BLASTX nr result

ID: Coptis24_contig00019356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019356
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635223.1| PREDICTED: uncharacterized protein LOC100855...   114   1e-23
emb|CBI38268.3| unnamed protein product [Vitis vinifera]              114   1e-23
ref|XP_002332475.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
gb|AAK84478.1| unknown [Solanum lycopersicum]                         110   9e-23
ref|XP_002514042.1| conserved hypothetical protein [Ricinus comm...   110   1e-22

>ref|XP_003635223.1| PREDICTED: uncharacterized protein LOC100855017 [Vitis vinifera]
          Length = 425

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = +2

Query: 2   AFAYCLLSLIQQTQKFFIETNDSNDTRNMGFQFAGKAVYTAVWVAAVSLFMELLGFSTQK 181
           AFA CL SLIQQ QKFF+ET+DS+DTRNMGFQFAGKAVYTAVWVAAVSLFMELLGFSTQK
Sbjct: 204 AFACCLSSLIQQAQKFFMETSDSSDTRNMGFQFAGKAVYTAVWVAAVSLFMELLGFSTQK 263

Query: 182 W 184
           W
Sbjct: 264 W 264


>emb|CBI38268.3| unnamed protein product [Vitis vinifera]
          Length = 462

 Score =  114 bits (284), Expect = 1e-23
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = +2

Query: 2   AFAYCLLSLIQQTQKFFIETNDSNDTRNMGFQFAGKAVYTAVWVAAVSLFMELLGFSTQK 181
           AFA CL SLIQQ QKFF+ET+DS+DTRNMGFQFAGKAVYTAVWVAAVSLFMELLGFSTQK
Sbjct: 204 AFACCLSSLIQQAQKFFMETSDSSDTRNMGFQFAGKAVYTAVWVAAVSLFMELLGFSTQK 263

Query: 182 W 184
           W
Sbjct: 264 W 264


>ref|XP_002332475.1| predicted protein [Populus trichocarpa] gi|222832558|gb|EEE71035.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/61 (86%), Positives = 56/61 (91%)
 Frame = +2

Query: 2   AFAYCLLSLIQQTQKFFIETNDSNDTRNMGFQFAGKAVYTAVWVAAVSLFMELLGFSTQK 181
           AFAYCL SLIQQ QKFF ETNDS+D RNMGF FAGKAVY+AVW+AAVSLFMELLGFSTQK
Sbjct: 50  AFAYCLSSLIQQAQKFFTETNDSSDARNMGFSFAGKAVYSAVWIAAVSLFMELLGFSTQK 109

Query: 182 W 184
           W
Sbjct: 110 W 110


>gb|AAK84478.1| unknown [Solanum lycopersicum]
          Length = 621

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/61 (83%), Positives = 57/61 (93%)
 Frame = +2

Query: 2   AFAYCLLSLIQQTQKFFIETNDSNDTRNMGFQFAGKAVYTAVWVAAVSLFMELLGFSTQK 181
           A AYCL S+IQQ QKFF+ET+D+NDTRNMGFQFAG+A+YTAVWVAA SLFMELLGFSTQK
Sbjct: 186 ASAYCLSSVIQQAQKFFMETSDANDTRNMGFQFAGRAIYTAVWVAAASLFMELLGFSTQK 245

Query: 182 W 184
           W
Sbjct: 246 W 246


>ref|XP_002514042.1| conserved hypothetical protein [Ricinus communis]
           gi|223547128|gb|EEF48625.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 705

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/61 (85%), Positives = 55/61 (90%)
 Frame = +2

Query: 2   AFAYCLLSLIQQTQKFFIETNDSNDTRNMGFQFAGKAVYTAVWVAAVSLFMELLGFSTQK 181
           AFAYCL SLIQQ QKFF E NDS+D RNMGF FAGKAVY+AVW+AAVSLFMELLGFSTQK
Sbjct: 206 AFAYCLSSLIQQAQKFFTEMNDSSDARNMGFSFAGKAVYSAVWIAAVSLFMELLGFSTQK 265

Query: 182 W 184
           W
Sbjct: 266 W 266


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