BLASTX nr result

ID: Coptis24_contig00019310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019310
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315357.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
ref|XP_002269110.2| PREDICTED: glucomannan 4-beta-mannosyltransf...   134   6e-30
emb|CBI30236.3| unnamed protein product [Vitis vinifera]              134   8e-30
ref|XP_002283672.1| PREDICTED: glucomannan 4-beta-mannosyltransf...   134   8e-30
ref|XP_002311972.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29

>ref|XP_002315357.1| predicted protein [Populus trichocarpa] gi|222864397|gb|EEF01528.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score =  134 bits (338), Expect = 6e-30
 Identities = 64/99 (64%), Positives = 75/99 (75%)
 Frame = -2

Query: 298 QFGVIWEXXXXXXXXXXXXXXLCVSLAFVVMLFVERVYMGIVIVLVKLFGRKPEKRYKWE 119
           QFG+IW+              + V L   +MLF+ERVYMGIVIV VKLFG+KP K YKWE
Sbjct: 21  QFGLIWQVLKEPLIVPALKLLVVVCLGMSIMLFIERVYMGIVIVFVKLFGKKPNKMYKWE 80

Query: 118 PMRDDLEMGYSSYPMVLVQIPMFNEKEVYQLFIGAACGL 2
           PM+DD+E+G S+YPMVLVQIPM+NEKEVYQL IGAACGL
Sbjct: 81  PMKDDIEVGNSAYPMVLVQIPMYNEKEVYQLSIGAACGL 119


>ref|XP_002269110.2| PREDICTED: glucomannan 4-beta-mannosyltransferase 9-like [Vitis
           vinifera] gi|147828262|emb|CAN62185.1| hypothetical
           protein VITISV_019367 [Vitis vinifera]
          Length = 529

 Score =  134 bits (338), Expect = 6e-30
 Identities = 66/99 (66%), Positives = 75/99 (75%)
 Frame = -2

Query: 298 QFGVIWEXXXXXXXXXXXXXXLCVSLAFVVMLFVERVYMGIVIVLVKLFGRKPEKRYKWE 119
           + G+IWE              + V L   VMLFVERVYMGIVI LVKLFGRKPE+RY WE
Sbjct: 20  RIGLIWEQTREPLMVPLLKLMVVVCLTMSVMLFVERVYMGIVIALVKLFGRKPEQRYNWE 79

Query: 118 PMRDDLEMGYSSYPMVLVQIPMFNEKEVYQLFIGAACGL 2
           PM+DD+E+G S+YPMVLVQIPM+NEKEVYQL IGAACGL
Sbjct: 80  PMKDDVELGNSAYPMVLVQIPMYNEKEVYQLSIGAACGL 118


>emb|CBI30236.3| unnamed protein product [Vitis vinifera]
          Length = 540

 Score =  134 bits (337), Expect = 8e-30
 Identities = 65/99 (65%), Positives = 75/99 (75%)
 Frame = -2

Query: 298 QFGVIWEXXXXXXXXXXXXXXLCVSLAFVVMLFVERVYMGIVIVLVKLFGRKPEKRYKWE 119
           Q GV+W               + V LA  +MLF ERVY+ IVIVLVKLFGRKP+KRYKWE
Sbjct: 24  QLGVVWSQIKAPVIVPLMSIAVAVCLAMSLMLFFERVYLSIVIVLVKLFGRKPDKRYKWE 83

Query: 118 PMRDDLEMGYSSYPMVLVQIPMFNEKEVYQLFIGAACGL 2
           PM+DD+E+G S+YPMVLVQIPM+NEKEVYQL IGAACGL
Sbjct: 84  PMKDDVELGNSAYPMVLVQIPMYNEKEVYQLSIGAACGL 122


>ref|XP_002283672.1| PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Vitis
           vinifera]
          Length = 533

 Score =  134 bits (337), Expect = 8e-30
 Identities = 65/99 (65%), Positives = 75/99 (75%)
 Frame = -2

Query: 298 QFGVIWEXXXXXXXXXXXXXXLCVSLAFVVMLFVERVYMGIVIVLVKLFGRKPEKRYKWE 119
           Q GV+W               + V LA  +MLF ERVY+ IVIVLVKLFGRKP+KRYKWE
Sbjct: 24  QLGVVWSQIKAPVIVPLMSIAVAVCLAMSLMLFFERVYLSIVIVLVKLFGRKPDKRYKWE 83

Query: 118 PMRDDLEMGYSSYPMVLVQIPMFNEKEVYQLFIGAACGL 2
           PM+DD+E+G S+YPMVLVQIPM+NEKEVYQL IGAACGL
Sbjct: 84  PMKDDVELGNSAYPMVLVQIPMYNEKEVYQLSIGAACGL 122


>ref|XP_002311972.1| predicted protein [Populus trichocarpa] gi|222851792|gb|EEE89339.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score =  132 bits (333), Expect = 2e-29
 Identities = 61/99 (61%), Positives = 75/99 (75%)
 Frame = -2

Query: 298 QFGVIWEXXXXXXXXXXXXXXLCVSLAFVVMLFVERVYMGIVIVLVKLFGRKPEKRYKWE 119
           Q G+IW+              + V L   +MLF+ERVYMG+VIV VKLFG+KP KRYKWE
Sbjct: 12  QIGLIWQVIIEPLIVPVLKLLVVVCLGMSIMLFIERVYMGVVIVFVKLFGKKPNKRYKWE 71

Query: 118 PMRDDLEMGYSSYPMVLVQIPMFNEKEVYQLFIGAACGL 2
           P++DD+E+G S+YPMVLVQ+PM+NEKEVYQL IGAACGL
Sbjct: 72  PIKDDIELGNSAYPMVLVQVPMYNEKEVYQLSIGAACGL 110


Top