BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019367
         (1512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group...   210   e-117
gb|ABA94321.1| retrotransposon protein, putative, unclassified [...   208   e-115
emb|CAN69597.1| hypothetical protein VITISV_038518 [Vitis vinifera]   200   e-114
gb|AAT38747.2| Polyprotein, putative [Solanum demissum]               202   e-113
emb|CAN60930.1| hypothetical protein VITISV_012765 [Vitis vinifera]   207   e-113

>gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108711651|gb|ABF99446.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1393

 Score =  210 bits (534), Expect(3) = e-117
 Identities = 113/193 (58%), Positives = 135/193 (69%), Gaps = 1/193 (0%)
 Frame = -3

Query: 769  LSEEVSMRLPPGLKLAGSDNCVCKLKKSLYGLKQSPRAWFERFSEVVKKASYSQSQADHT 590
            L EEV M +PPG   + +   VCKLKKSLYGLKQSPRAWF+RF   V    YSQ   DHT
Sbjct: 1002 LHEEVYMEIPPGFGNSQTVGKVCKLKKSLYGLKQSPRAWFDRFRHAVCDMGYSQCNGDHT 1061

Query: 589  LFVRRP*SNITALIVYVDDIVVTGNDPSEITKLKTFLSSHFETKDLGQLKYFLGIEVVRS 410
            +F +   ++IT L VYVDDIV+TG+D  EI  LK  L   FE KDLG L+YFLGIE+ RS
Sbjct: 1062 VFYKHRGTHITILAVYVDDIVITGDDVEEIRCLKERLGKAFEVKDLGPLRYFLGIEIARS 1121

Query: 409  QQGIFISQRKYVLDLLSETE*T-C*IADTPIDQNHRLNHIDGDPIQDTEMFQ*LVGRQIY 233
             +GI +SQRKYVLDLL++T    C  + TPID+NH+L    GDP+ D E +Q LVGR IY
Sbjct: 1122 SKGIVLSQRKYVLDLLTDTGMLGCRASTTPIDRNHQLCAQSGDPV-DKEAYQRLVGRLIY 1180

Query: 232  LSHTRPDIAYVVS 194
            L HTRPDI+Y VS
Sbjct: 1181 LCHTRPDISYAVS 1193



 Score =  196 bits (497), Expect(3) = e-117
 Identities = 108/237 (45%), Positives = 145/237 (61%), Gaps = 14/237 (5%)
 Frame = -2

Query: 1439 VYKRR------EKKKQVTDPTIQRHPTNPQILIQVLF*IYCPPI-LTQVMFVSND----- 1296
            VY+RR      EK+K +    I+  P +P+  +        PP  L  +  + N      
Sbjct: 766  VYQRRRFDSQGEKRKGLVQSQIEELP-HPKCPVPESSQSLSPPASLASLETIGNTSPTLE 824

Query: 1295 -VSIDVVPTNHVPSDMDNRPVAV-CKGLRTKHPIDRFISYKALSPKYKSFVGAMSSISIP 1122
             V + +V      S+    P+ +  + L   H I  +I+Y  +SP YK+F+ ++ ++ IP
Sbjct: 825  HVELPLVQRRETRSNAGRPPIRLGFEHLSFMHDIANYITYSHVSPAYKTFIASLQTMPIP 884

Query: 1121 SSVADALSQPQWRKAMMEEMHALEKNKTWDLVPLPKGKKLVGCKWVFTVKYNPDGSVNKY 942
                 A   P+W+ AM EE++AL KNKTW+LV LP  K+ VGCKWVFTVK  P+G V++Y
Sbjct: 885  KDWKCAKQDPKWKDAMKEELNALVKNKTWELVKLPPEKRAVGCKWVFTVKQTPEGKVDRY 944

Query: 941  KARLVARGFTQTYGIDYLETFAPVAKMKTVRVLLSLAANMSWPLHQLDVNNAFLHGD 771
            KARLVA+G++QTYGIDY ETFAPVAKM TVR L+S A N  WPLHQLDV NAFLHGD
Sbjct: 945  KARLVAKGYSQTYGIDYDETFAPVAKMGTVRALVSCAVNFGWPLHQLDVKNAFLHGD 1001



