BLASTX nr result

ID: Coptis24_contig00019357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019357
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN39971.1| unknown [Picea sitchensis]                             209   2e-52
gb|ABK23779.1| unknown [Picea sitchensis]                             209   2e-52
ref|XP_002509830.1| ubiquitin-conjugating enzyme h, putative [Ri...   208   4e-52
ref|XP_001759393.1| predicted protein [Physcomitrella patens sub...   208   4e-52
ref|XP_002302592.1| predicted protein [Populus trichocarpa] gi|1...   207   9e-52

>gb|ACN39971.1| unknown [Picea sitchensis]
          Length = 183

 Score =  209 bits (531), Expect = 2e-52
 Identities = 94/114 (82%), Positives = 105/114 (92%)
 Frame = +3

Query: 3   EFNGPANSPYSEGVWRVRVELPDAYPYKSPSICFVNRIYHPNIDEMSGSVCLDVIKQTWS 182
           EFNGP +SPY  GVW++RVELPDAYPYKSPSI FVN+I+HPN+DEMSGSVCLDVI QTWS
Sbjct: 35  EFNGPRDSPYQGGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDEMSGSVCLDVINQTWS 94

Query: 183 PMFDLVNIFEVFLPQLLLYPNPSDPLNGEAALLMMRQPEVYEQKVKEHCTKYAK 344
           PMFDLVN+FEVFLPQLLLYPNP+DPLNGEAA LMMR  +VYEQKVKE+C +YAK
Sbjct: 95  PMFDLVNVFEVFLPQLLLYPNPTDPLNGEAAALMMRDRQVYEQKVKEYCARYAK 148


>gb|ABK23779.1| unknown [Picea sitchensis]
          Length = 183

 Score =  209 bits (531), Expect = 2e-52
 Identities = 94/114 (82%), Positives = 105/114 (92%)
 Frame = +3

Query: 3   EFNGPANSPYSEGVWRVRVELPDAYPYKSPSICFVNRIYHPNIDEMSGSVCLDVIKQTWS 182
           EFNGP +SPY  GVW++RVELPDAYPYKSPSI FVN+I+HPN+DEMSGSVCLDVI QTWS
Sbjct: 35  EFNGPRDSPYQGGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDEMSGSVCLDVINQTWS 94

Query: 183 PMFDLVNIFEVFLPQLLLYPNPSDPLNGEAALLMMRQPEVYEQKVKEHCTKYAK 344
           PMFDLVN+FEVFLPQLLLYPNP+DPLNGEAA LMMR  +VYEQKVKE+C +YAK
Sbjct: 95  PMFDLVNVFEVFLPQLLLYPNPTDPLNGEAAALMMRDRQVYEQKVKEYCARYAK 148


>ref|XP_002509830.1| ubiquitin-conjugating enzyme h, putative [Ricinus communis]
           gi|223549729|gb|EEF51217.1| ubiquitin-conjugating enzyme
           h, putative [Ricinus communis]
          Length = 183

 Score =  208 bits (529), Expect = 4e-52
 Identities = 94/114 (82%), Positives = 103/114 (90%)
 Frame = +3

Query: 3   EFNGPANSPYSEGVWRVRVELPDAYPYKSPSICFVNRIYHPNIDEMSGSVCLDVIKQTWS 182
           EFNGP +SPY  G+WR+RVELPDAYPYKSPSI F+N+IYHPN+DEMSGSVCLDVI QTWS
Sbjct: 35  EFNGPKDSPYQGGLWRIRVELPDAYPYKSPSIGFINKIYHPNVDEMSGSVCLDVINQTWS 94

Query: 183 PMFDLVNIFEVFLPQLLLYPNPSDPLNGEAALLMMRQPEVYEQKVKEHCTKYAK 344
           PMFDLVN+FEVFLPQLLLYPNPSDPLNGEAA LMMR    YEQ+VKE+C KYAK
Sbjct: 95  PMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYEQRVKEYCEKYAK 148


>ref|XP_001759393.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162689323|gb|EDQ75695.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 183

 Score =  208 bits (529), Expect = 4e-52
 Identities = 94/115 (81%), Positives = 104/115 (90%)
 Frame = +3

Query: 3   EFNGPANSPYSEGVWRVRVELPDAYPYKSPSICFVNRIYHPNIDEMSGSVCLDVIKQTWS 182
           EF+GP  SPY EG W++RVELPDAYPYKSPSI FVNRI+HPN+DEMSGSVCLDVI QTWS
Sbjct: 35  EFHGPRESPYQEGTWKIRVELPDAYPYKSPSIGFVNRIFHPNVDEMSGSVCLDVINQTWS 94

Query: 183 PMFDLVNIFEVFLPQLLLYPNPSDPLNGEAALLMMRQPEVYEQKVKEHCTKYAKA 347
           PMFDL+N+FEVFLPQLLLYPNP+DPLNGEAA LMMR  E YEQKVKE+C +YAKA
Sbjct: 95  PMFDLINVFEVFLPQLLLYPNPTDPLNGEAAALMMRDREHYEQKVKEYCERYAKA 149


>ref|XP_002302592.1| predicted protein [Populus trichocarpa] gi|118489895|gb|ABK96745.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222844318|gb|EEE81865.1| predicted protein [Populus
           trichocarpa]
          Length = 183

 Score =  207 bits (526), Expect = 9e-52
 Identities = 95/113 (84%), Positives = 101/113 (89%)
 Frame = +3

Query: 6   FNGPANSPYSEGVWRVRVELPDAYPYKSPSICFVNRIYHPNIDEMSGSVCLDVIKQTWSP 185
           FNGP  SPY  GVWR+RVELPDAYPYKSPSI FVN+IYHPN+DEMSGSVCLDVI QTWSP
Sbjct: 36  FNGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSP 95

Query: 186 MFDLVNIFEVFLPQLLLYPNPSDPLNGEAALLMMRQPEVYEQKVKEHCTKYAK 344
           MFDLVN+FEVFLPQLLLYPNPSDPLNGEAA LMMR    YEQ+VKE+C KYAK
Sbjct: 96  MFDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDKPAYEQRVKEYCEKYAK 148


Top