BLASTX nr result

ID: Coptis24_contig00019349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019349
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34709.3| unnamed protein product [Vitis vinifera]               79   8e-30
ref|XP_002276931.1| PREDICTED: uncharacterized protein LOC100265...    78   2e-27
emb|CAN68047.1| hypothetical protein VITISV_017724 [Vitis vinifera]    78   3e-27
ref|XP_002509767.1| conserved hypothetical protein [Ricinus comm...    74   4e-27
ref|XP_002304482.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-23

>emb|CBI34709.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score = 79.3 bits (194), Expect(2) = 8e-30
 Identities = 64/157 (40%), Positives = 90/157 (57%), Gaps = 4/157 (2%)
 Frame = +3

Query: 303 VKFEVDDNDNKPYESQKNKARPSSAGHAMDGITKGSSIPNVILRKPSAAFPEDDIEVKKS 482
           +KFE DD  N+     K +++P  AG A+   TK +++PNVILRKP+  F EDD++  K 
Sbjct: 130 IKFEGDDKLNE----MKKQSQP--AGKAVQN-TK-NTVPNVILRKPTV-FNEDDVD-SKP 179

Query: 483 SRLTIKPNLSLRMSKGETKDNFSDITLLKKPEPSRLVIDADQDKVNLDDSEVSSFDLSNM 662
           SRL +KPNLSL+M K   +  FSD+TLL+KPE    +    ++  +   SE +    +N 
Sbjct: 180 SRLRMKPNLSLKMKK---EAKFSDMTLLRKPEKLTKISIGIEEGSSSGSSEYTG--AANS 234

Query: 663 ARNDSLEPLGTSNKSFSEGSKIEVKS----TPLEQSD 761
             ND  E L T + SFS G ++   S     PLE SD
Sbjct: 235 MNNDIEESLETRDDSFSMGPELVDNSIIGLQPLEHSD 271



 Score = 77.8 bits (190), Expect(2) = 8e-30
 Identities = 43/73 (58%), Positives = 51/73 (69%), Gaps = 8/73 (10%)
 Frame = +2

Query: 2   KLTLAKIAGRKANPDVSYLEIEKAFNKKNFQIGEFV--------EEFQGRPSSKSGLNLV 157
           KLTLAKI GRK+NPDV+ LEIEK F+KK  ++ +           E  G P+S SGLNLV
Sbjct: 63  KLTLAKIMGRKSNPDVTPLEIEKKFHKKQGKLADAEVPDIVFDGSEQGGSPNSLSGLNLV 122

Query: 158 RPVPKKGVKFEVD 196
           RPVPKKG+KFE D
Sbjct: 123 RPVPKKGIKFEGD 135


>ref|XP_002276931.1| PREDICTED: uncharacterized protein LOC100265091 [Vitis vinifera]
          Length = 773

 Score = 77.8 bits (190), Expect(2) = 2e-27
 Identities = 43/73 (58%), Positives = 51/73 (69%), Gaps = 8/73 (10%)
 Frame = +2

Query: 2   KLTLAKIAGRKANPDVSYLEIEKAFNKKNFQIGEFV--------EEFQGRPSSKSGLNLV 157
           KLTLAKI GRK+NPDV+ LEIEK F+KK  ++ +           E  G P+S SGLNLV
Sbjct: 63  KLTLAKIMGRKSNPDVTPLEIEKKFHKKQGKLADAEVPDIVFDGSEQGGSPNSLSGLNLV 122

Query: 158 RPVPKKGVKFEVD 196
           RPVPKKG+KFE D
Sbjct: 123 RPVPKKGIKFEGD 135



 Score = 71.2 bits (173), Expect(2) = 2e-27
 Identities = 58/137 (42%), Positives = 84/137 (61%), Gaps = 3/137 (2%)
 Frame = +3

