BLASTX nr result
ID: Coptis24_contig00019385
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019385 (628 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [... 86 6e-15 dbj|BAJ84910.1| predicted protein [Hordeum vulgare subsp. vulgare] 85 1e-14 ref|XP_002466720.1| hypothetical protein SORBIDRAFT_01g012820 [S... 79 5e-13 emb|CAN72696.1| hypothetical protein VITISV_019040 [Vitis vinifera] 79 5e-13 ref|XP_003561571.1| PREDICTED: pre-rRNA-processing protein TSR2-... 79 9e-13 >ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [Ricinus communis] gi|223548223|gb|EEF49714.1| Pre-rRNA-processing protein TSR2, putative [Ricinus communis] Length = 213 Score = 85.9 bits (211), Expect = 6e-15 Identities = 47/120 (39%), Positives = 73/120 (60%) Frame = +1 Query: 97 SSNGSLPQKLKPEYLPLLSEAIYRIINEQWSGTVMALQTGWGGEFFLQKLNLFASEILSF 276 + NGSL ++L PE +PL E I+ I++ +WS +A++ WGG Q + +I S+ Sbjct: 10 NQNGSLTKQLPPESVPLFQEGIFLILS-RWSALQLAVENEWGGRGSRQLADQIGFDIFSW 68 Query: 277 FTHSKGPFYVDELADFLDDFAWDCLKLDLKDESPEQVAKVLIAMHEELLRDDLKSIEKLR 456 FT SK P Y+D+L + LD+ L ++D S E+VA+ L+ MHEE L + +IE+LR Sbjct: 69 FTQSKEPLYIDDLENILDE-GMISLNTMIEDGSVEEVAEKLMIMHEECLEGNYHTIEQLR 127 >dbj|BAJ84910.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 191 Score = 84.7 bits (208), Expect = 1e-14 Identities = 43/112 (38%), Positives = 67/112 (59%) Frame = +1 Query: 124 LKPEYLPLLSEAIYRIINEQWSGTVMALQTGWGGEFFLQKLNLFASEILSFFTHSKGPFY 303 L P+ L E I + +W+ MA++ GWGG K + A+++LSFFT SKGP+Y Sbjct: 11 LSPQAAAALQEGIGLVFG-RWTALQMAVENGWGGRESRAKADRLAADVLSFFTGSKGPYY 69 Query: 304 VDELADFLDDFAWDCLKLDLKDESPEQVAKVLIAMHEELLRDDLKSIEKLRN 459 D+L + + D + D +D S +VA+ ++ MHEE L+++ SI+KLRN Sbjct: 70 YDDLEEMMFDSISEFFNADFEDGSVGEVAEQVLIMHEECLQNNYSSIDKLRN 121 >ref|XP_002466720.1| hypothetical protein SORBIDRAFT_01g012820 [Sorghum bicolor] gi|241920574|gb|EER93718.1| hypothetical protein SORBIDRAFT_01g012820 [Sorghum bicolor] Length = 200 Score = 79.3 bits (194), Expect = 5e-13 Identities = 43/118 (36%), Positives = 65/118 (55%) Frame = +1 Query: 106 GSLPQKLKPEYLPLLSEAIYRIINEQWSGTVMALQTGWGGEFFLQKLNLFASEILSFFTH 285 G P + E EAI R++ +W+ MA++ WGG K + F IL +F Sbjct: 10 GPGPGPISAEAEAAFGEAI-RLVFGRWTALQMAVENQWGGRDSRSKADQFGESILFWFCR 68 Query: 286 SKGPFYVDELADFLDDFAWDCLKLDLKDESPEQVAKVLIAMHEELLRDDLKSIEKLRN 459 +KGP Y ++L D + D + D +D S E+VA+ L+ +HEE L+++ SIEKLRN Sbjct: 69 TKGPHYFEDLVDMMYDTISESFNSDFEDNSVEEVAEQLLIIHEECLQNNYSSIEKLRN 126 >emb|CAN72696.1| hypothetical protein VITISV_019040 [Vitis vinifera] Length = 421 Score = 79.3 bits (194), Expect = 5e-13 Identities = 47/118 (39%), Positives = 69/118 (58%) Frame = +1 Query: 103 NGSLPQKLKPEYLPLLSEAIYRIINEQWSGTVMALQTGWGGEFFLQKLNLFASEILSFFT 282 +G + +L E L + I +++ QWS MA+Q WGG Q + A +I S+FT Sbjct: 3 SGGVAPQLSEEATHHLQQGIVMLLS-QWSALQMAVQXEWGGRQSSQLADQLALDIFSWFT 61 Query: 283 HSKGPFYVDELADFLDDFAWDCLKLDLKDESPEQVAKVLIAMHEELLRDDLKSIEKLR 456 HS+ P Y+D+L + LD+ A L +D S E+VA+ L+ MHEE L + +SIEKLR Sbjct: 62 HSREPLYIDDLENILDE-AMLSLNTMTEDGSIEEVAEKLMTMHEECLEGNYQSIEKLR 118 >ref|XP_003561571.1| PREDICTED: pre-rRNA-processing protein TSR2-like [Brachypodium distachyon] Length = 192 Score = 78.6 bits (192), Expect = 9e-13 Identities = 43/112 (38%), Positives = 64/112 (57%) Frame = +1 Query: 124 LKPEYLPLLSEAIYRIINEQWSGTVMALQTGWGGEFFLQKLNLFASEILSFFTHSKGPFY 303 L P+ L E I R++ +W+ MA++ WGG K + A ILS+F +SKGP+Y Sbjct: 11 LSPQATAALQEGI-RLVFGRWTALQMAVENQWGGRDSRAKADQLAESILSWFCNSKGPYY 69 Query: 304 VDELADFLDDFAWDCLKLDLKDESPEQVAKVLIAMHEELLRDDLKSIEKLRN 459 D+L + + D D +D S E+VA+ ++ MHE L+ + SIEKLRN Sbjct: 70 YDDLENMIYVAISDSFSSDFEDGSIEEVAEQILIMHEGCLQGNYSSIEKLRN 121