BLASTX nr result

ID: Coptis24_contig00019308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019308
         (972 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620394.1| hypothetical protein MTR_6g082340 [Medicago ...   111   8e-44
ref|XP_002304372.1| predicted protein [Populus trichocarpa] gi|2...   104   6e-41
ref|XP_002317613.1| predicted protein [Populus trichocarpa] gi|2...   107   6e-41
ref|XP_002317612.1| predicted protein [Populus trichocarpa] gi|2...   108   2e-40
sp|P0C8L4.1|Y4648_ARATH RecName: Full=Uncharacterized protein At...   107   4e-39

>ref|XP_003620394.1| hypothetical protein MTR_6g082340 [Medicago truncatula]
           gi|355495409|gb|AES76612.1| hypothetical protein
           MTR_6g082340 [Medicago truncatula]
          Length = 215

 Score =  111 bits (277), Expect(2) = 8e-44
 Identities = 58/100 (58%), Positives = 68/100 (68%)
 Frame = -3

Query: 793 IKHYCSSHKILLVGEGDFSFSACLANAFSSGSNMVATSLDSKTFLKKSYAEAMSNIKDLK 614
           I HY SSHKILLVGEGDFSFS CLA  F S  NM ATSLDS+ FL   Y  A  N+ +LK
Sbjct: 6   IMHYRSSHKILLVGEGDFSFSLCLARTFGSAVNMTATSLDSRGFLAMQYGYASINLTELK 65

Query: 613 SRGCTLIHNFDATAMWENWNLLNHSRFDRIIFNFPLAGLF 494
             G T++HN D   M ++  L N ++FDRIIFNFP AG +
Sbjct: 66  DLGWTILHNVDVHNMAQDQRLKN-NKFDRIIFNFPHAGFY 104



 Score = 93.2 bits (230), Expect(2) = 8e-44
 Identities = 51/111 (45%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
 Frame = -2

Query: 521 FQFPSGWFIPWSRRRARKKQLKWNRALVRGFMAQAKELLQNEGEIHITHKTSAIYYEWNL 342
           F FP   F         K Q++ +R LVRGF+  A+ +L   GEIHI+HKTS  Y EW +
Sbjct: 96  FNFPHAGFY---FHEFHKSQIRLHRRLVRGFLQNARYMLSVGGEIHISHKTSQPYSEWRI 152

Query: 341 ENLARHNGLRLIEDVQFSLTDYPGYNNKSGFGG--DNNFHCYPSRTYKFGR 195
           ++LA + GL+LIE+V F  + YPGY NK G G   + +FH   S TYKF R
Sbjct: 153 KDLAENVGLKLIEEVDFQRSFYPGYYNKRGSGSKCNQSFHIGRSSTYKFCR 203


>ref|XP_002304372.1| predicted protein [Populus trichocarpa] gi|222841804|gb|EEE79351.1|
           predicted protein [Populus trichocarpa]
          Length = 413

 Score =  104 bits (259), Expect(2) = 6e-41
 Identities = 55/104 (52%), Positives = 72/104 (69%)
 Frame = -3

Query: 811 EQKNIWIKHYCSSHKILLVGEGDFSFSACLANAFSSGSNMVATSLDSKTFLKKSYAEAMS 632
           E K  W+KHY S+H+ILLVG+GDFSFS  LA +F SGSN+VA+SLD+   L K Y +A S
Sbjct: 14  EDKEKWLKHYSSNHQILLVGDGDFSFSLSLALSFGSGSNIVASSLDTSDVLIKKYKKAKS 73

Query: 631 NIKDLKSRGCTLIHNFDATAMWENWNLLNHSRFDRIIFNFPLAG 500
           N+++L     + +H  DAT M  + + L   +FDRIIFNFP AG
Sbjct: 74  NLENLAKLKASTLHGVDATKMKLHPD-LRMRKFDRIIFNFPHAG 116



 Score = 90.5 bits (223), Expect(2) = 6e-41
 Identities = 49/109 (44%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
 Frame = -2

Query: 521 FQFPSGWFIPWSRRRARKKQLKWNRALVRGFMAQAKELLQNEGEIHITHKTSAIYYEWNL 342
           F FP   F     +    K ++ +R LVRGF   AK +L+ +GEIH+ HKT+A +  WN+
Sbjct: 110 FNFPHAGF---HGKEDNIKLIEKHRNLVRGFFRNAKSMLRADGEIHVNHKTTAPFCHWNI 166

Query: 341 ENLARHNGLRLIEDVQFSLTDYPGYNNKSGFGG--DNNFHCYPSRTYKF 201
           E LAR N L LIE V+F + DYPGYNNK G     D  F      T+KF
Sbjct: 167 EELARRNSLVLIERVEFKIEDYPGYNNKRGDSNRCDEPFPLGECSTFKF 215


>ref|XP_002317613.1| predicted protein [Populus trichocarpa] gi|222860678|gb|EEE98225.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  107 bits (266), Expect(2) = 6e-41
 Identities = 55/118 (46%), Positives = 79/118 (66%)
 Frame = -3

Query: 850 DSILQKKAVPKPPEQKNIWIKHYCSSHKILLVGEGDFSFSACLANAFSSGSNMVATSLDS 671
           +S L+   +    E+K  WIKHY S+ K+LLVG+GDFSF+ CLA AF S +N+VATSL S
Sbjct: 5   ESHLEMLNIDDNKEEK--WIKHYSSTQKMLLVGDGDFSFAVCLAEAFGSATNIVATSLYS 62

