILVDEVPVLAYRILGYI 60 Query: 1912 XXXXXRIFSKKVEYLYHDCSEVLTKIKTYT---PLHKPKEGMCASYASITIPERFELDGF 1742 RI+SKKVEYL+ DC ++L K+K + + EG A SIT+P+ FELD F Sbjct: 61 LLGVVRIYSKKVEYLFDDCQKMLIKVKDFAVGKQFNADMEGFSAPCFSITLPKTFELDAF 120 Query: 1741 DLELPDDMNGGSVLPNQKITLE 1676 DLE+ +D++GG+V P ++ITL+ Sbjct: 121 DLEVLEDVSGGNVRPQEEITLQ 142 >ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Vitis vinifera] Length = 756 Score = 197 bits (502), Expect(2) = 2e-64 Identities = 158/488 (32%), Positives = 236/488 (48%), Gaps = 17/488 (3%) Frame = -2 Query: 1626 EDAGNEQYFMNKYFHEEEFARFEIRDVVHTPVRDALSPQSMEKYTEIFQSQIVTNSEASL 1447 ++ G YF+++Y E+ ++ E + P D L P M+ + +++ EAS+ Sbjct: 313 KNEGIRHYFLDQYRFEDVASQPETCSTISPPDEDFLLPCLMDTAQLVSSLHDLSSIEASM 372 Query: 1446 EKLQG---HPKEFPDIETNCEAE----EPMDRFPDVGLNGEDE--ESMDLEPQFNKVDGQ 1294 EK + E D++ E P D + NGE E E + ++V + Sbjct: 373 EKFRDCSFSQGECLDLQLFHRVEIDIGGPFDG--EHHSNGEQTSLEMTSSENRRHQVTIE 430 Query: 1293 AKQIRN-LEITPLDPEKSGIPTEGGLAAITTDGTPHGSSFPYDSGAATPEFVVIQTPAKK 1117 + N + TP K + EG T D TP S+ P SG+ TPEF+++ TP KK Sbjct: 431 CHSVPNTFDATP--QSKLQVTAEGHRVTNTLDATPE-SNLPDASGSTTPEFIIVHTPTKK 487 Query: 1116 EQPRFSRKRKHLIDNMMVLANEVIRKSLEDSSSLVVKRRKVPATALDVWNAQIFTNQYQN 937 E R RKRK L D +VL++E ++KS++ SS L+ KRRKVP TA D W N Q Sbjct: 488 EHARIPRKRKCLFDEKIVLSSEFLKKSIQSSSDLIRKRRKVPHTAYDAWKVYQIANLSQG 547 Query: 936 FLEPLIPC-TPQLKTLFH-RRIGAPE---PLEASEGAVKLGEERCVPQRECSEDRTCSQE 772 FLE LIPC + +L++LFH +++ PE +EA +G V G Sbjct: 548 FLEALIPCISLELRSLFHAKKLMTPELVVNVEAPDGLVVPGSP----------------- 590 Query: 771 NVINHSSRRSVEIPPEPLQASEGPVMLGEDRCEPNRECSEDRACSQQNVIDHSRRPAEIP 592 +N + + P P S ++G +E+ Sbjct: 591 -TVNQLLKETAIAPETPAIHS---TLMG---------------------------VSEVH 619 Query: 591 ETSKSDRIVPMTLLSGGEDGLLETETQSSGLNLMDEELGPQEDNNSNNQNGWTVRTRMVA 412 + + SDR+VP + + +E + + LM+EE+ E N NGW+ RT MVA Sbjct: 620 KLTDSDRVVPASSFESSQQRQSSSENEEFDI-LMNEEINSCEVAN-QKINGWSDRTGMVA 677 Query: 411 SFLCKRFL--KEPGKAEVLNLNLILEGKTRKENARLFYEILVLKSEGLVDVKQDTPYGDI 238 +LC+ FL K+ G + L+ L GKT+KE++RLFYEILVLKS+G VDV+Q+ YGDI Sbjct: 678 RYLCRSFLNQKKQGDENAVTLSQFLTGKTKKESSRLFYEILVLKSKGYVDVEQNNAYGDI 737 Query: 237 CVLNTPQM 