BLASTX nr result

ID: Coptis24_contig00019291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019291
         (1154 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548061.1| PREDICTED: probable galactose-1-phosphate ur...   292   9e-77
ref|XP_002309518.1| predicted protein [Populus trichocarpa] gi|2...   292   9e-77
ref|XP_002325837.1| predicted protein [Populus trichocarpa] gi|2...   283   6e-74
emb|CBI29939.3| unnamed protein product [Vitis vinifera]              282   1e-73
ref|XP_002281972.1| PREDICTED: probable galactose-1-phosphate ur...   281   2e-73

>ref|XP_003548061.1| PREDICTED: probable galactose-1-phosphate uridyl transferase-like
           [Glycine max]
          Length = 341

 Score =  292 bits (748), Expect = 9e-77
 Identities = 147/221 (66%), Positives = 177/221 (80%), Gaps = 2/221 (0%)
 Frame = +2

Query: 14  SPKTPELRKDTVLNKWVIFSPARAKRPSDFKSKSPVTNPNPSSKPECPFCIGHEHECAPE 193
           +P  PE+RKD V N+WVIFSPARAKRPSDFKSKSP  +PNP+   +CPFCIGHEHECAPE
Sbjct: 8   NPNNPEVRKDIVWNRWVIFSPARAKRPSDFKSKSPA-DPNPNQ--QCPFCIGHEHECAPE 64

Query: 194 IFRVNSTTNTCSNNWKIRVIENLYPALSRNLDFE--SSPKFGNLVTGFGFHDVVIESPLH 367
           IFRV     T   +WKIRVI+NLYPALSR L     S+   G+++TGFGFHDVVIE+P+H
Sbjct: 65  IFRVP----THDPDWKIRVIQNLYPALSRTLPEPQGSASTTGSVLTGFGFHDVVIETPVH 120

Query: 368 TVVLSDLDGSQVGDVLLAYKKRVQQLMLNESIQYVQVFKNHGASAGASMNHSHSQMIGLP 547
            V LSDL  SQ+G V LAY +R +QL  +ESIQYVQVFKNHGASAGASM+HSHSQM+ LP
Sbjct: 121 PVQLSDLSPSQIGKVFLAYTERTRQLASHESIQYVQVFKNHGASAGASMSHSHSQMMALP 180

Query: 548 IVPPSVSARFDSMKKCYDETGKCGLCEIRCEELLINESRHF 670
           ++PPSVSAR  SMK  +D+TGKC +CEI+C++LLI+ S +F
Sbjct: 181 VIPPSVSARLTSMKDHFDQTGKCFICEIQCKDLLIDSSTNF 221



 Score =  103 bits (256), Expect = 1e-19
 Identities = 44/67 (65%), Positives = 54/67 (80%)
 Frame = +3

Query: 903  QLNDPPYNFMIHSSPFKVDASQLPYAHWFLQIVPQLSGVGGFEIGSGCNINPVFPGDVAK 1082
            QLN+PP+N+MIH+SP     S+L Y HWF+QI+PQL G+ GFE+G+GC INPVFP D AK
Sbjct: 271  QLNNPPFNYMIHTSPLHAKGSELAYNHWFIQIIPQLIGIAGFELGTGCYINPVFPEDAAK 330

Query: 1083 VLREVDV 1103
            VLREV V
Sbjct: 331  VLREVKV 337


>ref|XP_002309518.1| predicted protein [Populus trichocarpa] gi|222855494|gb|EEE93041.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  292 bits (748), Expect = 9e-77
 Identities = 140/222 (63%), Positives = 179/222 (80%), Gaps = 5/222 (2%)
 Frame = +2

Query: 20  KTPELRKDTVLNKWVIFSPARAKRPSDFKSKSPVTNPNPSSKPECPFCIGHEHECAPEIF 199
           ++PELR D V N+WVIFSPARAKRP+DFKSK+P  NPNP++   CPFCIG+EHECAPEIF
Sbjct: 10  RSPELRHDPVTNRWVIFSPARAKRPTDFKSKNP-QNPNPNNNSLCPFCIGNEHECAPEIF 68

Query: 200 RVNSTTNTCSNNWKIRVIENLYPALSRNLDFESSPKFG-----NLVTGFGFHDVVIESPL 364
           RV    N    NWK+RVIENLYPALSRNL+     K G      ++ GFGFHDVVIE+P+
Sbjct: 69  RVPPDLN--DPNWKLRVIENLYPALSRNLECPCEEKQGMEFPGRVIGGFGFHDVVIENPV 126

