BLASTX nr result

ID: Coptis24_contig00019354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019354
         (757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270564.1| PREDICTED: multidrug and toxin extrusion pro...   187   2e-45
emb|CAN68577.1| hypothetical protein VITISV_019282 [Vitis vinifera]   186   6e-45
ref|XP_003528633.1| PREDICTED: multidrug and toxin extrusion pro...   181   2e-43
ref|XP_002516950.1| multidrug resistance pump, putative [Ricinus...   179   6e-43
ref|XP_003550540.1| PREDICTED: multidrug and toxin extrusion pro...   178   1e-42

>ref|XP_002270564.1| PREDICTED: multidrug and toxin extrusion protein 1 [Vitis vinifera]
           gi|296083343|emb|CBI22979.3| unnamed protein product
           [Vitis vinifera]
          Length = 500

 Score =  187 bits (476), Expect = 2e-45
 Identities = 97/143 (67%), Positives = 109/143 (76%), Gaps = 5/143 (3%)
 Frame = +3

Query: 3   WGRIFTQDVEVLGLTMAVLPIIGLCELGNCPQTAGCGVLRGSARPSIGATINLYSFYLVG 182
           WGR+FTQD +VL LTM VLPIIG+CEL NCPQT  CGVLRGSARP +GA IN YSFYLVG
Sbjct: 357 WGRVFTQDSDVLQLTMTVLPIIGVCELANCPQTTSCGVLRGSARPGVGAGINFYSFYLVG 416

Query: 183 TPVAIVLAFFSDFGFVGLCYGLLAAQTACALSIVTVVCKTDWGRESLKARDMVGRG-AYA 359
           TPVAIVLAF    GFVG CYGLLAAQ AC +SI+ V+ +TDW RESLKA+D+VGR   YA
Sbjct: 417 TPVAIVLAFVWKLGFVGFCYGLLAAQIACLVSILIVIYRTDWERESLKAKDLVGRSTVYA 476

Query: 360 H-ERQTTKSDDE---FLKEEVFE 416
           H +R      DE   FLKE+  E
Sbjct: 477 HADRAEALKFDEGVGFLKEKDIE 499


>emb|CAN68577.1| hypothetical protein VITISV_019282 [Vitis vinifera]
          Length = 536

 Score =  186 bits (471), Expect = 6e-45
 Identities = 101/166 (60%), Positives = 113/166 (68%), Gaps = 1/166 (0%)
 Frame = +3

Query: 3   WGRIFTQDVEVLGLTMAVLPIIGLCELGNCPQTAGCGVLRGSARPSIGATINLYSFYLVG 182
           WGR+FTQD +VL LTM VLPIIG+CEL NCPQT  CGVLRGSARP +GA IN YSFYLVG
Sbjct: 357 WGRVFTQDSDVLQLTMTVLPIIGVCELANCPQTTSCGVLRGSARPGVGAGINFYSFYLVG 416

Query: 183 TPVAIVLAFFSDFGFVGLCYGLLAAQTACALSIVTVVCKTDWGRESLKARDMVGRG-AYA 359
           TPVAIVLAF    GFVG CYGLLAAQ AC +SI+ V+ +TDW RESLKA+D+VGR   YA
Sbjct: 417 TPVAIVLAFVWKLGFVGFCYGLLAAQIACLVSILIVIYRTDWERESLKAKDLVGRSTVYA 476

Query: 360 HERQTTKSDDEFLKEEVFET*MRRIQTKRVSSID*AESTVHTHTCY 497
           H  +      E LK   F    R  Q KR   +D       TH  Y
Sbjct: 477 HADRA-----EALK---FARRSRVSQRKRYRKVDADFVEGTTHAAY 514


>ref|XP_003528633.1| PREDICTED: multidrug and toxin extrusion protein 1-like [Glycine
           max]
          Length = 506

 Score =  181 bits (458), Expect = 2e-43
 Identities = 90/127 (70%), Positives = 99/127 (77%), Gaps = 3/127 (2%)
 Frame = +3

Query: 3   WGRIFTQDVEVLGLTMAVLPIIGLCELGNCPQTAGCGVLRGSARPSIGATINLYSFYLVG 182
           WGR+FT D EVL LTMAVLPIIGLCEL NCPQT  CG+LRGSARP +GA IN  SFYLVG
Sbjct: 365 WGRVFTSDSEVLQLTMAVLPIIGLCELANCPQTTSCGILRGSARPGVGAVINFCSFYLVG 424

Query: 183 TPVAIVLAFFSDFGFVGLCYGLLAAQTACALSIVTVVCKTDWGRESLKARDMVGR---GA 353
            PVAIVLAF+   G VGLCYGLLAAQ AC +SI  VV KTDW RESLKA  +VG+   G 
Sbjct: 425 APVAIVLAFYWKLGMVGLCYGLLAAQIACVVSIFVVVYKTDWERESLKATCLVGKSSCGT 484

Query: 354 YAHERQT 374
           +A+E QT
Sbjct: 485 FAYEDQT 491


>ref|XP_002516950.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223544038|gb|EEF45564.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 503

 Score =  179 bits (454), Expect = 6e-43
 Identities = 88/130 (67%), Positives = 100/130 (76%), Gaps = 1/130 (0%)
 Frame = +3

Query: 3   WGRIFTQDVEVLGLTMAVLPIIGLCELGNCPQTAGCGVLRGSARPSIGATINLYSFYLVG 182
           WGR+FT D EVL LT+ VLPIIGLCEL NCPQT  CG+LRGSARP IGA IN YSFYLVG
Sbjct: 359 WGRVFTGDDEVLELTVIVLPIIGLCELANCPQTTSCGILRGSARPGIGAAINFYSFYLVG 418

Query: 183 TPVAIVLAFFSDFGFVGLCYGLLAAQTACALSIVTVVCKTDWGRESLKARDMVGRG-AYA 359
            PVA+VLAF    GFVGLCYGLLAAQ AC +SI+T V KT+W RES KA+D+VG+    A
Sbjct: 419 APVAVVLAFVWRLGFVGLCYGLLAAQIACVVSILTAVYKTNWERESSKAKDLVGKNDTLA 478

Query: 360 HERQTTKSDD 389
           H   T K ++
Sbjct: 479 HADPTVKCEE 488


>ref|XP_003550540.1| PREDICTED: multidrug and toxin extrusion protein 1-like [Glycine
           max]
          Length = 507

 Score =  178 bits (452), Expect = 1e-42
 Identities = 89/128 (69%), Positives = 99/128 (77%), Gaps = 3/128 (2%)
 Frame = +3

Query: 3   WGRIFTQDVEVLGLTMAVLPIIGLCELGNCPQTAGCGVLRGSARPSIGATINLYSFYLVG 182
           WGR+FT D EVL LT+AVLPIIGLCEL NCPQT  CG+LRGSARP IGA IN  SFYLVG
Sbjct: 364 WGRVFTSDSEVLQLTVAVLPIIGLCELANCPQTTSCGILRGSARPGIGAVINFCSFYLVG 423

Query: 183 TPVAIVLAFFSDFGFVGLCYGLLAAQTACALSIVTVVCKTDWGRESLKARDMVGR---GA 353
            PVAIVLAF+   G VGLCYGLLAAQ AC +SI  VV KTDW RESLKAR +VG+   G 
Sbjct: 424 APVAIVLAFYWKLGMVGLCYGLLAAQIACVVSIFGVVYKTDWERESLKARCLVGKASCGT 483

Query: 354 YAHERQTT 377
           +A++   T
Sbjct: 484 FAYDEDQT 491


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