214 V+ T QM Sbjct: 738 RVMKTLQM 745 Score = 77.4 bits (189), Expect(2) = 2e-64 Identities = 37/81 (45%), Positives = 57/81 (70%), Gaps = 3/81 (3%) Frame = -1 Query: 1894 IFSKKVEYLYHDCSEVLTKIKTYT---PLHKPKEGMCASYASITIPERFELDGFDLELPD 1724 I+SKKVEYL+ DC ++L K+K + + EG A SIT+P+ FELD FDLE+ + Sbjct: 234 IYSKKVEYLFDDCQKMLIKVKDFAVGKQFNADMEGFSAPCFSITLPKTFELDAFDLEVLE 293 Query: 1723 DMNGGSVLPNQKITLEERLED 1661 D++GG+V P ++ITL++ L++ Sbjct: 294 DVSGGNVRPQEEITLQDTLKN 314 Score = 60.8 bits (146), Expect = 1e-06 Identities = 29/41 (70%), Positives = 33/41 (80%) Frame = -1 Query: 2089 MFYSQCLLSKKGTLKSIWVAAYFHKKLKKQQVADTHIPSSV 1967 MF SQ LLS+KG L+S+W AAYFHKKLKK QV T+I SSV Sbjct: 110 MFESQSLLSRKGALRSVWEAAYFHKKLKKAQVTQTNISSSV 150 >ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putative [Ricinus communis] gi|223549451|gb|EEF50939.1| Sister chromatid cohesion 1 protein, putative [Ricinus communis] Length = 781 Score = 181 bits (459), Expect = 7e-43 Identities = 156/467 (33%), Positives = 219/467 (46%), Gaps = 49/467 (10%) Frame = -2 Query: 1470 VTNSEASLEKLQGH---PKEFPDIETNCEAEEPMDR---FPDVGLNGE--------DEES 1333 ++N E S+EKL+ + +E DIE C EEP + PD + DE Sbjct: 309 ISNLEVSIEKLRENMVAQEECRDIEMFCMVEEPPEENRSIPDKHKSNTEHKMLYRVDELP 368 Query: 1332 MDLEPQFNKVDGQAKQIRNLEITPLDPEKSGIPTEGGLAAITTDGTPHGSSFPYDSGAAT 1153 D P + A+ L++T TE ++T D TP FP SGA T Sbjct: 369 EDTRPFGEEHQSSAEHETLLQMTSPRNSTYEALTEDHPLSVTLDTTPR-PRFPNASGAMT 427 Query: 1152 PEFVVIQTPAKKEQPRFSRKRKHLIDNMMVLANEVIRKSLEDSSSLVVKRRKVPATALDV 973 PE VI TPA KE R RKRK + D+ +V N VI++ +EDSS LV KR+K P TAL Sbjct: 428 PEISVIPTPAAKEGARVPRKRKCVFDDTIVFPNNVIKQCIEDSSDLVSKRKKAPHTALTA 487 Query: 972 WNAQIFTNQYQNFLEPLIPCT-PQLKTLFHRR---------------------------- 880 W A + + FLE LIPCT L++L + Sbjct: 488 WRASRVSRLPRCFLESLIPCTASDLRSLLSGKKLKISESLDTVRVPQTFTSECPTARRSV 547 Query: 879 --IGAPEPLEASEGAVKLGEERCVPQRECSEDRTCSQENVINHSSRRSVEIPPEPLQASE 706 + +PE L+ S+ V + R V + E S ++ ++VE P L SE Sbjct: 548 ETVESPEKLDKSKILV---DGRLVETMDSLEKLNVSASPAVDRQG-KTVE-PRATLGMSE 602 Query: 705 GPVMLGEDRCEPNRECSEDRACSQQNVI-DHSRRPAEIPETSKSDRIVPMTLLSGG-EDG 532 P + R ++R + ++ S R E PE + + + L