 Score = 64.7 bits (156), Expect(3) = e-117
 Identities = 26/52 (50%), Positives = 37/52 (71%)
 Frame = -1

Query: 189  VSAISQFMHSP*TPHLEAAQRMLRYLKGSPSRGIQYKKTKHF*VEAYSDADW 34
            VS +S++MH P T HL+   ++LRYLKG+P +G+ ++K  H  VE Y DADW
Sbjct: 1192 VSVVSRYMHDPRTGHLDVVHKILRYLKGTPGKGLWFRKNGHLNVEGYCDADW 1243


>gb|ABA94321.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1133

 Score =  208 bits (529), Expect(3) = e-115
 Identities = 112/193 (58%), Positives = 134/193 (69%), Gaps = 1/193 (0%)
 Frame = -3

Query: 769  LSEEVSMRLPPGLKLAGSDNCVCKLKKSLYGLKQSPRAWFERFSEVVKKASYSQSQADHT 590
            L EEV M +PPG   + +   VCKLKKSLYGLKQSPRAWF+RF   V    YSQ   DHT
Sbjct: 861  LHEEVYMEIPPGFGNSQTVGKVCKLKKSLYGLKQSPRAWFDRFRHAVCDMGYSQCNGDHT 920

Query: 589  LFVRRP*SNITALIVYVDDIVVTGNDPSEITKLKTFLSSHFETKDLGQLKYFLGIEVVRS 410
            +F +   ++IT L VYVDDIV+TG+D  EI  LK  L   FE KDLG L+YFLGIE+ RS
Sbjct: 921  IFYKHRGTHITILAVYVDDIVITGDDVEEIRCLKERLGKAFEVKDLGPLRYFLGIEIARS 980

Query: 409  QQGIFISQRKYVLDLLSETE*T-C*IADTPIDQNHRLNHIDGDPIQDTEMFQ*LVGRQIY 233
             +GI +SQRKYVLDLL++     C  + TPID+NH+L    GDP+ D E +Q LVGR IY
Sbjct: 981  SKGIVLSQRKYVLDLLTDIGMLGCRASTTPIDRNHQLCAQSGDPV-DKEAYQRLVGRLIY 1039

Query: 232  LSHTRPDIAYVVS 194
            L HTRPDI+Y VS
Sbjct: 1040 LCHTRPDISYAVS 1052



 Score =  193 bits (491), Expect(3) = e-115
 Identities = 106/237 (44%), Positives = 144/237 (60%), Gaps = 14/237 (5%)
 Frame = -2

Query: 1439 VYKRR------EKKKQVTDPTIQRHPTNPQILIQVLF*IYCPPI-LTQVMFVSND----- 1296
            VY+RR      EK+K +    I+  P +P+  +        PP  L  +  + N      
Sbjct: 625  VYQRRRFDSQGEKRKGLVQSQIEELP-HPKCPVSESSQSLSPPASLASLETIGNTSPTLE 683

Query: 1295 -VSIDVVPTNHVPSDMDNRPVAV-CKGLRTKHPIDRFISYKALSPKYKSFVGAMSSISIP 1122
             V + +       S+    P+ +  + L + H I  +I+Y  +SP YK+F+ ++ ++ IP
Sbjct: 684  HVELPLAQRRETRSNASRPPIRLGFEHLSSMHDIANYITYSHVSPAYKTFIASLQTVPIP 743

Query: 1121 SSVADALSQPQWRKAMMEEMHALEKNKTWDLVPLPKGKKLVGCKWVFTVKYNPDGSVNKY 942
                 A   P+W+ AM EE++AL KNKTW+LV LP  K+ VGCKWVFTVK  P+G V++Y
Sbjct: 744  KDWKCAKQDPKWKDAMKEELNALVKNKTWELVKLPPEKRTVGCKWVFTVKQTPEGKVDRY 803