Query: 303 VKFEVDDNDNKPYESQKNKARPSSAGHAMDGITKGSSIPNVILRKPSAAFPEDDIEVKKS 482
           +KFE DD  N+     K +++P  AG A+   TK +++PNVILRKP+  F EDD++  K 
Sbjct: 130 IKFEGDDKLNE----MKKQSQP--AGKAVQN-TK-NTVPNVILRKPT-VFNEDDVD-SKP 179

Query: 483 SRLTIKPNLSLRMSKGETKDNFSDITLLKKPEPSRLVIDADQDKVNLDDSEVSSFDLSNM 662
           SRL +KPNLSL+M K   +  FSD+TLL+KPE  +L  DA+      +  + SS D   +
Sbjct: 180 SRLRMKPNLSLKMKK---EAKFSDMTLLRKPE--KLSADAEN-----ETKQESSDDARAL 229

Query: 663 ARNDS---LEPLGTSNK 704
           A +D+   L+  GT +K
Sbjct: 230 ATDDTELKLQEEGTDDK 246


>emb|CAN68047.1| hypothetical protein VITISV_017724 [Vitis vinifera]
          Length = 768

 Score = 77.8 bits (190), Expect(2) = 3e-27
 Identities = 43/73 (58%), Positives = 51/73 (69%), Gaps = 8/73 (10%)
 Frame = +2

Query: 2   KLTLAKIAGRKANPDVSYLEIEKAFNKKNFQIGEFV--------EEFQGRPSSKSGLNLV 157
           KLTLAKI GRK+NPDV+ LEIEK F+KK  ++ +           E  G P+S SGLNLV
Sbjct: 63  KLTLAKIMGRKSNPDVTPLEIEKKFHKKQGKLADAEVPDIVFDGSEQGGSPNSLSGLNLV 122

Query: 158 RPVPKKGVKFEVD 196
           RPVPKKG+KFE D
Sbjct: 123 RPVPKKGIKFEGD 135



 Score = 70.5 bits (171), Expect(2) = 3e-27
 Identities = 58/137 (42%), Positives = 83/137 (60%), Gaps = 3/137 (2%)
 Frame = +3

Query: 303 VKFEVDDNDNKPYESQKNKARPSSAGHAMDGITKGSSIPNVILRKPSAAFPEDDIEVKKS 482
           +KFE DD  N+     K ++ P  AG A+   TK +++PNVILRKP+  F EDD++  K 
Sbjct: 130 IKFEGDDKLNE----MKKQSXP--AGKAVQN-TK-NTVPNVILRKPT-VFNEDDVD-SKP 179

Query: 483 SRLTIKPNLSLRMSKGETKDNFSDITLLKKPEPSRLVIDADQDKVNLDDSEVSSFDLSNM 662
           SRL +KPNLSL+M K   +  FSD+TLL+KPE  +L  DA+      +  + SS D   +
Sbjct: 180 SRLRMKPNLSLKMKK---EAKFSDMTLLRKPE--KLSADAEN-----ETKQESSDDARAL 229

Query: 663 ARNDS---LEPLGTSNK 704
           A +D+   L+  GT +K
Sbjct: 230 ATDDTELKLQEEGTDDK 246


>ref|XP_002509767.1| conserved hypothetical protein [Ricinus communis]
           gi|223549666|gb|EEF51154.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 748

 Score = 73.9 bits (180), Expect(2) = 4e-27
 Identities = 41/71 (57%), Positives = 49/71 (69%), Gaps = 6/71 (8%)
 Frame = +2

Query: 2   KLTLAKIAGRKANPDVSYLEIEKAFNKKNFQIGEF------VEEFQGRPSSKSGLNLVRP 163
           KLTLAKI  RKANPDVSYLE+EK+F K   +I E       V + +   +S  GLNLVRP
Sbjct: 80  KLTLAKIMARKANPDVSYLEVEKSFYKNKGKIVEIKELPFDVAKDKKSSNSLDGLNLVRP 139

