BLASTX nr result

ID: Coptis24_contig00019306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019306
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN73052.2| mini-chromosome maintenance protein MCM6 [Pisum s...   231   5e-59
ref|XP_003534851.1| PREDICTED: DNA replication licensing factor ...   231   6e-59
ref|XP_003635008.1| PREDICTED: DNA replication licensing factor ...   230   8e-59
ref|XP_003546381.1| PREDICTED: maternal DNA replication licensin...   230   8e-59
emb|CBI29412.3| unnamed protein product [Vitis vinifera]              230   8e-59

>gb|AAN73052.2| mini-chromosome maintenance protein MCM6 [Pisum sativum]
          Length = 827

 Score =  231 bits (589), Expect = 5e-59
 Identities = 113/132 (85%), Positives = 120/132 (90%)
 Frame = +1

Query: 1   QQFKYTEPIICVNATCSERNQWVLLRQDSKFADWQRVRMQETSKEIPPGSLPRSLDVILR 180
           QQFKYTEP IC NATC+ R +W LLRQ+SKF DWQRVRMQETSKEIP GSLPRSLDVILR
Sbjct: 166 QQFKYTEPTICPNATCNNRTRWALLRQESKFTDWQRVRMQETSKEIPAGSLPRSLDVILR 225

Query: 181 HEIVEQARAGDTVIFTGTLVVIPDIMALASPGERAECRRERSQRPNSSGGNEGVRGLRAL 360
           HEIVE ARAGDTVIFTGT++VIPDI+ALASPGER+ECRRE SQR  SS GNEGVRGLRAL
Sbjct: 226 HEIVEHARAGDTVIFTGTVIVIPDILALASPGERSECRREASQRKGSSSGNEGVRGLRAL 285

Query: 361 GVRDLSYRLAFI 396
           GVRDLSYRLAFI
Sbjct: 286 GVRDLSYRLAFI 297


>ref|XP_003534851.1| PREDICTED: DNA replication licensing factor MCM6 [Glycine max]
          Length = 863

 Score =  231 bits (588), Expect = 6e-59
 Identities = 113/132 (85%), Positives = 121/132 (91%)
 Frame = +1

Query: 1   QQFKYTEPIICVNATCSERNQWVLLRQDSKFADWQRVRMQETSKEIPPGSLPRSLDVILR 180
           QQFKYTEP IC NATCS R +WVLLRQ+SKFADWQRVRMQETSKEIP GSLPRSLDVILR
Sbjct: 167 QQFKYTEPTICTNATCSNRTRWVLLRQESKFADWQRVRMQETSKEIPAGSLPRSLDVILR 226

Query: 181 HEIVEQARAGDTVIFTGTLVVIPDIMALASPGERAECRRERSQRPNSSGGNEGVRGLRAL 360
           HEIVEQARAGDTVIFTGT+V IPDIMALASPGER+ECRR+ SQR  S+ GNEGV GL+AL
Sbjct: 227 HEIVEQARAGDTVIFTGTVVAIPDIMALASPGERSECRRDASQRRGSTAGNEGVSGLKAL 286

Query: 361 GVRDLSYRLAFI 396
           GVRDL+YRLAFI
Sbjct: 287 GVRDLNYRLAFI 298


>ref|XP_003635008.1| PREDICTED: DNA replication licensing factor MCM6 [Vitis vinifera]
          Length = 812

 Score =  230 bits (587), Expect = 8e-59
 Identities = 112/132 (84%), Positives = 123/132 (93%)
 Frame = +1

Query: 1   QQFKYTEPIICVNATCSERNQWVLLRQDSKFADWQRVRMQETSKEIPPGSLPRSLDVILR 180
           QQFKYTEP+IC+NATC+ R +W L+RQ+SKFADWQRVRMQETSKEIP GSLPRSLDVILR
Sbjct: 167 QQFKYTEPVICMNATCANRTKWALVRQESKFADWQRVRMQETSKEIPAGSLPRSLDVILR 226

Query: 181 HEIVEQARAGDTVIFTGTLVVIPDIMALASPGERAECRRERSQRPNSSGGNEGVRGLRAL 360
           HEIVEQARAGDTVIFTGT+VVIPDI ALASPGERAECRR+  QR NS+ G++GVRGLRAL
Sbjct: 227 HEIVEQARAGDTVIFTGTVVVIPDISALASPGERAECRRDAPQRKNSAVGHDGVRGLRAL 286

Query: 361 GVRDLSYRLAFI 396
           GVRDLSYRLAFI
Sbjct: 287 GVRDLSYRLAFI 298


>ref|XP_003546381.1| PREDICTED: maternal DNA replication licensing factor mcm6-like
           [Glycine max]
          Length = 831

 Score =  230 bits (587), Expect = 8e-59
 Identities = 112/132 (84%), Positives = 121/132 (91%)
 Frame = +1

Query: 1   QQFKYTEPIICVNATCSERNQWVLLRQDSKFADWQRVRMQETSKEIPPGSLPRSLDVILR 180
           QQFKYTEP IC NATCS R +WVLLRQ+SKFADWQRVRMQETSKEIP GSLPRSLD+ILR
Sbjct: 166 QQFKYTEPTICANATCSNRTRWVLLRQESKFADWQRVRMQETSKEIPAGSLPRSLDIILR 225

Query: 181 HEIVEQARAGDTVIFTGTLVVIPDIMALASPGERAECRRERSQRPNSSGGNEGVRGLRAL 360
           HEIVE ARAGDTVIFTGT+VVIPDIMALASPGER+ECRR+ SQR  S+ GNEGV GL+AL
Sbjct: 226 HEIVEHARAGDTVIFTGTVVVIPDIMALASPGERSECRRDASQRKGSTAGNEGVSGLKAL 285

Query: 361 GVRDLSYRLAFI 396
           GVRDL+YRLAFI
Sbjct: 286 GVRDLNYRLAFI 297


>emb|CBI29412.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  230 bits (587), Expect = 8e-59
 Identities = 112/132 (84%), Positives = 123/132 (93%)
 Frame = +1

Query: 1   QQFKYTEPIICVNATCSERNQWVLLRQDSKFADWQRVRMQETSKEIPPGSLPRSLDVILR 180
           QQFKYTEP+IC+NATC+ R +W L+RQ+SKFADWQRVRMQETSKEIP GSLPRSLDVILR
Sbjct: 167 QQFKYTEPVICMNATCANRTKWALVRQESKFADWQRVRMQETSKEIPAGSLPRSLDVILR 226

Query: 181 HEIVEQARAGDTVIFTGTLVVIPDIMALASPGERAECRRERSQRPNSSGGNEGVRGLRAL 360
           HEIVEQARAGDTVIFTGT+VVIPDI ALASPGERAECRR+  QR NS+ G++GVRGLRAL
Sbjct: 227 HEIVEQARAGDTVIFTGTVVVIPDISALASPGERAECRRDAPQRKNSAVGHDGVRGLRAL 286

Query: 361 GVRDLSYRLAFI 396
           GVRDLSYRLAFI
Sbjct: 287 GVRDLSYRLAFI 298


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