Query: 941  KARLVARGFTQTYGIDYLETFAPVAKMKTVRVLLSLAANMSWPLHQLDVNNAFLHGD 771
            KARLVA+G++QTYGIDY E FAPVAKM TVR L+S A N  WPLHQLDV NAFLHGD
Sbjct: 804  KARLVAKGYSQTYGIDYDEIFAPVAKMGTVRGLVSCAVNFGWPLHQLDVKNAFLHGD 860



 Score = 64.7 bits (156), Expect(3) = e-115
 Identities = 26/52 (50%), Positives = 37/52 (71%)
 Frame = -1

Query: 189  VSAISQFMHSP*TPHLEAAQRMLRYLKGSPSRGIQYKKTKHF*VEAYSDADW 34
            VS +S++MH P T HL+   ++LRYLKG+P +G+ ++K  H  VE Y DADW
Sbjct: 1051 VSVVSRYMHDPRTGHLDVVHKILRYLKGTPGKGLWFRKNGHLNVEGYCDADW 1102


>emb|CAN69597.1| hypothetical protein VITISV_038518 [Vitis vinifera]
          Length = 1893

 Score =  200 bits (509), Expect(3) = e-114
 Identities = 89/164 (54%), Positives = 123/164 (75%), Gaps = 2/164 (1%)
 Frame = -2

Query: 1256 DMDNRPVAVCKGLR--TKHPIDRFISYKALSPKYKSFVGAMSSISIPSSVADALSQPQWR 1083
            D    P+A+ KG+R  T HPI  +++Y+ LSP Y++F  ++    +P+++ +AL   +W+
Sbjct: 1353 DDSTLPIALRKGVRRCTDHPIGNYVTYEGLSPSYRAFATSLDDTQVPNTIQEALKISEWK 1412

Query: 1082 KAMMEEMHALEKNKTWDLVPLPKGKKLVGCKWVFTVKYNPDGSVNKYKARLVARGFTQTY 903
            KA+ +E+ ALEKN TW +  LP GK+ VGCKW+FT+KY  DGSV ++KARLVARGFTQ+Y
Sbjct: 1413 KAVQDEIDALEKNGTWTIXDLPVGKRPVGCKWIFTIKYKADGSVERFKARLVARGFTQSY 1472

Query: 902  GIDYLETFAPVAKMKTVRVLLSLAANMSWPLHQLDVNNAFLHGD 771
            GIDY ETFAP+AK+ T+R+LLSLA N  W L QLD+ NAFL+GD
Sbjct: 1473 GIDYQETFAPIAKLNTIRILLSLAVNQDWCLQQLDIKNAFLNGD 1516



 Score =  193 bits (490), Expect(3) = e-114
 Identities = 102/174 (58%), Positives = 124/174 (71%), Gaps = 2/174 (1%)
 Frame = -3

Query: 706  VCKLKKSLYGLKQSPRAWFERFSEVVKKASYSQSQADHTLFVRRP*SNITA-LIVYVDDI 530
            VCKL+KSLYGLKQSPRAWF+RF++ V K  Y Q QADHTLFV++  +   A LI+YVDDI
Sbjct: 1521 VCKLQKSLYGLKQSPRAWFDRFTKAVLKLGYKQGQADHTLFVKKSHAGKMAILIIYVDDI 1580

Query: 529  VVTGNDPSEITKLKTFLSSHFETKDLGQLKYFLGIEVVRSQQGIFISQRKYVLDLLSETE 350
            +++GND  E+  LK +LS  FE KDLG LKYFLG+EV RS++GI +SQRKY+LDLL ET 
Sbjct: 1581 ILSGNDMEELQNLKKYLSEEFEVKDLGNLKYFLGMEVARSRKGIVVSQRKYILDLLKETG 1640

Query: 349  *T-C*IADTPIDQNHRLNHIDGDPIQDTEMFQ*LVGRQIYLSHTRPDIAYVVSA 191
               C   DTP+D   +L         D   +Q LVGR IYLSHTRPDI + VSA
Sbjct: 1641 MLGCKPIDTPMDSQKKLGIEKESTPVDRGRYQWLVGRLIYLSHTRPDIGFAVSA 1694