Query: 365 HTVVLSDLDGSQVGDVLLAYKKRVQQLMLNESIQYVQVFKNHGASAGASMNHSHSQMIGL 544
           H+V LSD++  ++G+V LA+KKR+QQ+M  +SI+YVQVFKNHGASAGASM+HSHSQ++ L
Sbjct: 127 HSVQLSDMEPREIGEVFLAHKKRIQQIMSVQSIKYVQVFKNHGASAGASMSHSHSQILAL 186

Query: 545 PIVPPSVSARFDSMKKCYDETGKCGLCEIRCEELLINESRHF 670
           P++P SVSAR + MK+ +++TGKC LCE+R +EL+I+ES HF
Sbjct: 187 PVIPSSVSARLEGMKEYFEKTGKCSLCEVRAKELVIDESSHF 228



 Score =  104 bits (259), Expect = 5e-20
 Identities = 47/69 (68%), Positives = 57/69 (82%)
 Frame = +3

Query: 897  SRQLNDPPYNFMIHSSPFKVDASQLPYAHWFLQIVPQLSGVGGFEIGSGCNINPVFPGDV 1076
            S QLN+PP+NFMI +SP ++  S+  Y HWFLQIVPQLSGVGGFEIG+GC INPV P D 
Sbjct: 276  SLQLNNPPFNFMIQTSPVQIKESESCYTHWFLQIVPQLSGVGGFEIGTGCYINPVLPEDA 335

Query: 1077 AKVLREVDV 1103
            AKV+REV++
Sbjct: 336  AKVMREVNL 344


>ref|XP_002325837.1| predicted protein [Populus trichocarpa] gi|222862712|gb|EEF00219.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  283 bits (724), Expect = 6e-74
 Identities = 140/222 (63%), Positives = 171/222 (77%), Gaps = 5/222 (2%)
 Frame = +2

Query: 20  KTPELRKDTVLNKWVIFSPARAKRPSDFKSKSPVTNPNPSSKPECPFCIGHEHECAPEIF 199
           + PELR D V N+WVIFSPARAKRP+D KSKSP  N NP+    CPFCIG+EHECAPEIF
Sbjct: 10  RRPELRHDPVTNRWVIFSPARAKRPTDLKSKSP-QNSNPNDNSSCPFCIGNEHECAPEIF 68

Query: 200 RVNSTTNTCSNNWKIRVIENLYPALSRNLDFESSPKF-----GNLVTGFGFHDVVIESPL 364
           RV S  N     WK+RVIENLYPAL+RNL+     K      G  + GFGFHDVVIE+P+
Sbjct: 69  RVPSDPN-----WKLRVIENLYPALNRNLEGPCDEKQDMGVPGLAMGGFGFHDVVIENPV 123

Query: 365 HTVVLSDLDGSQVGDVLLAYKKRVQQLMLNESIQYVQVFKNHGASAGASMNHSHSQMIGL 544
           H+V L D++   +G VLLAYKKR+QQ+   ESI+YVQVFKNHGASAGASM+HSHSQ++ L
Sbjct: 124 HSVHLCDMEARDIGQVLLAYKKRIQQIATVESIKYVQVFKNHGASAGASMSHSHSQILAL 183

Query: 545 PIVPPSVSARFDSMKKCYDETGKCGLCEIRCEELLINESRHF 670
           PI+P SVSARF+ M + +++TGKC LCE++ +ELLI+ES HF
Sbjct: 184 PIIPSSVSARFEGMNEYFEKTGKCSLCEVQAKELLIDESTHF 225



 Score =  109 bits (272), Expect = 1e-21
 Identities = 49/69 (71%), Positives = 60/69 (86%)
 Frame = +3

Query: 897  SRQLNDPPYNFMIHSSPFKVDASQLPYAHWFLQIVPQLSGVGGFEIGSGCNINPVFPGDV 1076
            S QLN+PP+NFMI +SP +V  S+L Y+HWFLQI+PQLSGVGGFEIG+GC INPVFP D 
Sbjct: 273  SLQLNNPPFNFMIQTSPLQVKESELFYSHWFLQIIPQLSGVGGFEIGTGCYINPVFPEDA 332

