BLASTX nr result

ID: Coptis24_contig00019323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019323
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277720.1| PREDICTED: methyltransferase-like protein 23...   181   6e-44
ref|XP_003516539.1| PREDICTED: methyltransferase-like protein 23...   175   3e-42
ref|XP_002886380.1| predicted protein [Arabidopsis lyrata subsp....   169   2e-40
ref|XP_002327732.1| predicted protein [Populus trichocarpa] gi|2...   168   4e-40
ref|NP_974085.1| Putative methyltransferase family protein [Arab...   166   2e-39

>ref|XP_002277720.1| PREDICTED: methyltransferase-like protein 23 [Vitis vinifera]
           gi|296084695|emb|CBI25837.3| unnamed protein product
           [Vitis vinifera]
          Length = 236

 Score =  181 bits (459), Expect = 6e-44
 Identities = 91/138 (65%), Positives = 101/138 (73%), Gaps = 3/138 (2%)
 Frame = -3

Query: 409 KQMTKISSHSFGQ---TSEGFXXXXXXXXXXEYGMFVWPCSVALAEYVWQQRLRFSGVTV 239
           + MT  S H FG    + + F          +YG+FVWPCSV LAEYVWQQR RF G +V
Sbjct: 18  QHMTTTSRHHFGNARDSGDAFSITIIESMKEDYGLFVWPCSVVLAEYVWQQRSRFLGASV 77

Query: 238 VELGAGTSLPGLVAAKLGSDVTLTDNSTRPEVLENMERTRKLNHLNCTVLGLTWGDWAAP 59
           VELGAGTSLPGLVAAKLGSDVTLTDN+ R EVL+NM R   LN L C VLGLTWG W A 
Sbjct: 78  VELGAGTSLPGLVAAKLGSDVTLTDNAVRLEVLDNMRRVCDLNELKCEVLGLTWGMWDAA 137

Query: 58  IFNLKPKIVLGADVLYDT 5
           +FNLKPKI+LGADVLYDT
Sbjct: 138 VFNLKPKIILGADVLYDT 155


>ref|XP_003516539.1| PREDICTED: methyltransferase-like protein 23-like [Glycine max]
          Length = 203

 Score =  175 bits (444), Expect = 3e-42
 Identities = 88/136 (64%), Positives = 101/136 (74%), Gaps = 2/136 (1%)
 Frame = -3

Query: 403 MTKISSHSFGQTSE--GFXXXXXXXXXXEYGMFVWPCSVALAEYVWQQRLRFSGVTVVEL 230
           MT +S H FG  SE   F          +YG+FVWPCSV LAEY+WQ + RFSG TVVEL
Sbjct: 15  MTTVSQHFFGDDSETPSFSISIIENMKEDYGLFVWPCSVVLAEYIWQHKHRFSGATVVEL 74

Query: 229 GAGTSLPGLVAAKLGSDVTLTDNSTRPEVLENMERTRKLNHLNCTVLGLTWGDWAAPIFN 50
           GAGTSLPGLVAAKLG+ VTLTD+STR EVL+NM R   LN L C VLGLTWG W + IF+
Sbjct: 75  GAGTSLPGLVAAKLGARVTLTDDSTRLEVLDNMRRVCDLNKLECNVLGLTWGVWDSSIFS 134

Query: 49  LKPKIVLGADVLYDTK 2
           L+P I+LGADVLYD+K
Sbjct: 135 LQPTIILGADVLYDSK 150


>ref|XP_002886380.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332221|gb|EFH62639.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 194

 Score =  169 bits (428), Expect = 2e-40
 Identities = 83/135 (61%), Positives = 101/135 (74%), Gaps = 3/135 (2%)
 Frame = -3

Query: 400 TKISSHSF---GQTSEGFXXXXXXXXXXEYGMFVWPCSVALAEYVWQQRLRFSGVTVVEL 230
           T IS H F   G +              EYG+FVWPCSV LAEYVWQQR RF   +V+EL
Sbjct: 5   TTISQHDFYGDGDSETSISISVIENLKEEYGLFVWPCSVILAEYVWQQRSRFRHSSVLEL 64

Query: 229 GAGTSLPGLVAAKLGSDVTLTDNSTRPEVLENMERTRKLNHLNCTVLGLTWGDWAAPIFN 50
           GAGTSLPGLVAAK+G++VTLTD++++PEVL+NM R  +LN LNC V+GLTWG W APIF+
Sbjct: 65  GAGTSLPGLVAAKVGANVTLTDDASKPEVLDNMRRVCELNKLNCNVMGLTWGVWDAPIFD 124

Query: 49  LKPKIVLGADVLYDT 5
           L+P I+LGADVLYD+
Sbjct: 125 LRPNIILGADVLYDS 139


>ref|XP_002327732.1| predicted protein [Populus trichocarpa] gi|222836817|gb|EEE75210.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  168 bits (426), Expect = 4e-40
 Identities = 80/105 (76%), Positives = 89/105 (84%)
 Frame = -3

Query: 322 YGMFVWPCSVALAEYVWQQRLRFSGVTVVELGAGTSLPGLVAAKLGSDVTLTDNSTRPEV 143
           YG+FVWPCSV LAEYVWQQRL+FSGV+V+ELGAGT LPGLVAAKLG DVTLTD+S + EV
Sbjct: 5   YGLFVWPCSVVLAEYVWQQRLQFSGVSVLELGAGTCLPGLVAAKLGLDVTLTDDSNKLEV 64

Query: 142 LENMERTRKLNHLNCTVLGLTWGDWAAPIFNLKPKIVLGADVLYD 8
           L+NM R   LN LNC VLGLTWG W   IF LKPK++LGADVLYD
Sbjct: 65  LDNMRRVCDLNQLNCKVLGLTWGVWDESIFTLKPKLILGADVLYD 109


>ref|NP_974085.1| Putative methyltransferase family protein [Arabidopsis thaliana]
           gi|332196036|gb|AEE34157.1| Putative methyltransferase
           family protein [Arabidopsis thaliana]
          Length = 196

 Score =  166 bits (419), Expect = 2e-39
 Identities = 82/133 (61%), Positives = 99/133 (74%), Gaps = 1/133 (0%)
 Frame = -3

Query: 400 TKISSHSF-GQTSEGFXXXXXXXXXXEYGMFVWPCSVALAEYVWQQRLRFSGVTVVELGA 224
           T IS H+F G                EYG+FVWPCSV LAEYVWQ R RF   +++ELGA
Sbjct: 7   TTISQHNFYGAGDSETCISIIENLKEEYGLFVWPCSVILAEYVWQHRSRFRDSSILELGA 66

Query: 223 GTSLPGLVAAKLGSDVTLTDNSTRPEVLENMERTRKLNHLNCTVLGLTWGDWAAPIFNLK 44
           GTSLPGLVAAK+G++VTLTD++T+PEVL+NM R  +LN LNC VLGLTWG W API +L+
Sbjct: 67  GTSLPGLVAAKVGANVTLTDDATKPEVLDNMRRVCELNKLNCNVLGLTWGVWDAPILDLR 126

Query: 43  PKIVLGADVLYDT 5
           P I+LGADVLYD+
Sbjct: 127 PNIILGADVLYDS 139


Top