BLASTX nr result

ID: Coptis24_contig00019304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019304
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144574.1| PREDICTED: uncharacterized protein LOC101220...   212   5e-53
ref|XP_002281700.1| PREDICTED: uncharacterized protein LOC100243...   192   5e-47
ref|XP_002517689.1| conserved hypothetical protein [Ricinus comm...   188   6e-46
ref|XP_002522706.1| conserved hypothetical protein [Ricinus comm...   186   2e-45
ref|XP_002869593.1| hypothetical protein ARALYDRAFT_492129 [Arab...   175   5e-42

>ref|XP_004144574.1| PREDICTED: uncharacterized protein LOC101220368 [Cucumis sativus]
          Length = 228

 Score =  212 bits (539), Expect = 5e-53
 Identities = 104/175 (59%), Positives = 130/175 (74%)
 Frame = +3

Query: 3   DSTHRELVSIEKKNKRIWSTHDWRKKVNSFTQLFTEFQTLGYLNNQSKVVCVSAGPGQEV 182
           DST RELVSI+KKNKR+WS++DW+KK++SF   F   Q LG L+N +KV+CVSAG G EV
Sbjct: 54  DSTPRELVSIDKKNKRLWSSNDWKKKLSSFIHFFQSIQDLGLLHNHTKVICVSAGAGHEV 113

Query: 183 MALSEIGLIDVTGIELIDSPPLVSRADPHNLPFFDGVFDFGFTCRFAQALFPFRFVSELE 362
           MALS++G+ DVTG+ELIDSPPLVSRADPHNLPFFD VFD  FT   A+ALFP RFVSE+E
Sbjct: 114 MALSQMGVHDVTGVELIDSPPLVSRADPHNLPFFDHVFDLAFTAHLAEALFPSRFVSEME 173

Query: 363 RTVRXXXXXXXXXXXXXXXXFSDVIKLFRQSSFVSANNVSLFGLKMTRIIMRRVT 527
           R VR                  +++ LF +S FV++ NV+L GLKMTRI+M+R +
Sbjct: 174 RAVRPDGVCVIVVEECGDYEVKEIVGLFMKSRFVNSINVTLTGLKMTRILMKRTS 228


>ref|XP_002281700.1| PREDICTED: uncharacterized protein LOC100243023 isoform 1 [Vitis
           vinifera]
          Length = 231

 Score =  192 bits (487), Expect = 5e-47
 Identities = 94/176 (53%), Positives = 120/176 (68%)
 Frame = +3

Query: 3   DSTHRELVSIEKKNKRIWSTHDWRKKVNSFTQLFTEFQTLGYLNNQSKVVCVSAGPGQEV 182
           DS+ R+ V   KKN+R+WST DW+KKVNS+ Q F   +    L+N SKV+CVSAG G EV
Sbjct: 55  DSSRRDYVPFSKKNERLWSTRDWKKKVNSYAQFFRSLRDQRLLSNHSKVLCVSAGAGHEV 114

Query: 183 MALSEIGLIDVTGIELIDSPPLVSRADPHNLPFFDGVFDFGFTCRFAQALFPFRFVSELE 362
            A+SE+G  DVTG+EL++SPPLVSRADPHNLPFF G FD  F+    +ALFP RFV+E+E
Sbjct: 115 AAVSEVGARDVTGVELVESPPLVSRADPHNLPFFYGAFDLVFSAHLDEALFPARFVAEME 174

Query: 363 RTVRXXXXXXXXXXXXXXXXFSDVIKLFRQSSFVSANNVSLFGLKMTRIIMRRVTS 530
           RTVR                   ++++F+ S FVSA NV+L GL+MT+IIMR   S
Sbjct: 175 RTVRVRGVCVVVVEECGGDEMRGILRMFKHSVFVSAKNVTLIGLRMTQIIMRNRNS 230


>ref|XP_002517689.1| conserved hypothetical protein [Ricinus communis]
           gi|223543321|gb|EEF44853.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 237

 Score =  188 bits (478), Expect = 6e-46
 Identities = 90/169 (53%), Positives = 120/169 (71%)
 Frame = +3

Query: 12  HRELVSIEKKNKRIWSTHDWRKKVNSFTQLFTEFQTLGYLNNQSKVVCVSAGPGQEVMAL 191
           HR  + + KKN+R+WS++ W  +V S+T  F+  Q L  L+N SKV+CVSAG G EVMAL
Sbjct: 60  HRPHLPLSKKNQRLWSSNAWLSQVASYTTFFSHLQNLHLLHNNSKVLCVSAGAGHEVMAL 119

