BLASTX nr result

ID: Coptis24_contig00019331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019331
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544246.1| PREDICTED: chromosome-associated kinesin KIF...    67   2e-17
ref|XP_003518261.1| PREDICTED: chromosome-associated kinesin KIF...    67   2e-17
emb|CBI19268.3| unnamed protein product [Vitis vinifera]               65   4e-17
ref|XP_002283825.2| PREDICTED: chromosome-associated kinesin KIF...    65   4e-17
ref|XP_002514043.1| Chromosome-associated kinesin KIF4A, putativ...    67   1e-16

>ref|XP_003544246.1| PREDICTED: chromosome-associated kinesin KIF4-like [Glycine max]
          Length = 1317

 Score = 67.4 bits (163), Expect(2) = 2e-17
 Identities = 32/36 (88%), Positives = 32/36 (88%)
 Frame = -3

Query: 211 ASLVDALFHGYNATGLAYVQTGYGKTYTMGTNYTGE 104
           A LVDALFHGYNAT LAY QTG GKTYTMGTNYTGE
Sbjct: 94  APLVDALFHGYNATVLAYGQTGSGKTYTMGTNYTGE 129



 Score = 46.2 bits (108), Expect(2) = 2e-17
 Identities = 21/36 (58%), Positives = 30/36 (83%)
 Frame = -1

Query: 108 ERHSGGIIPKVMETIFLKIGDMKDNVGFLIKMTFIE 1
           E ++GGIIPKVMETIF ++  MK++  FLI+++FIE
Sbjct: 129 EDNAGGIIPKVMETIFKRVQTMKESSEFLIRVSFIE 164


>ref|XP_003518261.1| PREDICTED: chromosome-associated kinesin KIF4-like [Glycine max]
          Length = 1299

 Score = 67.4 bits (163), Expect(2) = 2e-17
 Identities = 32/36 (88%), Positives = 32/36 (88%)
 Frame = -3

Query: 211 ASLVDALFHGYNATGLAYVQTGYGKTYTMGTNYTGE 104
           A LVDALFHGYNAT LAY QTG GKTYTMGTNYTGE
Sbjct: 69  APLVDALFHGYNATVLAYGQTGSGKTYTMGTNYTGE 104



 Score = 46.2 bits (108), Expect(2) = 2e-17
 Identities = 21/36 (58%), Positives = 30/36 (83%)
 Frame = -1

Query: 108 ERHSGGIIPKVMETIFLKIGDMKDNVGFLIKMTFIE 1
           E ++GGIIPKVMETIF ++  MK++  FLI+++FIE
Sbjct: 104 EDNAGGIIPKVMETIFKRVQTMKESSEFLIRVSFIE 139


>emb|CBI19268.3| unnamed protein product [Vitis vinifera]
          Length = 1279

 Score = 65.1 bits (157), Expect(2) = 4e-17
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = -3

Query: 205 LVDALFHGYNATGLAYVQTGYGKTYTMGTNYTGE 104
           L+DALFHGYNAT LAY QTG GKTYTMGTNYTGE
Sbjct: 92  LLDALFHGYNATVLAYGQTGSGKTYTMGTNYTGE 125



 Score = 47.8 bits (112), Expect(2) = 4e-17
 Identities = 22/36 (61%), Positives = 29/36 (80%)
 Frame = -1

Query: 108 ERHSGGIIPKVMETIFLKIGDMKDNVGFLIKMTFIE 1
           E  SGGIIPKVME+IF ++  MKD+  FLI+++FIE
Sbjct: 125 EESSGGIIPKVMESIFSRVEAMKDSTEFLIRVSFIE 160


>ref|XP_002283825.2| PREDICTED: chromosome-associated kinesin KIF4-like [Vitis vinifera]
          Length = 1261

 Score = 65.1 bits (157), Expect(2) = 4e-17
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = -3

Query: 205 LVDALFHGYNATGLAYVQTGYGKTYTMGTNYTGE 104
           L+DALFHGYNAT LAY QTG GKTYTMGTNYTGE
Sbjct: 71  LLDALFHGYNATVLAYGQTGSGKTYTMGTNYTGE 104



 Score = 47.8 bits (112), Expect(2) = 4e-17
 Identities = 22/36 (61%), Positives = 29/36 (80%)
 Frame = -1

Query: 108 ERHSGGIIPKVMETIFLKIGDMKDNVGFLIKMTFIE 1
           E  SGGIIPKVME+IF ++  MKD+  FLI+++FIE
Sbjct: 104 EESSGGIIPKVMESIFSRVEAMKDSTEFLIRVSFIE 139


>ref|XP_002514043.1| Chromosome-associated kinesin KIF4A, putative [Ricinus communis]
           gi|223547129|gb|EEF48626.1| Chromosome-associated
           kinesin KIF4A, putative [Ricinus communis]
          Length = 1290

 Score = 66.6 bits (161), Expect(2) = 1e-16
 Identities = 31/36 (86%), Positives = 32/36 (88%)
 Frame = -3

Query: 211 ASLVDALFHGYNATGLAYVQTGYGKTYTMGTNYTGE 104
           A LVDA+FHGYNAT LAY QTG GKTYTMGTNYTGE
Sbjct: 73  APLVDAIFHGYNATVLAYGQTGSGKTYTMGTNYTGE 108



 Score = 44.3 bits (103), Expect(2) = 1e-16
 Identities = 20/31 (64%), Positives = 26/31 (83%)
 Frame = -1

Query: 93  GIIPKVMETIFLKIGDMKDNVGFLIKMTFIE 1
           GIIPKVMETIF ++  MKD+  FLI+++FIE
Sbjct: 113 GIIPKVMETIFQRVETMKDSTEFLIRVSFIE 143


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