S E Sbjct: 603 SPTAI--------RSLEQERIAPETPILHTKSLRTFESPERPEISNLDRVRLESERVEKE 654 Query: 531 LLETETQSSGLNLMDEELGPQEDNNSNNQNGWTVRTRMVASFLCKRFLKEPGK--AEVLN 358 L ++ LN+M+EE+ E +N NQ GW+ RTR+ L + FLK+ + EV+N Sbjct: 655 LSPSKGHELDLNMMNEEISSDEGDN-QNQYGWSGRTRVAVRCLHRSFLKQKNRREEEVVN 713 Query: 357 LNLILEGKTRKENARLFYEILVLKSEGLVDVKQDTPYGDICVLNTPQ 217 L +LEG+ +KE+ARLFYEILVLKS+G V VKQ+ YGDI V Q Sbjct: 714 LLSLLEGRAKKESARLFYEILVLKSKGYVHVKQENAYGDILVWKASQ 760 Score = 132 bits (331), Expect = 5e-28 Identities = 72/143 (50%), Positives = 98/143 (68%), Gaps = 4/143 (2%) Frame = -1 Query: 2089 MFYSQCLLSKKGTLKSIWVAAYFHKKLKKQQVADTHIPSSVDMIILNEV-SXXXXXXXXX 1913 MFYS LS+KG L +IWVAAY KKLKK QV T I SSVD I+ +E + Sbjct: 1 MFYSHSFLSRKGPLGAIWVAAYCFKKLKKAQVTQTDIASSVDKILQDEFDAVTYRVLAYL 60 Query: 1912 XXXXXRIFSKKVEYLYHDCSEVLTKIKTYTPLHKPK---EGMCASYASITIPERFELDGF 1742 RIFSKKVEYL+ DC++VL KIK + +K + E +CA Y+SIT+PERFELD F Sbjct: 61 LLGVVRIFSKKVEYLFDDCNKVLLKIKDFMVRNKERALMETLCAPYSSITLPERFELDAF 120 Query: 1741 DLELPDDMNGGSVLPNQKITLEE 1673 +LE+ +D++GG+V+P++ IT+++ Sbjct: 121 NLEIIEDISGGNVVPSEDITVKD 143 >ref|NP_568586.2| Sister chromatid cohesion 1 protein 2 [Arabidopsis thaliana] gi|30913286|sp|Q9FQ20.2|SCC12_ARATH RecName: Full=Sister chromatid cohesion 1 protein 2; AltName: Full=SCC1 homolog 2; Short=AtRAD21-1 gi|18157643|gb|AAL62057.1|AF400126_1 RAD21-1 variant 1 [Arabidopsis thaliana] gi|332007220|gb|AED94603.1| Sister chromatid cohesion 1 protein 2 [Arabidopsis thaliana] Length = 810 Score = 133 bits (334), Expect = 2e-28 Identities = 135/479 (28%), Positives = 211/479 (44%), Gaps = 63/479 (13%) Frame = -2 Query: 1458 EASLEKLQGHPK-EFPDIETNCEAEEPMDRFPDVGLNGEDEE-------SMDLEPQFNKV 1303 + +EK + H + E D E + + +V L+G ++ S D +FN Sbjct: 360 QEGVEKCRDHNEAEMADFELFHGSHKEQSETSEVNLHGSEKGFLSDMTVSKDPSSEFNAT 419 Query: 1302 DGQAKQIRNLEITPLDPEKSGIPTEGGLAAITTDGTPHGSSFPYDSGAATPEFVVIQTPA 1123 D + +TP P + I +EGG +P+F +I TPA Sbjct: 420 DTP------VTVTPKTPSRLKI-SEGG---------------------TSPQFSIIPTPA 451 Query: 1122 KKEQPRFSRKRKHLIDNMMVLANEVIRKSLEDSSSLVVKRRKVPATALDVWNAQIFTNQY 943 KE R SRKRK LID+ +++ N+V+++ +EDSS L+ KRR VP T + F N + Sbjct: 452 AKESSRVSRKRKCLIDDEVIIPNKVMKEMIEDSSKLLAKRRNVPHTDCPERRTKRFANPF 511 Query: 942 QNFLEPLIPC-TPQLKTLFHRRI--------GAPEPLEASEGAVK------------LGE 826 ++FLEPLI + L++LF + I G P+ + + K L Sbjct: 512 RSFLEPLIQYGSSDLQSLFCQPIKLKNWATTGTPKDTKIARHKEKSSLDTVRSPGVILSS 571 Query: 825 ERCVPQRECSEDR----------TCSQENVIN-------------HSSRRSVEIPPEP-L 718 ++ +E E T NV++ H + + E P +P + Sbjct: 572 DQTENTQEIMETPQAAALAGLKVTAGNSNVVSVEMGASSTTSGTAHQTENAAETPVKPSV 631 Query: 717 QASEGPVMLGEDR--CEPNRECSEDRACSQQNVI--DHSRRPAEIPET--SKSDRIVPMT 556 A E PV E SE + + + S+R + P T KS P T Sbjct: 632 IAPETPVRTSEQTVIAPETPVVSEQVEIAPETPVRESMSKRFFKDPGTCYKKSRPASPFT 691 Query: 555 LLSGGEDGLLETETQSSGLNLMDEELGPQEDNNSNNQNGWTVRTRMVASFLCKRFL--KE 382 + E + LM++E ++ Q W+ RTR VA FL K FL +E Sbjct: 692 SFE-EHPSVYYVENRDLDTILMNDEQVNADERQDLQQETWSSRTRNVAKFLEKTFLEQRE 750 Query: 381 PGKAEVLNLNLILEGKTRKENARLFYEILVLKSEGLVDVKQDTPYGDICVL--NTPQMA 211 + E ++L + G+T+KE+ARLFYE LVLK++G V+VKQ+ PY D+ ++ + PQ A Sbjct: 751 REEEEKVSLLQLCRGRTQKESARLFYETLVLKTKGYVEVKQNHPYSDVFLMRVSRPQKA 809 Score = 122 bits (306), Expect = 4e-25 Identities = 67/146 (45%), Positives = 92/146 (63%), Gaps = 7/146 (4%) Frame = -1 Query: 2089 MFYSQCLLSKKGTLKSIWVAAYFHKKLKKQQVADTHIPSSVDMIILNEV-SXXXXXXXXX 1913 MFYS CL+S+KG L +IWVAAYF KKLKK QV THIPSSVD I+ E+ + Sbjct: 1 MFYSHCLVSRKGPLGAIWVAAYFFKKLKKSQVKATHIPSSVDQILQKELDALTYRVLAYL 60 Query: 1912 XXXXXRIFSKKVEYLYHDCSEVLTKIKTYTPLHKPKEGMCASYA------SITIPERFEL 1751 RI+SKKV++L+ DC++ L +K + + +E S SI +PERFEL Sbjct: 61 LLGVVRIYSKKVDFLFDDCNKALIGVKEFVAKERNREKTGVSLPASIECFSIALPERFEL 120 Query: 1750 DGFDLELPDDMNGGSVLPNQKITLEE 1673 D FDL + +D +GG+V P++ ITL++ Sbjct: 121 DAFDLGVLEDFHGGNVKPHEDITLKD 146 >ref|NP_851110.1| Sister chromatid cohesion 1 protein 2 [Arabidopsis thaliana] gi|18157645|gb|AAL62058.1|AF400127_1 RAD21-1 variant 2 [Arabidopsis thaliana] gi|332007219|gb|AED94602.1| Sister chromatid cohesion 1 protein 2 [Arabidopsis thaliana] Length = 809 Score = 132 bits (331), Expect = 5e-28 Identities = 136/479 (28%), Positives = 211/479 (44%), Gaps = 63/479 (13%) Frame = -2 Query: 1458 EASLEKLQGHPK-EFPDIETNCEAEEPMDRFPDVGLNGEDEE-------SMDLEPQFNKV 