BLASTX nr result

ID: Coptis24_contig00019416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019416
         (887 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532238.1| transcription factor, putative [Ricinus comm...   177   4e-42
ref|XP_002268816.1| PREDICTED: auxin-responsive protein IAA33 [V...   171   3e-40
ref|XP_002864517.1| indoleacetic acid-induced protein 33 [Arabid...   168   1e-39
gb|ADL70834.1| indole-3-acetic acid inducible 33 [Arabidopsis th...   167   2e-39
gb|ADL70833.1| indole-3-acetic acid inducible 33 [Arabidopsis th...   167   2e-39

>ref|XP_002532238.1| transcription factor, putative [Ricinus communis]
           gi|223528072|gb|EEF30147.1| transcription factor,
           putative [Ricinus communis]
          Length = 173

 Score =  177 bits (448), Expect = 4e-42
 Identities = 92/125 (73%), Positives = 104/125 (83%), Gaps = 5/125 (4%)
 Frame = +1

Query: 361 NLPSFPSI---EDDFVSTMVPQVTVVLEGRSICQRISLDKHASYQSLAKALRQMFVDESD 531
           N   FP++   +DD VST+VP VTVVLEGRSICQRISL KHASYQSLA ALRQMFVD  D
Sbjct: 49  NSKPFPALYDDDDDLVSTVVPPVTVVLEGRSICQRISLHKHASYQSLAMALRQMFVDGGD 108

Query: 532 LEVL--SDKELDLSNAIPGHVIAYEDMEDDLLLVGDLNWKDFVRVAKRIRVIPVKANSRK 705
              +  SD +LDL+NA+PGH+IAYEDME+DLLL GDLNWKDFVRVAKRIR++PVK NSRK
Sbjct: 109 AGGVTDSDTDLDLTNAVPGHLIAYEDMENDLLLAGDLNWKDFVRVAKRIRILPVKGNSRK 168

Query: 706 GRRGA 720
           GR GA
Sbjct: 169 GRGGA 173


>ref|XP_002268816.1| PREDICTED: auxin-responsive protein IAA33 [Vitis vinifera]
           gi|297735399|emb|CBI17839.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score =  171 bits (432), Expect = 3e-40
 Identities = 87/123 (70%), Positives = 102/123 (82%), Gaps = 4/123 (3%)
 Frame = +1

Query: 361 NLPSFPSI-EDDFVSTMVPQVTVVLEGRSICQRISLDKHASYQSLAKALRQMFVDESDLE 537
           ++ +FP + +DD V+ +VP VTVVLEGRSIC RISL  HASYQSLA+ALRQMFVD S  +
Sbjct: 45  SIQTFPGLADDDLVAAVVPPVTVVLEGRSICHRISLHSHASYQSLARALRQMFVDGSSAD 104

Query: 538 VLS---DKELDLSNAIPGHVIAYEDMEDDLLLVGDLNWKDFVRVAKRIRVIPVKANSRKG 708
           V +   D ELDLSNA+PGH+IAYEDME+DLLL GDLNWKDFVRVAKRIR++P K NSRKG
Sbjct: 105 VGAAGGDHELDLSNAVPGHLIAYEDMENDLLLAGDLNWKDFVRVAKRIRILPAKRNSRKG 164

Query: 709 RRG 717
           R G
Sbjct: 165 RGG 167


>ref|XP_002864517.1| indoleacetic acid-induced protein 33 [Arabidopsis lyrata subsp.
           lyrata] gi|297310352|gb|EFH40776.1| indoleacetic
           acid-induced protein 33 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 171

 Score =  168 bits (426), Expect = 1e-39
 Identities = 85/112 (75%), Positives = 97/112 (86%)
 Frame = +1

Query: 379 SIEDDFVSTMVPQVTVVLEGRSICQRISLDKHASYQSLAKALRQMFVDESDLEVLSDKEL 558
           ++EDD VS++VP VTVVLEGRSICQRISLDKH SYQSLA ALRQMFVD +D    S  +L
Sbjct: 62  NVEDDLVSSVVPPVTVVLEGRSICQRISLDKHGSYQSLALALRQMFVDGAD----STDDL 117

Query: 559 DLSNAIPGHVIAYEDMEDDLLLVGDLNWKDFVRVAKRIRVIPVKANSRKGRR 714
           DLSNAIPGH+IAYEDME+DLLL GDL WKDFVRVAKRIR++PVK N+RK +R
Sbjct: 118 DLSNAIPGHLIAYEDMENDLLLAGDLTWKDFVRVAKRIRILPVKGNTRKVKR 169


>gb|ADL70834.1| indole-3-acetic acid inducible 33 [Arabidopsis thaliana]
           gi|304322745|gb|ADL70843.1| indole-3-acetic acid
           inducible 33 [Arabidopsis thaliana]
          Length = 170

 Score =  167 bits (424), Expect = 2e-39
 Identities = 84/112 (75%), Positives = 97/112 (86%)
 Frame = +1

Query: 379 SIEDDFVSTMVPQVTVVLEGRSICQRISLDKHASYQSLAKALRQMFVDESDLEVLSDKEL 558
           ++EDD VS++VP VTVVLEGRSICQRISLDKH SYQSLA ALRQMFVD +D    S  +L
Sbjct: 61  NVEDDLVSSVVPPVTVVLEGRSICQRISLDKHGSYQSLASALRQMFVDGAD----STDDL 116

Query: 559 DLSNAIPGHVIAYEDMEDDLLLVGDLNWKDFVRVAKRIRVIPVKANSRKGRR 714
           DLSNAIPGH+IAYEDME+DLLL GDL WKDFVRVAKRIR++PVK N+R+ +R
Sbjct: 117 DLSNAIPGHLIAYEDMENDLLLAGDLTWKDFVRVAKRIRILPVKGNTRQVKR 168


>gb|ADL70833.1| indole-3-acetic acid inducible 33 [Arabidopsis thaliana]
           gi|304322731|gb|ADL70836.1| indole-3-acetic acid
           inducible 33 [Arabidopsis thaliana]
           gi|304322737|gb|ADL70839.1| indole-3-acetic acid
           inducible 33 [Arabidopsis thaliana]
          Length = 170

 Score =  167 bits (424), Expect = 2e-39
 Identities = 84/112 (75%), Positives = 97/112 (86%)
 Frame = +1

Query: 379 SIEDDFVSTMVPQVTVVLEGRSICQRISLDKHASYQSLAKALRQMFVDESDLEVLSDKEL 558
           ++EDD VS++VP VTVVLEGRSICQRISLDKH SYQSLA ALRQMFVD +D    S  +L
Sbjct: 61  NVEDDLVSSVVPPVTVVLEGRSICQRISLDKHGSYQSLASALRQMFVDGAD----STDDL 116

Query: 559 DLSNAIPGHVIAYEDMEDDLLLVGDLNWKDFVRVAKRIRVIPVKANSRKGRR 714
           DLSNAIPGH+IAYEDME+DLLL GDL WKDFVRVAKRIR++PVK N+R+ +R
Sbjct: 117 DLSNAIPGHLIAYEDMENDLLLAGDLTWKDFVRVAKRIRILPVKGNTRQVKR 168


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