BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019411
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002952333.1| 26S proteasome regulatory complex [Volvox ca...    44   2e-08
ref|XP_766232.1| 26S proteasome regulatory subunit 7 [Theileria ...    47   2e-08
ref|XP_003627480.1| 26S protease regulatory subunit [Medicago tr...    45   2e-08
ref|XP_003567074.1| PREDICTED: LOW QUALITY PROTEIN: 26S protease...    46   2e-08
ref|XP_002142646.1| 26S proteasome regulatory subunit 7 [Cryptos...    45   4e-08

>ref|XP_002952333.1| 26S proteasome regulatory complex [Volvox carteri f. nagariensis]
           gi|300262269|gb|EFJ46476.1| 26S proteasome regulatory
           complex [Volvox carteri f. nagariensis]
          Length = 426

 Score = 43.5 bits (101), Expect(2) = 2e-08
 Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
 Frame = +2

Query: 17  VANRSDP*FICVIQSEHSCWRVYNGTR-VRELYQSARSEKAHILFFKEVN 163
           VANR+D  FI VI SE     V  G R VREL+Q ARS+KA I+FF EV+
Sbjct: 222 VANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVD 271



 Score = 40.8 bits (94), Expect(2) = 2e-08
 Identities = 32/73 (43%), Positives = 37/73 (50%), Gaps = 22/73 (30%)
 Frame = +3

Query: 240 FDAQRSDKVLVETNRPDTLDAA-------DTSWTFKIPQVT-------------NCE-DI 356
           FDA+ + KVL+ TNRPDTLD A       D    F +P +              NCE DI
Sbjct: 302 FDARGNVKVLMATNRPDTLDPALLRPGRLDRKVEFSLPDLASRTQIFQIHTRTMNCERDI 361

Query: 357 -IELLARLFPNFT 392
             ELLARL PN T
Sbjct: 362 RFELLARLCPNST 374


>ref|XP_766232.1| 26S proteasome regulatory subunit 7 [Theileria parva strain Muguga]
           gi|68353189|gb|EAN33949.1| 26S proteasome regulatory
           subunit 7, putative [Theileria parva]
          Length = 425

 Score = 47.0 bits (110), Expect(2) = 2e-08
 Identities = 30/50 (60%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
 Frame = +2

Query: 17  VANRSDP*FICVIQSEHSCWRVYNGTR-VRELYQSARSEKAHILFFKEVN 163
           VANR+D  FICVI SE     V  G R VREL+Q ARS+KA ILF  EV+
Sbjct: 221 VANRTDACFICVIGSELVQKYVGEGARLVRELFQMARSKKACILFIDEVD 270



 Score = 37.4 bits (85), Expect(2) = 2e-08
 Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 22/73 (30%)
 Frame = +3

Query: 240 FDAQRSDKVLVETNRPDTLDAA-------DTSWTFKIPQVTNCEDII------------- 359
           FDA+ + KVL+ TNRPDTLD+A       D    F +P +   + I              
Sbjct: 301 FDARGNIKVLMATNRPDTLDSALLRPGRIDRRIEFGLPDLEGRKHIFKIHSRTMSVDKNI 360

Query: 360 --ELLARLFPNFT 392
             ELLARL PN T
Sbjct: 361 RYELLARLCPNST 373


>ref|XP_003627480.1| 26S protease regulatory subunit [Medicago truncatula]
           gi|355521502|gb|AET01956.1| 26S protease regulatory
           subunit [Medicago truncatula]
          Length = 411

 Score = 44.7 bits (104), Expect(2) = 2e-08
 Identities = 30/54 (55%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
 Frame = +2

Query: 5   KYLGVANRSDP*FICVIQSEHSCWRVYNGTR-VRELYQSARSEKAHILFFKEVN 163
           K + VANR+D  FI VI SE     V  G R VREL+Q ARS+KA I+FF EV+
Sbjct: 203 KGVAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVD 256



 Score = 39.7 bits (91), Expect(2) = 2e-08
 Identities = 32/73 (43%), Positives = 37/73 (50%), Gaps = 22/73 (30%)
 Frame = +3

Query: 240 FDAQRSDKVLVETNRPDTLDAA-------DTSWTFKIP-------------QVTNCE-DI 356
           FDA+ + KVL+ TNRPDTLD A       D    F +P             +  NCE DI
Sbjct: 287 FDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDI 346

Query: 357 -IELLARLFPNFT 392
             ELLARL PN T
Sbjct: 347 RFELLARLCPNST 359


>ref|XP_003567074.1| PREDICTED: LOW QUALITY PROTEIN: 26S protease regulatory subunit
           7-like [Brachypodium distachyon]
          Length = 367

 Score = 45.8 bits (107), Expect(2) = 2e-08
 Identities = 27/49 (55%), Positives = 33/49 (67%)
 Frame = +2

Query: 17  VANRSDP*FICVIQSEHSCWRVYNGTRVRELYQSARSEKAHILFFKEVN 163
           VANR+D  FI VI SE S +       VREL++ ARSEKA I+FF EV+
Sbjct: 164 VANRTDACFIRVIGSELSXYVGEGARMVRELFEMARSEKACIVFFDEVD 212



 Score = 38.5 bits (88), Expect(2) = 2e-08
 Identities = 32/73 (43%), Positives = 36/73 (49%), Gaps = 22/73 (30%)
 Frame = +3

Query: 240 FDAQRSDKVLVETNRPDTLDAA-------DTSWTFKIP-------------QVTNCE-DI 356
           FDA  + KVL+ TNRPDTLD A       D    F +P             +  NCE DI
Sbjct: 243 FDAGGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFRIHTRTMNCERDI 302

Query: 357 -IELLARLFPNFT 392
             ELLARL PN T
Sbjct: 303 RFELLARLCPNST 315


>ref|XP_002142646.1| 26S proteasome regulatory subunit 7 [Cryptosporidium muris RN66]
           gi|209558252|gb|EEA08297.1| 26S proteasome regulatory
           subunit 7, putative [Cryptosporidium muris RN66]
          Length = 431

 Score = 45.1 bits (105), Expect(2) = 4e-08
 Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
 Frame = +2

Query: 17  VANRSDP*FICVIQSEHSCWRVYNGTR-VRELYQSARSEKAHILFFKEVN 163
           VANR+D  FICVI SE     V  G R VREL++ ARS+KA ILF  EV+
Sbjct: 227 VANRTDACFICVIGSELVQKYVGEGARMVRELFRLARSKKACILFIDEVD 276



 Score = 38.1 bits (87), Expect(2) = 4e-08
 Identities = 32/73 (43%), Positives = 37/73 (50%), Gaps = 22/73 (30%)
 Frame = +3

Query: 240 FDAQRSDKVLVETNRPDTLDAA-------DTSWTFKIP-------------QVTNCE-DI 356
           FDA+ + KVL+ TNRPDTLD A       D    F +P             +V N E DI
Sbjct: 307 FDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFSLPDLEGRTQIFMIHARVMNMERDI 366

Query: 357 -IELLARLFPNFT 392
             ELLARL PN T
Sbjct: 367 RFELLARLCPNCT 379