BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019385
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [...    86   6e-15
dbj|BAJ84910.1| predicted protein [Hordeum vulgare subsp. vulgare]     85   1e-14
ref|XP_002466720.1| hypothetical protein SORBIDRAFT_01g012820 [S...    79   5e-13
emb|CAN72696.1| hypothetical protein VITISV_019040 [Vitis vinifera]    79   5e-13
ref|XP_003561571.1| PREDICTED: pre-rRNA-processing protein TSR2-...    79   9e-13

>ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [Ricinus communis]
           gi|223548223|gb|EEF49714.1| Pre-rRNA-processing protein
           TSR2, putative [Ricinus communis]
          Length = 213

 Score = 85.9 bits (211), Expect = 6e-15
 Identities = 47/120 (39%), Positives = 73/120 (60%)
 Frame = +1

Query: 97  SSNGSLPQKLKPEYLPLLSEAIYRIINEQWSGTVMALQTGWGGEFFLQKLNLFASEILSF 276
           + NGSL ++L PE +PL  E I+ I++ +WS   +A++  WGG    Q  +    +I S+
Sbjct: 10  NQNGSLTKQLPPESVPLFQEGIFLILS-RWSALQLAVENEWGGRGSRQLADQIGFDIFSW 68

Query: 277 FTHSKGPFYVDELADFLDDFAWDCLKLDLKDESPEQVAKVLIAMHEELLRDDLKSIEKLR 456
           FT SK P Y+D+L + LD+     L   ++D S E+VA+ L+ MHEE L  +  +IE+LR
Sbjct: 69  FTQSKEPLYIDDLENILDE-GMISLNTMIEDGSVEEVAEKLMIMHEECLEGNYHTIEQLR 127


>dbj|BAJ84910.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 191

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 43/112 (38%), Positives = 67/112 (59%)
 Frame = +1

Query: 124 LKPEYLPLLSEAIYRIINEQWSGTVMALQTGWGGEFFLQKLNLFASEILSFFTHSKGPFY 303
           L P+    L E I  +   +W+   MA++ GWGG     K +  A+++LSFFT SKGP+Y
Sbjct: 11  LSPQAAAALQEGIGLVFG-RWTALQMAVENGWGGRESRAKADRLAADVLSFFTGSKGPYY 69

Query: 304 VDELADFLDDFAWDCLKLDLKDESPEQVAKVLIAMHEELLRDDLKSIEKLRN 459
            D+L + + D   +    D +D S  +VA+ ++ MHEE L+++  SI+KLRN
Sbjct: 70  YDDLEEMMFDSISEFFNADFEDGSVGEVAEQVLIMHEECLQNNYSSIDKLRN 121


>ref|XP_002466720.1| hypothetical protein SORBIDRAFT_01g012820 [Sorghum bicolor]
           gi|241920574|gb|EER93718.1| hypothetical protein
           SORBIDRAFT_01g012820 [Sorghum bicolor]
          Length = 200

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 43/118 (36%), Positives = 65/118 (55%)
 Frame = +1

Query: 106 GSLPQKLKPEYLPLLSEAIYRIINEQWSGTVMALQTGWGGEFFLQKLNLFASEILSFFTH 285
           G  P  +  E      EAI R++  +W+   MA++  WGG     K + F   IL +F  
Sbjct: 10  GPGPGPISAEAEAAFGEAI-RLVFGRWTALQMAVENQWGGRDSRSKADQFGESILFWFCR 68

Query: 286 SKGPFYVDELADFLDDFAWDCLKLDLKDESPEQVAKVLIAMHEELLRDDLKSIEKLRN 459
           +KGP Y ++L D + D   +    D +D S E+VA+ L+ +HEE L+++  SIEKLRN
Sbjct: 69  TKGPHYFEDLVDMMYDTISESFNSDFEDNSVEEVAEQLLIIHEECLQNNYSSIEKLRN 126


>emb|CAN72696.1| hypothetical protein VITISV_019040 [Vitis vinifera]
          Length = 421

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 47/118 (39%), Positives = 69/118 (58%)
 Frame = +1

Query: 103 NGSLPQKLKPEYLPLLSEAIYRIINEQWSGTVMALQTGWGGEFFLQKLNLFASEILSFFT 282
           +G +  +L  E    L + I  +++ QWS   MA+Q  WGG    Q  +  A +I S+FT
Sbjct: 3   SGGVAPQLSEEATHHLQQGIVMLLS-QWSALQMAVQXEWGGRQSSQLADQLALDIFSWFT 61

Query: 283 HSKGPFYVDELADFLDDFAWDCLKLDLKDESPEQVAKVLIAMHEELLRDDLKSIEKLR 456
           HS+ P Y+D+L + LD+ A   L    +D S E+VA+ L+ MHEE L  + +SIEKLR
Sbjct: 62  HSREPLYIDDLENILDE-AMLSLNTMTEDGSIEEVAEKLMTMHEECLEGNYQSIEKLR 118


>ref|XP_003561571.1| PREDICTED: pre-rRNA-processing protein TSR2-like [Brachypodium
           distachyon]
          Length = 192

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 43/112 (38%), Positives = 64/112 (57%)
 Frame = +1

Query: 124 LKPEYLPLLSEAIYRIINEQWSGTVMALQTGWGGEFFLQKLNLFASEILSFFTHSKGPFY 303
           L P+    L E I R++  +W+   MA++  WGG     K +  A  ILS+F +SKGP+Y
Sbjct: 11  LSPQATAALQEGI-RLVFGRWTALQMAVENQWGGRDSRAKADQLAESILSWFCNSKGPYY 69

Query: 304 VDELADFLDDFAWDCLKLDLKDESPEQVAKVLIAMHEELLRDDLKSIEKLRN 459
            D+L + +     D    D +D S E+VA+ ++ MHE  L+ +  SIEKLRN
Sbjct: 70  YDDLENMIYVAISDSFSSDFEDGSIEEVAEQILIMHEGCLQGNYSSIEKLRN 121