BLASTX nr result

ID: Coptis24_contig00019345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019345
         (875 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274736.1| PREDICTED: 125 kDa kinesin-related protein [...   119   9e-25
ref|XP_002533001.1| Bipolar kinesin KRP-130, putative [Ricinus c...   100   7e-19
ref|XP_004161696.1| PREDICTED: 125 kDa kinesin-related protein-l...    97   4e-18
ref|XP_004142211.1| PREDICTED: 125 kDa kinesin-related protein-l...    96   1e-17
ref|XP_002309045.1| predicted protein [Populus trichocarpa] gi|2...    92   1e-16

>ref|XP_002274736.1| PREDICTED: 125 kDa kinesin-related protein [Vitis vinifera]
            gi|297741543|emb|CBI32675.3| unnamed protein product
            [Vitis vinifera]
          Length = 1048

 Score =  119 bits (298), Expect = 9e-25
 Identities = 63/125 (50%), Positives = 84/125 (67%)
 Frame = +3

Query: 3    INNSLLLDHETMKEIESKSTLCSGPLRLLQENHSESILNIRNRADHCLTKDYLVDHFTST 182
            +N+SL+ DHET K I+S S LC   L+ +QE H ESI  I N A+ CLT+DYLVD   +T
Sbjct: 927  VNDSLMRDHETKKGIDSMSMLCLEHLKSVQEKHDESISKILNSAEKCLTEDYLVDE--NT 984

Query: 183  TPEKQAIVVPTVESIEDLRTPALEDVVAKLRSLNGSKGVNAGSKIQNQQHPCSISPNRPP 362
            TP+K+AI +P++ SIE++RTPA  D+   + + N SK      KIQ QQH  + SPNR P
Sbjct: 985  TPKKRAIAIPSLASIEEMRTPAFNDLTENMIADNTSKWAPTDGKIQQQQH-VAASPNRTP 1043

Query: 363  FAAVN 377
            F +VN
Sbjct: 1044 FGSVN 1048


>ref|XP_002533001.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
            gi|223527212|gb|EEF29376.1| Bipolar kinesin KRP-130,
            putative [Ricinus communis]
          Length = 1044

 Score = 99.8 bits (247), Expect = 7e-19
 Identities = 59/126 (46%), Positives = 81/126 (64%), Gaps = 1/126 (0%)
 Frame = +3

Query: 3    INNSLLLDHETMKEIESKSTLCSGPLRLLQENHSESILNIRNRADHCLTKDYLVDHFTST 182
            + +SL+ D E+ KEIES ST C   L+ +QENH +SI NIR++A+  LTKDYLVD  T  
Sbjct: 922  VEDSLMRDRESKKEIESISTQCLDQLKSIQENHGQSIANIRSKAEKSLTKDYLVDQQTCE 981

Query: 183  TPEKQAIVVPTVESIEDLRTPALEDVVAKLRSL-NGSKGVNAGSKIQNQQHPCSISPNRP 359
            T +++ I VP++ SIE++R  A E++    ++L N SK     SK   Q    + SPNRP
Sbjct: 982  TLQRRVISVPSLASIEEMRIGAYENLKEDNKNLENRSKWGQNESKTLLQ---AAASPNRP 1038

Query: 360  PFAAVN 377
            PFA VN
Sbjct: 1039 PFADVN 1044


>ref|XP_004161696.1| PREDICTED: 125 kDa kinesin-related protein-like [Cucumis sativus]
          Length = 1049

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 53/125 (42%), Positives = 79/125 (63%)
 Frame = +3

Query: 3    INNSLLLDHETMKEIESKSTLCSGPLRLLQENHSESILNIRNRADHCLTKDYLVDHFTST 182
            +N+SL LDHE  KE++S ST C   L+  Q+NH  +I  IR++A+ CL KDYLVD  + +
Sbjct: 929  VNDSLRLDHENKKELDSISTSCLDELKSTQDNHGRTISKIRDQAEQCLIKDYLVDQHSDS 988

Query: 183  TPEKQAIVVPTVESIEDLRTPALEDVVAKLRSLNGSKGVNAGSKIQNQQHPCSISPNRPP 362
            TP+K+AI VP++ SIE++RTP +  +   + + N  K      K+QN     ++ P+R P
Sbjct: 989  TPKKRAIAVPSLASIEEMRTP-VHYLKEGISTENKLKWGLIEGKVQN---GAALIPSRAP 1044

Query: 363  FAAVN 377
            F  VN
Sbjct: 1045 FTNVN 1049


>ref|XP_004142211.1| PREDICTED: 125 kDa kinesin-related protein-like [Cucumis sativus]
          Length = 1049

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 53/125 (42%), Positives = 78/125 (62%)
 Frame = +3

Query: 3    INNSLLLDHETMKEIESKSTLCSGPLRLLQENHSESILNIRNRADHCLTKDYLVDHFTST 182
            +N+SL LDHE  KE++S ST C   L+  Q+NH  +I  IR++A+ CL KDYLVD  + +
Sbjct: 929  VNDSLRLDHENKKELDSISTSCLDELKSTQDNHGRTISKIRDQAEQCLIKDYLVDQHSDS 988

Query: 183  TPEKQAIVVPTVESIEDLRTPALEDVVAKLRSLNGSKGVNAGSKIQNQQHPCSISPNRPP 362
            TP+K+AI VP++ SIE++RTP +  +   + + N  K      K+QN     +  P+R P
Sbjct: 989  TPKKRAIAVPSLASIEEMRTP-VHYLKEGISTENKLKWGLIEGKVQN---GAASIPSRAP 1044

Query: 363  FAAVN 377
            F  VN
Sbjct: 1045 FTNVN 1049


>ref|XP_002309045.1| predicted protein [Populus trichocarpa] gi|222855021|gb|EEE92568.1|
            predicted protein [Populus trichocarpa]
          Length = 1049

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 55/127 (43%), Positives = 81/127 (63%), Gaps = 2/127 (1%)
 Frame = +3

Query: 3    INNSLLLDHETMKEIESKSTLCSGPLRLLQENHSESILNIRNRADHCLTKDYLVDHFTST 182
            +++S++ D ET KEI+S ++LC G L+  QENH + I NIR++A+ CLTKDYLVD  + T
Sbjct: 926  VDDSMMRDQETKKEIDSITSLCLGQLKSTQENHGDRISNIRSKAEKCLTKDYLVDQNSGT 985

Query: 183  TPEKQAI-VVPTVESIEDLRTPALEDVVAKLRSL-NGSKGVNAGSKIQNQQHPCSISPNR 356
            TP+++ I  +P++ESIE+ RT    +   +  +L   +K   A SKI  + H  S   NR
Sbjct: 986  TPKRRVIAAIPSLESIEERRTVVASESPKEHGNLEKRAKWSPAESKIP-RHHAASF--NR 1042

Query: 357  PPFAAVN 377
             PF  VN
Sbjct: 1043 APFTDVN 1049


Top