BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019341
         (1252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi...   265   2e-68
ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|2...   263   7e-68
ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containi...   257   4e-66
ref|XP_002529286.1| pentatricopeptide repeat-containing protein,...   250   5e-64
ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containi...   249   8e-64

>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic [Vitis vinifera]
            gi|298204537|emb|CBI23812.3| unnamed protein product
            [Vitis vinifera]
          Length = 659

 Score =  265 bits (676), Expect = 2e-68
 Identities = 130/181 (71%), Positives = 155/181 (85%)
 Frame = +2

Query: 2    DMHSKGHQPDEELCSSLILQLGRVGAPSEAFSCYNMLRYSKRTMNKALHGKMLNILVAGG 181
            DMH+KGHQP+EELCSSLI  LG++ A S+AFS YNMLRYSKRTM KALH K+L+ILVAG 
Sbjct: 476  DMHNKGHQPEEELCSSLISHLGKIRAHSQAFSVYNMLRYSKRTMCKALHEKILHILVAGR 535

Query: 182  ILKDAYVVVKDNADRISHASLKKFAVSFMKKGNINLINDVVKAVHGSGHKIDQEVFRMAV 361
            +LKDAYVVVKDN   IS  S+KKFA +FMK GN+NLINDV+KA+HGSG+KIDQE+F+MAV
Sbjct: 536  LLKDAYVVVKDNEGLISKPSIKKFATAFMKFGNVNLINDVMKAIHGSGYKIDQELFQMAV 595

Query: 362  SRYIEEPEKKDLLLQLLHWMTGQGYAVDPASRNLVLKNADLFGRHLIAEILSKQHKMSKL 541
            +RYI EPEKK+LLL LL WM GQGY VD ++RN++LKN+ LFGR LIAE+LSKQH  +K 
Sbjct: 596  TRYIAEPEKKELLLHLLQWMPGQGYVVDSSTRNMILKNSHLFGRQLIAEMLSKQHARAKA 655

Query: 542  L 544
            L
Sbjct: 656  L 656


>ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|222846925|gb|EEE84472.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  263 bits (672), Expect = 7e-68
 Identities = 131/184 (71%), Positives = 156/184 (84%)
 Frame = +2

Query: 2   DMHSKGHQPDEELCSSLILQLGRVGAPSEAFSCYNMLRYSKRTMNKALHGKMLNILVAGG 181
           DMH KGHQP EELCSSLIL LG++ A +EAFS Y+ML+ SKRTM+KA H  +L+IL+AG 
Sbjct: 379 DMHRKGHQPMEELCSSLILHLGKIKAHAEAFSVYSMLKSSKRTMSKAFHEDILHILIAGR 438

Query: 182 ILKDAYVVVKDNADRISHASLKKFAVSFMKKGNINLINDVVKAVHGSGHKIDQEVFRMAV 361
           +LKDAYVVVKDNA+ IS A++KKFA SF+K G+INLINDV+K +HGSG+KIDQE+F MAV
Sbjct: 439 LLKDAYVVVKDNAELISPAAIKKFASSFVKLGDINLINDVMKVIHGSGYKIDQELFLMAV 498

Query: 362 SRYIEEPEKKDLLLQLLHWMTGQGYAVDPASRNLVLKNADLFGRHLIAEILSKQHKMSKL 541
           SRYI EPEKKDLL+QLL WM GQGY VD ++RNL+LKN+ LFGR LIAEILSKQH  SK 
Sbjct: 499 SRYIAEPEKKDLLIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQHMTSKA 558

Query: 542 LRTQ 553
           L+ Q
Sbjct: 559 LKAQ 562


>ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like [Cucumis sativus]
          Length = 668

 Score =  257 bits (657), Expect = 4e-66
 Identities = 127/185 (68%), Positives = 154/185 (83%)
 Frame = +2

Query: 2    DMHSKGHQPDEELCSSLILQLGRVGAPSEAFSCYNMLRYSKRTMNKALHGKMLNILVAGG 181
            DMH KGHQP+EELCSSLIL LG + A SEAFS YN+L+YSKRTM KALH K+L+IL+AG 
Sbjct: 478  DMHRKGHQPEEELCSSLILSLGNIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGR 537

