BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019312
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09
ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containi...    56   3e-06

>ref|XP_004136798.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
           gi|449494815|ref|XP_004159654.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial-like [Cucumis sativus]
          Length = 405

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/74 (41%), Positives = 49/74 (66%)
 Frame = +2

Query: 56  PPTQYRKSKTLIRNETDPDKIAQVFLKTSDNPRFYRDRSAFHISVRKLAKLQRFDLVEKI 235
           P    R +K+ I +++DPDK+AQ F++ S  P F R R  +H S+RKLA+ QRFDL++ I
Sbjct: 36  PFPSLRAAKSAILSQSDPDKLAQSFIQASTLPSFCRYRPIYHQSIRKLARAQRFDLIDVI 95

Query: 236 LEQQIETPLLKTEG 277
           ++   ++P   +EG
Sbjct: 96  IQSHHKSPSATSEG 109


>ref|XP_002272104.1| PREDICTED: pentatricopeptide repeat-containing protein At1g61870,
           mitochondrial [Vitis vinifera]
           gi|297738261|emb|CBI27462.3| unnamed protein product
           [Vitis vinifera]
          Length = 386

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
 Frame = +2

Query: 56  PPTQYRKSKTLIRNETDPDKIAQVFLKTSDN-PRFYRDRSAFHISVRKLAKLQRFDLVEK 232
           P T +  +K+ + +E DP+K+A +F   S N  RF R R  + +S R+L++  R DLVE+
Sbjct: 23  PFTTFLAAKSAVESEPDPEKLAHIFHHQSSNFARFRRHRPLYQLSCRRLSRSGRLDLVER 82

Query: 233 ILEQQIETPLLKTEG 277
           +++ Q   P  +TEG
Sbjct: 83  LIDHQKTLPHPRTEG 97