 Score = 67.0 bits (162), Expect(3) = e-114
 Identities = 30/52 (57%), Positives = 40/52 (76%)
 Frame = -1

Query: 189  VSAISQFMHSP*TPHLEAAQRMLRYLKGSPSRGIQYKKTKHF*VEAYSDADW 34
            VSA+SQFMHSP   H+EA  R+LRYLK +P +G+ ++KT++   E YSDADW
Sbjct: 1692 VSAVSQFMHSPTXEHMEAVYRILRYLKMTPGKGLFFRKTENRDTEVYSDADW 1743


>gb|AAT38747.2| Polyprotein, putative [Solanum demissum]
          Length = 1402

 Score =  202 bits (514), Expect(3) = e-113
 Identities = 96/177 (54%), Positives = 131/177 (74%), Gaps = 3/177 (1%)
 Frame = -2

Query: 1292 SIDVVPTNHVPSDMDNRPVAVCKGLR---TKHPIDRFISYKALSPKYKSFVGAMSSISIP 1122
            S D +P N  P++  + P+A+ KG R   + + I  FISY  LSP   S + ++ SI +P
Sbjct: 855  SSDPLPVNPSPTENLDIPIALRKGKRQCPSIYSIANFISYDHLSPTSCSLIASLDSIFVP 914

Query: 1121 SSVADALSQPQWRKAMMEEMHALEKNKTWDLVPLPKGKKLVGCKWVFTVKYNPDGSVNKY 942
             +V +AL+ P W  AM++E+HAL+ N TW+LV LPKGKK VGCKWVFT+K NPDGS+ + 
Sbjct: 915  KTVREALNHPGWYDAMLDEIHALDDNHTWNLVDLPKGKKAVGCKWVFTIKVNPDGSMARL 974

Query: 941  KARLVARGFTQTYGIDYLETFAPVAKMKTVRVLLSLAANMSWPLHQLDVNNAFLHGD 771
            KARLVA+G+ QTYG+DY +TF+PVAK+ +VR+ +SLAA+ +WPLHQL + NAFLHGD
Sbjct: 975  KARLVAKGYAQTYGVDYSDTFSPVAKLTSVRLFISLAASQNWPLHQLAIKNAFLHGD 1031



 Score =  202 bits (514), Expect(3) = e-113
 Identities = 108/193 (55%), Positives = 135/193 (69%), Gaps = 1/193 (0%)
 Frame = -3

Query: 769  LSEEVSMRLPPGLKLAGSDNCVCKLKKSLYGLKQSPRAWFERFSEVVKKASYSQSQADHT 590
            L EEV M  PPG    G +  VC LKK LYGLKQSPRAWF +FSEVV+K   ++S  DH+
Sbjct: 1032 LQEEVYMEQPPGFVAQGENGKVCHLKKPLYGLKQSPRAWFGKFSEVVQKFGLTKSNCDHS 1091

Query: 589  LFVRRP*SNITALIVYVDDIVVTGNDPSEITKLKTFLSSHFETKDLGQLKYFLGIEVVRS 410
            +F R+    I  L+VYVDDIV+T +D + I+ LK FL S F TKDLGQLKYFLGIEV RS
Sbjct: 1092 VFYRQSAVGIILLVVYVDDIVITRSDYAGISSLKLFLHSMFHTKDLGQLKYFLGIEVSRS 1151

Query: 409  QQGIFISQRKYVLDLLSET-E*TC*IADTPIDQNHRLNHIDGDPIQDTEMFQ*LVGRQIY 233
            ++GIF+SQRKY+LDLL ET +       TP+  N +L + DGDP  D E ++ LVG+  Y
Sbjct: 1152 KKGIFLSQRKYILDLLEETGKSAAKPCSTPMVPNTQLTNDDGDPFDDPERYRRLVGKLNY 1211

Query: 232  LSHTRPDIAYVVS 194
            L+ TRPDI++ VS
Sbjct: 1212 LTVTRPDISFAVS 1224



 Score = 53.5 bits (127), Expect(3) = e-113
 Identities = 23/52 (44%), Positives = 34/52 (65%)
 Frame = -1

