BLASTX nr result

ID: Coptis24_contig00019351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019351
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326732.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08

>ref|XP_002326732.1| predicted protein [Populus trichocarpa] gi|222834054|gb|EEE72531.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 2/130 (1%)
 Frame = -2

Query: 472 IRERVTSSSASGVQQEMEEE--MKQNDQLELTNQEETTDLTEITFEYRETPFLEQEQLIE 299
           + E+V +      +Q  EEE  + QN   E+ N+EE  D  E+          E+ Q+ +
Sbjct: 1   MEEKVAAEQVHKQEQINEEESDVVQNYVREVENKEEKADGIEV----------EKPQIPK 50

Query: 298 ETKEARKDNKGESNFEDQHAESGKVEETEKTNEGLSKKPKTIPKQKHTLTPTILQPFSLA 119
           E KE + ++K E+  +D      K     + +  ++KKPK  PKQ   +  T+ QPFSLA
Sbjct: 51  EIKEEKNESKAETAIDDNKQSQAKKVGVNQAD--IAKKPKQAPKQIPKMKITVPQPFSLA 108

Query: 118 TEKRMVRDRQ 89
           T+KRM R+R+
Sbjct: 109 TDKRMSRERR 118


Top