Query: 182  ILKDAYVVVKDNADRISHASLKKFAVSFMKKGNINLINDVVKAVHGSGHKIDQEVFRMAV 361
            +LKDAYVVVKDNA  IS  +++KFA  FMK GN+NLINDV+KA+HGSG+KIDQ++F +A 
Sbjct: 538  LLKDAYVVVKDNAGVISKPAIRKFAFGFMKFGNVNLINDVMKAIHGSGYKIDQDLFMIAT 597

Query: 362  SRYIEEPEKKDLLLQLLHWMTGQGYAVDPASRNLVLKNADLFGRHLIAEILSKQHKMSKL 541
            SRYIE PEKKDL +QLL WM GQGY VD ++RNL+LKNA LFGR LIAEILSK   +SK 
Sbjct: 598  SRYIELPEKKDLFIQLLKWMPGQGYVVDSSTRNLILKNAHLFGRQLIAEILSKHSLLSKS 657

Query: 542  LRTQQ 556
             ++++
Sbjct: 658  TKSRE 662


>ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223531275|gb|EEF33118.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 672

 Score =  250 bits (639), Expect = 5e-64
 Identities = 124/185 (67%), Positives = 153/185 (82%), Gaps = 2/185 (1%)
 Frame = +2

Query: 2    DMHSKGHQPDEELCSSLILQLGRVGAPSEAFSCYNMLRYSKRTMNKALHGKMLNILVAGG 181
            DMH KGHQP+EELCS LI  LG+  A +EAFS Y ML+Y KRTM KALH K+L++L+ G 
Sbjct: 487  DMHRKGHQPEEELCSMLIFHLGKAKAYTEAFSVYTMLKYGKRTMCKALHEKILHVLLGGQ 546

Query: 182  ILKDAYVVVKDNADRISHASLKKFAVSFMKKGNINLINDVVKAVHGSGHKIDQ--EVFRM 355
            +LKDAYVVVKDNA+ IS A++KKFA +FMK GNINLINDV+K +H SG+KIDQ  E+F+M
Sbjct: 547  LLKDAYVVVKDNAELISQAAIKKFANAFMKLGNINLINDVMKVIHSSGYKIDQASELFQM 606

Query: 356  AVSRYIEEPEKKDLLLQLLHWMTGQGYAVDPASRNLVLKNADLFGRHLIAEILSKQHKMS 535
            A+SRYI +PEKKDLL+QLL WM G GY VD ++RNL+LK++ LFGR LIAEILSKQH +S
Sbjct: 607  AISRYIAQPEKKDLLVQLLQWMPGHGYVVDASTRNLILKSSHLFGRQLIAEILSKQHIIS 666

Query: 536  KLLRT 550
            K L++
Sbjct: 667  KTLKS 671


>ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic-like [Glycine max]
          Length = 630

 Score =  249 bits (637), Expect = 8e-64
 Identities = 123/174 (70%), Positives = 147/174 (84%)
 Frame = +2

Query: 2   DMHSKGHQPDEELCSSLILQLGRVGAPSEAFSCYNMLRYSKRTMNKALHGKMLNILVAGG 181
           DMHSKGHQP EELCSSLI  LG+V A SEAFS YNML+YSKRTM K+LH K+L+IL+AG 
Sbjct: 446 DMHSKGHQPVEELCSSLISHLGQVNAYSEAFSVYNMLKYSKRTMCKSLHEKILHILLAGQ 505

Query: 182 ILKDAYVVVKDNADRISHASLKKFAVSFMKKGNINLINDVVKAVHGSGHKIDQEVFRMAV 361
           +LKDAYVVVKDNA  IS  + KKFA +FMK GN+N INDV+K +H  G+K+DQ++F MAV
Sbjct: 506 LLKDAYVVVKDNAKFISRPATKKFASAFMKSGNLNYINDVLKTLHDCGYKLDQDLFAMAV 565

Query: 362 SRYIEEPEKKDLLLQLLHWMTGQGYAVDPASRNLVLKNADLFGRHLIAEILSKQ 523
           SRY+++PEKKDLLL LL WM GQGYAVD ++RNL+LKN+ LFGR LIAE+LSKQ
Sbjct: 566 SRYLDQPEKKDLLLHLLQWMAGQGYAVDSSTRNLILKNSHLFGRQLIAEVLSKQ 619