BLASTX nr result

ID: Coptis24_contig00019409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019409
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298449.1| predicted protein [Populus trichocarpa] gi|2...   253   2e-65
ref|XP_002323292.1| predicted protein [Populus trichocarpa] gi|2...   247   1e-63
ref|XP_002330999.1| predicted protein [Populus trichocarpa] gi|2...   245   4e-63
ref|XP_002277970.2| PREDICTED: multiple C2 and transmembrane dom...   245   5e-63
ref|XP_003563626.1| PREDICTED: uncharacterized protein LOC100829...   245   5e-63

>ref|XP_002298449.1| predicted protein [Populus trichocarpa] gi|222845707|gb|EEE83254.1|
            predicted protein [Populus trichocarpa]
          Length = 1051

 Score =  253 bits (647), Expect = 2e-65
 Identities = 118/139 (84%), Positives = 129/139 (92%)
 Frame = -2

Query: 622  FRPRHPPHMDTRLSWAEAVHPDELDEEFDTFPTSRQHDLVRLRYDRLRSVAGRIQTVVGD 443
            FRPRHPPHMDT+LSWAEAVHPDELDEEFDTFPTS+ HD+VR+RYDRLR VAGRIQTVVGD
Sbjct: 913  FRPRHPPHMDTKLSWAEAVHPDELDEEFDTFPTSKSHDIVRMRYDRLRGVAGRIQTVVGD 972

Query: 442  MATQGERFQSLLSWRDPRATSLYIVFCLVASIVLYVTPFRVLTLAIGLYMLRHPRFRSKL 263
            +ATQGERFQSLLSWRDPRATSL+IVFCL A++VLYVTPFRV+ L  GLY LRHPRFRSKL
Sbjct: 973  IATQGERFQSLLSWRDPRATSLFIVFCLCAAVVLYVTPFRVVALVAGLYYLRHPRFRSKL 1032

Query: 262  PSVSSNFFKRLPARVDGMI 206
            PSV SNFFKRLPAR D ++
Sbjct: 1033 PSVPSNFFKRLPARTDSLL 1051


>ref|XP_002323292.1| predicted protein [Populus trichocarpa] gi|222867922|gb|EEF05053.1|
           predicted protein [Populus trichocarpa]
          Length = 671

 Score =  247 bits (631), Expect = 1e-63
 Identities = 112/139 (80%), Positives = 129/139 (92%)
 Frame = -2

Query: 622 FRPRHPPHMDTRLSWAEAVHPDELDEEFDTFPTSRQHDLVRLRYDRLRSVAGRIQTVVGD 443
           FR RHPPHMDT+LSWAEAVHPDELDEEFDTFPTS+Q D+ R+RYDRLRSVAGRIQTVVGD
Sbjct: 533 FRARHPPHMDTKLSWAEAVHPDELDEEFDTFPTSKQQDVARMRYDRLRSVAGRIQTVVGD 592

Query: 442 MATQGERFQSLLSWRDPRATSLYIVFCLVASIVLYVTPFRVLTLAIGLYMLRHPRFRSKL 263
           MATQGERFQ+LLSWRDPRATSLYI+FCL+A++VLY+TPF+++TL  GL+ LRHPRFRSK 
Sbjct: 593 MATQGERFQALLSWRDPRATSLYIIFCLIAAVVLYITPFKIITLGTGLFWLRHPRFRSKQ 652

Query: 262 PSVSSNFFKRLPARVDGMI 206
           PSV SNFF+RLP+R D M+
Sbjct: 653 PSVPSNFFRRLPSRADSML 671


>ref|XP_002330999.1| predicted protein [Populus trichocarpa] gi|222872929|gb|EEF10060.1|
            predicted protein [Populus trichocarpa]
          Length = 796

 Score =  245 bits (626), Expect = 4e-63
 Identities = 110/138 (79%), Positives = 129/138 (93%)
 Frame = -2