Query: 189  VSAISQFMHSP*TPHLEAAQRMLRYLKGSPSRGIQYKKTKHF*VEAYSDADW 34
            VS +SQFM +P   H  A +++L YLKG+P  GI Y+  +H  +E ++D DW
Sbjct: 1223 VSIVSQFMSTPTIKHWAALEQILCYLKGAPGLGIVYRNNEHTRIECFADVDW 1274


>emb|CAN60930.1| hypothetical protein VITISV_012765 [Vitis vinifera]
          Length = 1201

 Score =  207 bits (526), Expect(3) = e-113
 Identities = 113/195 (57%), Positives = 137/195 (70%), Gaps = 3/195 (1%)
 Frame = -3

Query: 769  LSEEVSMRLPPGLKLAGSDNC--VCKLKKSLYGLKQSPRAWFERFSEVVKKASYSQSQAD 596
            LSEEV M LPPG  +     C  VCKLKKSLYGLKQSPRAWF RF++ ++   Y QS +D
Sbjct: 807  LSEEVYMDLPPGC-MVSEKQCQKVCKLKKSLYGLKQSPRAWFGRFTKSMRAFGYRQSNSD 865

Query: 595  HTLFVRRP*SNITALIVYVDDIVVTGNDPSEITKLKTFLSSHFETKDLGQLKYFLGIEVV 416
            HTLF+++    ITALIVYVDD+VVTGNDP E   L+ +LS  FE KDLG LKYFLGIEV 
Sbjct: 866  HTLFLKKQHGKITALIVYVDDMVVTGNDPEERKALQNYLSREFEMKDLGPLKYFLGIEVS 925

Query: 415  RSQQGIFISQRKYVLDLLSETE*T-C*IADTPIDQNHRLNHIDGDPIQDTEMFQ*LVGRQ 239
            RS +GIF+SQRKY LDLL ET  + C   +TPI++  +L         D   +Q LVGR 
Sbjct: 926  RSSEGIFLSQRKYALDLLQETGMSGCQPVNTPIEEGLKLCVEPNQVSTDKGRYQRLVGRL 985

Query: 238  IYLSHTRPDIAYVVS 194
            +YL+HTRPD+AY +S
Sbjct: 986  MYLAHTRPDLAYALS 1000



 Score =  192 bits (488), Expect(3) = e-113
 Identities = 86/149 (57%), Positives = 115/149 (77%)
 Frame = -2

Query: 1217 RTKHPIDRFISYKALSPKYKSFVGAMSSISIPSSVADALSQPQWRKAMMEEMHALEKNKT 1038
            + K+P+  ++S   LS   KSFV  +S+++IP+SV +AL+  +W+  M EEM +L+KN+T
Sbjct: 658  KVKYPMSNYVSNHRLSESNKSFVNQLSTVAIPNSVQEALADXRWKAXMNEEMKSLQKNET 717

Query: 1037 WDLVPLPKGKKLVGCKWVFTVKYNPDGSVNKYKARLVARGFTQTYGIDYLETFAPVAKMK 858
            W+LV  P GKK VGC+W++TVKY  DG + ++KARLVA+G+TQTYGIDY  TFAPVAK+ 
Sbjct: 718  WELVECPPGKKPVGCRWIYTVKYKADGXIERFKARLVAKGYTQTYGIDYTXTFAPVAKIN 777

Query: 857  TVRVLLSLAANMSWPLHQLDVNNAFLHGD 771
            TVRVLLSLAAN+ WPL Q DV N FLHG+
Sbjct: 778  TVRVLLSLAANLDWPLQQFDVKNXFLHGE 806



 Score = 58.2 bits (139), Expect(3) = e-113
 Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
 Frame = -1

Query: 201  LLVQVSAISQFMHSP*TPHLEAAQRMLRYLKGSPSRGIQY-KKTKHF*VEAYSDADW 34
            L   +S +SQ+MH+P   H+ A  R+LRYLK +P +GI + K   H  +E Y+DADW
Sbjct: 995  LAYALSVVSQYMHNPGEQHMNAVMRILRYLKNAPGKGILFAKNVNHQSIEVYTDADW 1051