1303 + +EK + H + E D E + + +V L+G ++ S D +FN Sbjct: 360 QEGVEKCRDHNEAEMADFELFHGSHKEQSETSEVNLHGSEKGFLSDMTVSKDPSSEFNAT 419 Query: 1302 DGQAKQIRNLEITPLDPEKSGIPTEGGLAAITTDGTPHGSSFPYDSGAATPEFVVIQTPA 1123 D + +TP P + I +EGG +P+F +I TPA Sbjct: 420 DTP------VTVTPKTPSRLKI-SEGG---------------------TSPQFSIIPTPA 451 Query: 1122 KKEQPRFSRKRKHLIDNMMVLANEVIRKSLEDSSSLVVKRRKVPATALDVWNAQIFTNQY 943 KE R SRKRK LID+ +++ N+V+++ +EDSS L+ KRR VP T + F N + Sbjct: 452 AKESSRVSRKRKCLIDDEVIIPNKVMKEMIEDSSKLLAKRRNVPHTDCPERRTKRFANPF 511 Query: 942 QNFLEPLIPC-TPQLKTLFHRRI--------GAPEPLEASEGAVK------------LGE 826 ++FLEPLI + L++LF + I G P+ + + K L Sbjct: 512 RSFLEPLIQYGSSDLQSLFCQPIKLKNWATTGTPKDTKIARHKEKSSLDTVRSPGVILSS 571 Query: 825 ERCVPQRECSEDR----------TCSQENVIN-------------HSSRRSVEIPPEP-L 718 ++ +E E T NV++ H + + E P +P + Sbjct: 572 DQTENTQEIMETPQAAALAGLKVTAGNSNVVSVEMGASSTTSGTAHQTENAAETPVKPSV 631 Query: 717 QASEGPVMLGEDR--CEPNRECSEDRACSQQNVI--DHSRRPAEIPET--SKSDRIVPMT 556 A E PV E SE + + + S+R + P T KS P T Sbjct: 632 IAPETPVRTSEQTVIAPETPVVSEQVEIAPETPVRESMSKRFFKDPGTCYKKSRPASPFT 691 Query: 555 LLSGGEDGLLETETQSSGLNLMDEELGPQEDNNSNNQNGWTVRTRMVASFLCKRFL--KE 382 + E + LM++E+ E Q W+ RTR VA FL K FL +E Sbjct: 692 SFE-EHPSVYYVENRDLDTILMNDEVNADE-RQDLQQETWSSRTRNVAKFLEKTFLEQRE 749 Query: 381 PGKAEVLNLNLILEGKTRKENARLFYEILVLKSEGLVDVKQDTPYGDICVL--NTPQMA 211 + E ++L + G+T+KE+ARLFYE LVLK++G V+VKQ+ PY D+ ++ + PQ A Sbjct: 750 REEEEKVSLLQLCRGRTQKESARLFYETLVLKTKGYVEVKQNHPYSDVFLMRVSRPQKA 808 Score = 122 bits (306), Expect = 4e-25 Identities = 67/146 (45%), Positives = 92/146 (63%), Gaps = 7/146 (4%) Frame = -1 Query: 2089 MFYSQCLLSKKGTLKSIWVAAYFHKKLKKQQVADTHIPSSVDMIILNEV-SXXXXXXXXX 1913 MFYS CL+S+KG L +IWVAAYF KKLKK QV THIPSSVD I+ E+ + Sbjct: 1 MFYSHCLVSRKGPLGAIWVAAYFFKKLKKSQVKATHIPSSVDQILQKELDALTYRVLAYL 60 Query: 1912 XXXXXRIFSKKVEYLYHDCSEVLTKIKTYTPLHKPKEGMCASYA------SITIPERFEL 1751 RI+SKKV++L+ DC++ L +K + + +E S SI +PERFEL Sbjct: 61 LLGVVRIYSKKVDFLFDDCNKALIGVKEFVAKERNREKTGVSLPASIECFSIALPERFEL 120 Query: 1750 DGFDLELPDDMNGGSVLPNQKITLEE 1673 D FDL + +D +GG+V P++ ITL++ Sbjct: 121 DAFDLGVLEDFHGGNVKPHEDITLKD 146