BLASTX nr result

ID: Coptis24_contig00019297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019297
         (1640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517711.1| GTP binding protein, putative [Ricinus commu...   108   3e-21
ref|XP_002276707.2| PREDICTED: uncharacterized protein LOC100255...   108   5e-21
emb|CBI15835.3| unnamed protein product [Vitis vinifera]              108   5e-21
ref|XP_003537334.1| PREDICTED: uncharacterized protein LOC100801...   105   3e-20
ref|XP_003552925.1| PREDICTED: uncharacterized protein LOC100799...   104   6e-20

>ref|XP_002517711.1| GTP binding protein, putative [Ricinus communis]
           gi|223543109|gb|EEF44643.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 489

 Score =  108 bits (271), Expect = 3e-21
 Identities = 53/79 (67%), Positives = 66/79 (83%)
 Frame = -3

Query: 237 VMRIDPQDISNKRLDDSIPISGTTVEKEVDPDKENEISKNAQFRAIQPSPSILSFVEDNL 58
           ++R+DP DISNKRLD+ +  +    EKE + ++  E+SKNAQFRAI+PSPSILSFVEDNL
Sbjct: 177 IIRLDPHDISNKRLDEGVVTNENPKEKEKEVEEVGEMSKNAQFRAIKPSPSILSFVEDNL 236

Query: 57  LGRRRSIELRRAGYNIDLS 1
           LGRRR IEL+RAGYNI+LS
Sbjct: 237 LGRRRLIELKRAGYNIELS 255


>ref|XP_002276707.2| PREDICTED: uncharacterized protein LOC100255308 [Vitis vinifera]
          Length = 574

 Score =  108 bits (269), Expect = 5e-21
 Identities = 55/79 (69%), Positives = 65/79 (82%)
 Frame = -3

Query: 237 VMRIDPQDISNKRLDDSIPISGTTVEKEVDPDKENEISKNAQFRAIQPSPSILSFVEDNL 58
           V+RIDP DI+NKRLDD I  + +  EK+ D +K   +SKNAQFRAIQPSPSIL+FVEDNL
Sbjct: 275 VIRIDPYDITNKRLDDGIVTNESIKEKDEDLEKNITMSKNAQFRAIQPSPSILAFVEDNL 334

Query: 57  LGRRRSIELRRAGYNIDLS 1
           LGRRR IELRR+GYN +LS
Sbjct: 335 LGRRRLIELRRSGYNTELS 353


>emb|CBI15835.3| unnamed protein product [Vitis vinifera]
          Length = 395

 Score =  108 bits (269), Expect = 5e-21
 Identities = 55/79 (69%), Positives = 65/79 (82%)
 Frame = -3

Query: 237 VMRIDPQDISNKRLDDSIPISGTTVEKEVDPDKENEISKNAQFRAIQPSPSILSFVEDNL 58
           V+RIDP DI+NKRLDD I  + +  EK+ D +K   +SKNAQFRAIQPSPSIL+FVEDNL
Sbjct: 71  VIRIDPYDITNKRLDDGIVTNESIKEKDEDLEKNITMSKNAQFRAIQPSPSILAFVEDNL 130

Query: 57  LGRRRSIELRRAGYNIDLS 1
           LGRRR IELRR+GYN +LS
Sbjct: 131 LGRRRLIELRRSGYNTELS 149


>ref|XP_003537334.1| PREDICTED: uncharacterized protein LOC100801850 [Glycine max]
          Length = 535

 Score =  105 bits (263), Expect = 3e-20
 Identities = 56/79 (70%), Positives = 64/79 (81%)
 Frame = -3

Query: 237 VMRIDPQDISNKRLDDSIPISGTTVEKEVDPDKENEISKNAQFRAIQPSPSILSFVEDNL 58
           V++IDP DISNKRLDD     G   EKE + +KE ++SKNAQFRAIQPSP ILSFVE NL
Sbjct: 241 VIKIDPHDISNKRLDD-----GIGKEKEKESEKEPKMSKNAQFRAIQPSPLILSFVEKNL 295

Query: 57  LGRRRSIELRRAGYNIDLS 1
           LGRRR I+L+RAGYNIDLS
Sbjct: 296 LGRRRMIDLKRAGYNIDLS 314


>ref|XP_003552925.1| PREDICTED: uncharacterized protein LOC100799694 [Glycine max]
          Length = 540

 Score =  104 bits (260), Expect = 6e-20
 Identities = 55/79 (69%), Positives = 65/79 (82%)
 Frame = -3

Query: 237 VMRIDPQDISNKRLDDSIPISGTTVEKEVDPDKENEISKNAQFRAIQPSPSILSFVEDNL 58
           V++IDP DISNKRLDD I I+    + E + +KE ++SKNAQFRAIQPSP ILSFVE NL
Sbjct: 242 VIKIDPHDISNKRLDDGIGINEEK-KNEKESEKEPKMSKNAQFRAIQPSPLILSFVEKNL 300

Query: 57  LGRRRSIELRRAGYNIDLS 1
           LGRRR I+L+RAGYNIDLS
Sbjct: 301 LGRRRMIDLKRAGYNIDLS 319


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