BLASTX nr result

ID: Coptis24_contig00019298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019298
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521747.1| conserved hypothetical protein [Ricinus comm...   197   1e-48
ref|XP_002333769.1| predicted protein [Populus trichocarpa] gi|2...   196   4e-48
ref|XP_003522666.1| PREDICTED: putative peptidyl-tRNA hydrolase ...   191   8e-47
ref|XP_004138768.1| PREDICTED: putative peptidyl-tRNA hydrolase ...   191   1e-46
ref|XP_003526457.1| PREDICTED: putative peptidyl-tRNA hydrolase ...   190   2e-46

>ref|XP_002521747.1| conserved hypothetical protein [Ricinus communis]
           gi|223538960|gb|EEF40557.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 135

 Score =  197 bits (502), Expect = 1e-48
 Identities = 91/119 (76%), Positives = 106/119 (89%)
 Frame = -1

Query: 563 ENDVEEREKIVEDVIVQYLVLRRDLIDSWPLGSVVTQGCHASVAAIWGNKDDGHTIDYCS 384
           E++  + E   EDV+VQY+VLRRDLID+WP+GSVVTQGCHASV+AIWGNKDD HT+ YCS
Sbjct: 7   ESEAAKGEIPSEDVLVQYVVLRRDLIDAWPMGSVVTQGCHASVSAIWGNKDDPHTLQYCS 66

Query: 383 RENIDSMHKVTLEVKGEPQLLNLSQKLAAGDIAHKLWIEQPENLPTCLATKPYPKTTVS 207
            ENIDSMHKVTLEVKGE Q+LNL++KL AG I HKLWIEQPEN+PTCLATKPYPK+TV+
Sbjct: 67  PENIDSMHKVTLEVKGEVQMLNLAEKLTAGGIVHKLWIEQPENIPTCLATKPYPKSTVA 125


>ref|XP_002333769.1| predicted protein [Populus trichocarpa]
           gi|224142079|ref|XP_002324386.1| predicted protein
           [Populus trichocarpa] gi|222838441|gb|EEE76806.1|
           predicted protein [Populus trichocarpa]
           gi|222865820|gb|EEF02951.1| predicted protein [Populus
           trichocarpa]
          Length = 140

 Score =  196 bits (497), Expect = 4e-48
 Identities = 93/133 (69%), Positives = 114/133 (85%)
 Frame = -1

Query: 605 STSSIEPSILSIKPENDVEEREKIVEDVIVQYLVLRRDLIDSWPLGSVVTQGCHASVAAI 426
           ST+  EP+     P+N+ E++    ++V+VQY+VLRRDLID+WP+GSVVTQGCHASV+AI
Sbjct: 4   STTDSEPN-----PQNE-EKKAGNSDEVLVQYVVLRRDLIDTWPMGSVVTQGCHASVSAI 57

Query: 425 WGNKDDGHTIDYCSRENIDSMHKVTLEVKGEPQLLNLSQKLAAGDIAHKLWIEQPENLPT 246
           W +K+D HT+ YCS ENIDSMHKVTLEVKGEPQ+LNLS+KL AG IAHKLWIEQPEN+PT
Sbjct: 58  WSHKEDPHTLQYCSPENIDSMHKVTLEVKGEPQILNLSEKLKAGGIAHKLWIEQPENIPT 117

Query: 245 CLATKPYPKTTVS 207
           CLATKPYPK+ V+
Sbjct: 118 CLATKPYPKSVVA 130


>ref|XP_003522666.1| PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1-like [Glycine
           max]
          Length = 143

 Score =  191 bits (486), Expect = 8e-47
 Identities = 92/135 (68%), Positives = 109/135 (80%)
 Frame = -1

Query: 608 MSTSSIEPSILSIKPENDVEEREKIVEDVIVQYLVLRRDLIDSWPLGSVVTQGCHASVAA 429
           MS S+      +I   ND   + +   DV+VQY+VLRRDLID+WPLGSVVTQGCHASV+A
Sbjct: 1   MSQSAATADPNAIATTNDAPSQPENA-DVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSA 59

Query: 428 IWGNKDDGHTIDYCSRENIDSMHKVTLEVKGEPQLLNLSQKLAAGDIAHKLWIEQPENLP 249
           +W NK+D  T+DYCS + IDSMHKVTLEVKGEPQ+ NLS+KL AG I HKLWIEQPEN+P
Sbjct: 60  VWSNKEDPFTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTAGGIIHKLWIEQPENIP 119

Query: 248 TCLATKPYPKTTVSS 204
           TCLATKPYPK++VSS
Sbjct: 120 TCLATKPYPKSSVSS 134


>ref|XP_004138768.1| PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1-like [Cucumis
           sativus]
          Length = 192

 Score =  191 bits (484), Expect = 1e-46
 Identities = 91/132 (68%), Positives = 109/132 (82%)
 Frame = -1

Query: 602 TSSIEPSILSIKPENDVEEREKIVEDVIVQYLVLRRDLIDSWPLGSVVTQGCHASVAAIW 423
           + S+E + +S  P++   + E+   DV++QY+VLRRDLIDSWPLGSVVTQGCHASV+AIW
Sbjct: 52  SQSVETNSVST-PDDAGAKAEETPADVLIQYVVLRRDLIDSWPLGSVVTQGCHASVSAIW 110

Query: 422 GNKDDGHTIDYCSRENIDSMHKVTLEVKGEPQLLNLSQKLAAGDIAHKLWIEQPENLPTC 243
            NKDD HT DYC+  NIDSMHKVTLEVKGE Q++NLS+KL A  I HKLWIEQPEN+PTC
Sbjct: 111 LNKDDPHTSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTC 170

Query: 242 LATKPYPKTTVS 207
           LATKPYPK+ VS
Sbjct: 171 LATKPYPKSVVS 182


>ref|XP_003526457.1| PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1-like [Glycine
           max]
          Length = 167

 Score =  190 bits (482), Expect = 2e-46
 Identities = 87/108 (80%), Positives = 98/108 (90%)
 Frame = -1

Query: 527 DVIVQYLVLRRDLIDSWPLGSVVTQGCHASVAAIWGNKDDGHTIDYCSRENIDSMHKVTL 348
           DV+VQY+VLRRDLID+WPLGSVVTQGCHASV+A+W NKDD  T+DYCS + IDSMHKVTL
Sbjct: 51  DVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSAVWFNKDDPFTVDYCSPDKIDSMHKVTL 110

Query: 347 EVKGEPQLLNLSQKLAAGDIAHKLWIEQPENLPTCLATKPYPKTTVSS 204
           EVKGEPQ+ NLS+KL AG I HKLWIEQPEN+PTCLATKPYPK+ VSS
Sbjct: 111 EVKGEPQIKNLSEKLTAGGIIHKLWIEQPENIPTCLATKPYPKSIVSS 158


Top