Query: 164 VPKKGVKFEVD 196
           VPK+GVKF+ D
Sbjct: 140 VPKEGVKFQTD 150



 Score = 73.9 bits (180), Expect(2) = 4e-27
 Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
 Frame = +3

Query: 303 VKFEVDDNDNKPYESQKNKARPSSAGHAMDGITKGSSIPNVILRKPSAAFPEDDIEVKKS 482
           VKF+ D+    P  ++ +K    +  +         SIPNVILRKP A F EDD+E K S
Sbjct: 145 VKFQTDEKLKLPEINKLSKPIEKTIDYTK------RSIPNVILRKP-AMFVEDDVEDKPS 197

Query: 483 SR--LTIKPNLSLRMSKGETKDNFSDITLLKKPEPSRLVIDADQDKVNLDDSEV----SS 644
           SR  + I+PNL+L+M   +  + FSD+TLL+KPEP    ++ ++ + +LD +E      +
Sbjct: 198 SRSKVRIQPNLTLKMRNNQANEKFSDMTLLRKPEP----VNVEEKQESLDGAETKISNGA 253

Query: 645 FDLSNMARNDSLEPLG--------TSNKSFSEGSKIEVKSTPLEQ 755
            +L      D ++  G        TS     E S+    S P EQ
Sbjct: 254 TELGTGKEEDDIKYSGFTLLKKPETSVSDVDESSETVGSSVPKEQ 298


>ref|XP_002304482.1| predicted protein [Populus trichocarpa] gi|222841914|gb|EEE79461.1|
           predicted protein [Populus trichocarpa]
          Length = 816

 Score = 75.1 bits (183), Expect(2) = 2e-23
 Identities = 62/189 (32%), Positives = 91/189 (48%), Gaps = 25/189 (13%)
 Frame = +3

Query: 306 KFEVDDNDNKPYESQKNKARPSSAGHAMDGITKGSSIPNVILRKPSAAFPEDDIEVKKS- 482
           KF+ +D   KP    K K        AMD   +  S+PNVILRKPS  + EDD+E + S 
Sbjct: 162 KFQEED---KPVAPPKIKKSNQPVEKAMDNAKR--SVPNVILRKPS-LYVEDDVEDRPSR 215

Query: 483 SRLTIKPNLSLRMSKGETKDNFSDITLLKKPEPSRLVIDADQDKVNL------------- 623
           +R+ I PNL+L+M   + K+ FSD+TLL+KP P  + +D   D  NL             
Sbjct: 216 NRVNILPNLTLKMGNDQNKEKFSDMTLLRKPRP--MSVDEKPDSGNLGTEVNHDGAGMRV 273

Query: 624 ----DDSEVSSFDLSNMARNDSL---EPLGTSNKSFSEGSKIEVK----STPLEQSDFEL 770
                ++  S F L    +   +   E   T + SF E  ++E        P E+S+ E 
Sbjct: 274 EKEEGENRYSGFTLLKKPKTMKIEFKESSETGDASFVEEQEVEDNYISGRQPSEKSNIEF 333

Query: 771 DGKEASITQ 797
             +EA++ Q
Sbjct: 334 TEEEAALNQ 342



 Score = 60.5 bits (145), Expect(2) = 2e-23
 Identities = 38/86 (44%), Positives = 46/86 (53%), Gaps = 23/86 (26%)
 Frame = +2

Query: 2   KLTLAKIAGRKANPDVSYLEIEKAFNKKNFQIGEFVE-----EFQGRPSSK--------- 139
           KLTLAKI  RK NPDVSYLE+EK+F K   +  E  E       + +PS+          
Sbjct: 79  KLTLAKIMARKENPDVSYLEVEKSFYKNKGRAVEIKEVPFDVSMKKKPSNTIKEVPFDVS 138

Query: 140 ---------SGLNLVRPVPKKGVKFE 190
                     GLNLVRPVPK+G KF+
Sbjct: 139 MKKKPSNVLDGLNLVRPVPKEGFKFQ 164


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