Query: 670 KTFLKKSYAEAMSNIKDLKSRGCTLIHNFDATAMWENWNLLNHSRFDRIIFNFPLAGL 497
           +  ++  Y+ A SN+++L+  GCT++H  +A  M  +  LL H  F RI++NFP A L
Sbjct: 63  EEMMRLKYSGAASNLRELEELGCTVMHGVNAHTM-NSHPLLTHKLFGRIVYNFPHAAL 119



 Score = 87.8 bits (216), Expect(2) = 6e-41
 Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
 Frame = -2

Query: 485 RRRARKKQLKWNRALVRGFMAQAKELLQNEGEIHITHKTSAIYYEWNLENLARHNGLRLI 306
           R  A  +Q++ +R LV+GF   A ++++  GE+H+THKT   Y +W +E LA   GL L+
Sbjct: 121 RSEANIRQIESHRRLVKGFFKSASDMMEENGEVHVTHKTPDPYSKWEIEKLAEEAGLFLV 180

Query: 305 EDVQFSLTDYPGYNNKSGFG--GDNNFHCYPSRTYKFGRN 192
           E V+F  +DYPGY NK G G   D +F      T+KFG++
Sbjct: 181 EKVKFRKSDYPGYENKRGSGSRADESFPPGNCCTFKFGKS 220


>ref|XP_002317612.1| predicted protein [Populus trichocarpa] gi|222860677|gb|EEE98224.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  108 bits (271), Expect(2) = 2e-40
 Identities = 54/100 (54%), Positives = 68/100 (68%)
 Frame = -3

Query: 796 WIKHYCSSHKILLVGEGDFSFSACLANAFSSGSNMVATSLDSKTFLKKSYAEAMSNIKDL 617
           W+KHY S HKILLVGEGDFSF+ACL  AF S  NMVATSL SK  +   Y+++ +N+ +L
Sbjct: 20  WMKHYSSCHKILLVGEGDFSFAACLGKAFGSAVNMVATSLYSKETMMLKYSKSATNLTEL 79

Query: 616 KSRGCTLIHNFDATAMWENWNLLNHSRFDRIIFNFPLAGL 497
           +  GCT+IH  D   M ++  LL    FDRI+FNFP   L
Sbjct: 80  EDLGCTIIHEVDVHNMRKH-PLLKQKLFDRIVFNFPATAL 118



 Score = 84.3 bits (207), Expect(2) = 2e-40
 Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
 Frame = -2

Query: 521 FQFPSGWFIPWSRRRARKKQLKWNRALVRGFMAQAKELLQNEGEIHITHKTSAIYYEWNL 342
           F FP+   + WS    R  Q++ ++ LV+GF+    ++L+  GE+H+THK    Y +W +
Sbjct: 111 FNFPAT-ALKWSESNVR--QIEKHQRLVKGFLRSCHDMLEENGEVHVTHKIKEPYCKWEI 167

Query: 341 ENLARHNGLRLIEDVQFSLTDYPGYNNKSGFG--GDNNFHCYPSRTYKFGR 195
           E LA   GL L+E V F  ++YPGY NK G G   D  F    S T+KF R
Sbjct: 168 EKLAEDVGLYLVEKVWFRRSEYPGYGNKRGSGARADETFPAGNSYTFKFSR 218


>sp|P0C8L4.1|Y4648_ARATH RecName: Full=Uncharacterized protein At4g26485
          Length = 209

 Score =  107 bits (267), Expect(2) = 4e-39
 Identities = 55/99 (55%), Positives = 68/99 (68%)
 Frame = -3

Query: 796 WIKHYCSSHKILLVGEGDFSFSACLANAFSSGSNMVATSLDSKTFLKKSYAEAMSNIKDL 617
           WI+HY S+HKILLVGEG+FSFS CLA+AF S  N+ ATSLDS+  L   Y +A+ NI  L
Sbjct: 7   WIRHYSSTHKILLVGEGNFSFSLCLASAFGSAMNITATSLDSEDELSIKYMDAVDNINIL 66

Query: 616 KSRGCTLIHNFDATAMWENWNLLNHSRFDRIIFNFPLAG 500
           K  GC + H  D   M  + N L+  R+DRI+FNFP AG
Sbjct: 67  KRYGCDIQHEVDVHTMSFD-NSLSLQRYDRIVFNFPHAG 104



 Score = 81.3 bits (199), Expect(2) = 4e-39
 Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
 Frame = -2

Query: 482 RRARKKQLKWNRALVRGFMAQAKELLQNEGEIHITHKTSAIYYEWNLENLARHNGLRLIE 303
           R    + ++ ++ LVRGF+  AKE+L+ +GEIHITHKT+  + +W ++ L +  GL+L++
Sbjct: 110 RELSSRAIESHKELVRGFLENAKEMLEEDGEIHITHKTTYPFSDWGIKKLGKGEGLKLLK 169

Query: 302 DVQFSLTDYPGYNNKSGFGG---DNNFHCYPSRTYKF 201
             +F L+ YPGY  K G GG   D+ F      TY F
Sbjct: 170 KSKFELSHYPGYITKRGSGGRRSDDYFPVGECSTYMF 206


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