Query: 192 SEIGLIDVTGIELIDSPPLVSRADPHNLPFFDGVFDFGFTCRFAQALFPFRFVSELERTV 371
           ++IG++D+TG+EL+DS PLV +ADP+NLPFFDGVFD GF+    +ALFP RFV E+ERTV
Sbjct: 120 NKIGVVDITGVELVDSLPLVRKADPNNLPFFDGVFDLGFSAHLMEALFPVRFVGEMERTV 179

Query: 372 RXXXXXXXXXXXXXXXXFSDVIKLFRQSSFVSANNVSLFGLKMTRIIMR 518
           R                 S++++LFR+S FV A NV+L G KMTRII+R
Sbjct: 180 RNGGVCIVVVGQCDDNGVSEIVRLFRKSKFVGAKNVTLIGRKMTRIIVR 228


>ref|XP_002522706.1| conserved hypothetical protein [Ricinus communis]
           gi|223538056|gb|EEF39668.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 236

 Score =  186 bits (473), Expect = 2e-45
 Identities = 90/169 (53%), Positives = 119/169 (70%)
 Frame = +3

Query: 12  HRELVSIEKKNKRIWSTHDWRKKVNSFTQLFTEFQTLGYLNNQSKVVCVSAGPGQEVMAL 191
           HR L+ + KKN+R+WS++ W  +V S+T  F+  Q+L  L+N SKV+CVSAG G EVMAL
Sbjct: 60  HRPLLPLSKKNQRLWSSNAWLSQVASYTTFFSHLQSLHLLHNNSKVLCVSAGAGHEVMAL 119

Query: 192 SEIGLIDVTGIELIDSPPLVSRADPHNLPFFDGVFDFGFTCRFAQALFPFRFVSELERTV 371
           +++G+ DV G+EL+DS PLV +ADP+NLPFFDGVFD GF+    +ALFP RFV E+ERTV
Sbjct: 120 NKMGVFDVAGVELVDSLPLVRKADPNNLPFFDGVFDLGFSAHLMEALFPVRFVGEIERTV 179

Query: 372 RXXXXXXXXXXXXXXXXFSDVIKLFRQSSFVSANNVSLFGLKMTRIIMR 518
           R                 S ++ LFR+S FV A NV+L G+KMTRII+R
Sbjct: 180 RNGGVCVVVVGECSDNEVSKIVGLFRKSKFVGAENVTLIGMKMTRIIVR 228


>ref|XP_002869593.1| hypothetical protein ARALYDRAFT_492129 [Arabidopsis lyrata subsp.
           lyrata] gi|297315429|gb|EFH45852.1| hypothetical protein
           ARALYDRAFT_492129 [Arabidopsis lyrata subsp. lyrata]
          Length = 231

 Score =  175 bits (444), Expect = 5e-42
 Identities = 87/177 (49%), Positives = 113/177 (63%)
 Frame = +3

Query: 3   DSTHRELVSIEKKNKRIWSTHDWRKKVNSFTQLFTEFQTLGYLNNQSKVVCVSAGPGQEV 182
           DS+ R+ + + KKN RIWS+  W+ +++SF+  F  F+ LG+L   +K +C+SAG G   
Sbjct: 54  DSSPRQHLPLPKKNARIWSSKAWKSRLSSFSNYFLRFRDLGFLQKHTKALCLSAGAGHAP 113

Query: 183 MALSEIGLIDVTGIELIDSPPLVSRADPHNLPFFDGVFDFGFTCRFAQALFPFRFVSELE 362
           MALS IGL DVT +EL+DS PLV RADPHNLPFFDGVFDF FT   A+ALFP+RFV E+E
Sbjct: 114 MALSNIGLADVTAVELVDSIPLVKRADPHNLPFFDGVFDFAFTAHLAEALFPWRFVEEME 173

Query: 363 RTVRXXXXXXXXXXXXXXXXFSDVIKLFRQSSFVSANNVSLFGLKMTRIIMRRVTSP 533
           RTVR                  D+ +LF +S  V   NV+L G K T I+ +   SP
Sbjct: 174 RTVRRGGFCVVAVDECGGDDVRDIARLFHKSKVVDVANVTLEGSKRTSILFKVQDSP 230


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