Query: 619  RPRHPPHMDTRLSWAEAVHPDELDEEFDTFPTSRQHDLVRLRYDRLRSVAGRIQTVVGDM 440
            RPRHPPHMDT+LSWAEAVHPDELDEEFDTFPTS+Q D+ R+RYDRLRSVAGRIQTV+GDM
Sbjct: 659  RPRHPPHMDTKLSWAEAVHPDELDEEFDTFPTSKQQDVARMRYDRLRSVAGRIQTVMGDM 718

Query: 439  ATQGERFQSLLSWRDPRATSLYIVFCLVASIVLYVTPFRVLTLAIGLYMLRHPRFRSKLP 260
            ATQGERFQ+LLSWRDPRATSL+++FCL+A++VLYVTPF+++TL  GL+ LRHPRFRSK P
Sbjct: 719  ATQGERFQALLSWRDPRATSLFVIFCLIAAVVLYVTPFKIITLVTGLFWLRHPRFRSKQP 778

Query: 259  SVSSNFFKRLPARVDGMI 206
            SV SNFF+RLP+R D M+
Sbjct: 779  SVPSNFFRRLPSRADSML 796


>ref|XP_002277970.2| PREDICTED: multiple C2 and transmembrane domain-containing protein
            2-like [Vitis vinifera]
          Length = 794

 Score =  245 bits (625), Expect = 5e-63
 Identities = 114/139 (82%), Positives = 127/139 (91%)
 Frame = -2

Query: 622  FRPRHPPHMDTRLSWAEAVHPDELDEEFDTFPTSRQHDLVRLRYDRLRSVAGRIQTVVGD 443
            FRPRHPPHMDT+LSWAEAVH DELDEEFDTFPTS+  D+V +RYDRLRSVAGRIQTVVGD
Sbjct: 656  FRPRHPPHMDTKLSWAEAVHRDELDEEFDTFPTSKPQDVVMMRYDRLRSVAGRIQTVVGD 715

Query: 442  MATQGERFQSLLSWRDPRATSLYIVFCLVASIVLYVTPFRVLTLAIGLYMLRHPRFRSKL 263
            MATQGERFQSLLSWRDPRATSLYIVFCL+A++VLYVTPF++L L  GL+ LRHPRFRSK+
Sbjct: 716  MATQGERFQSLLSWRDPRATSLYIVFCLIAAVVLYVTPFKILALVAGLFWLRHPRFRSKM 775

Query: 262  PSVSSNFFKRLPARVDGMI 206
            PS  SNFF+RLPAR D M+
Sbjct: 776  PSAPSNFFRRLPARSDSML 794


>ref|XP_003563626.1| PREDICTED: uncharacterized protein LOC100829273 [Brachypodium
            distachyon]
          Length = 812

 Score =  245 bits (625), Expect = 5e-63
 Identities = 113/138 (81%), Positives = 127/138 (92%)
 Frame = -2

Query: 619  RPRHPPHMDTRLSWAEAVHPDELDEEFDTFPTSRQHDLVRLRYDRLRSVAGRIQTVVGDM 440
            RPRHPPHMDT++SWAEAVHPDELDEEFDTFPTSRQ D+V +RYDRLRSVAGRIQTVVGDM
Sbjct: 675  RPRHPPHMDTKMSWAEAVHPDELDEEFDTFPTSRQQDVVYMRYDRLRSVAGRIQTVVGDM 734

Query: 439  ATQGERFQSLLSWRDPRATSLYIVFCLVASIVLYVTPFRVLTLAIGLYMLRHPRFRSKLP 260
            ATQGER QSLL WRDPRAT L++VFCL+A++VLYVTPFRV+ L  GLY+LRHPRFRSKLP
Sbjct: 735  ATQGERLQSLLGWRDPRATCLFVVFCLLAAVVLYVTPFRVVALVAGLYLLRHPRFRSKLP 794

Query: 259  SVSSNFFKRLPARVDGMI 206
            SV SNFF+RLP+R D M+
Sbjct: 795  SVPSNFFRRLPSRADSML 812


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