Query: 1077 AKVLREVDV 1103
            AKV+REV++
Sbjct: 333  AKVMREVNL 341


>emb|CBI29939.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  282 bits (721), Expect = 1e-73
 Identities = 138/223 (61%), Positives = 175/223 (78%)
 Frame = +2

Query: 2   KKMTSPKTPELRKDTVLNKWVIFSPARAKRPSDFKSKSPVTNPNPSSKPECPFCIGHEHE 181
           K   + + PE+RKDTV N+WV+FSPARA+RPSDFKSK    NPN  ++ ECPFC GHEHE
Sbjct: 23  KTKMAGRDPEIRKDTVTNRWVVFSPARARRPSDFKSKDSA-NPN-HTQSECPFCSGHEHE 80

Query: 182 CAPEIFRVNSTTNTCSNNWKIRVIENLYPALSRNLDFESSPKFGNLVTGFGFHDVVIESP 361
           CAPEIFR    +     +WKIRVI+NLYPALSR++    S   G ++TGFGFHDVVIESP
Sbjct: 81  CAPEIFRFPPDSTV---DWKIRVIQNLYPALSRDVQLNPSSD-GMVLTGFGFHDVVIESP 136

Query: 362 LHTVVLSDLDGSQVGDVLLAYKKRVQQLMLNESIQYVQVFKNHGASAGASMNHSHSQMIG 541
           +H V LSDL  S+V +VLLAYKKR+ QL  ++S++Y+QVFKNHGASAGASM+HSHSQ++ 
Sbjct: 137 VHAVHLSDLSPSEVAEVLLAYKKRIHQLSFHQSVKYIQVFKNHGASAGASMSHSHSQIMA 196

Query: 542 LPIVPPSVSARFDSMKKCYDETGKCGLCEIRCEELLINESRHF 670
           LPIVPP+VS+R D MK  ++ETGKC +CE+  ++LLI+ES H+
Sbjct: 197 LPIVPPTVSSRLDCMKGYFEETGKCSVCEMSVKDLLIDESTHY 239



 Score =  109 bits (273), Expect = 1e-21
 Identities = 49/69 (71%), Positives = 58/69 (84%)
 Frame = +3

Query: 897  SRQLNDPPYNFMIHSSPFKVDASQLPYAHWFLQIVPQLSGVGGFEIGSGCNINPVFPGDV 1076
            S QLN PP+NFMIH+SP +V  S L Y HWFLQIVPQL+G+GGFE+G+GC INPVFP D 
Sbjct: 287  SLQLNSPPFNFMIHTSPLQVTDSLLSYTHWFLQIVPQLTGIGGFELGTGCYINPVFPEDA 346

Query: 1077 AKVLREVDV 1103
            AKVLREV++
Sbjct: 347  AKVLREVNL 355


>ref|XP_002281972.1| PREDICTED: probable galactose-1-phosphate uridyl transferase [Vitis
           vinifera] gi|147861286|emb|CAN81898.1| hypothetical
           protein VITISV_009054 [Vitis vinifera]
          Length = 332

 Score =  281 bits (720), Expect = 2e-73
 Identities = 137/217 (63%), Positives = 173/217 (79%)
 Frame = +2

Query: 20  KTPELRKDTVLNKWVIFSPARAKRPSDFKSKSPVTNPNPSSKPECPFCIGHEHECAPEIF 199
           + PE+RKDTV N+WV+FSPARA+RPSDFKSK    NPN  ++ ECPFC GHEHECAPEIF
Sbjct: 4   RDPEIRKDTVTNRWVVFSPARARRPSDFKSKDSA-NPN-HTQSECPFCSGHEHECAPEIF 61

Query: 200 RVNSTTNTCSNNWKIRVIENLYPALSRNLDFESSPKFGNLVTGFGFHDVVIESPLHTVVL 379
           R    +     +WKIRVI+NLYPALSR++    S   G ++TGFGFHDVVIESP+H V L
Sbjct: 62  RFPPDSTV---DWKIRVIQNLYPALSRDVQLNPSSD-GMVLTGFGFHDVVIESPVHAVHL 117

Query: 380 SDLDGSQVGDVLLAYKKRVQQLMLNESIQYVQVFKNHGASAGASMNHSHSQMIGLPIVPP 559
           SDL  S+V +VLLAYKKR+ QL  ++S++Y+QVFKNHGASAGASM+HSHSQ++ LPIVPP
Sbjct: 118 SDLSPSEVAEVLLAYKKRIHQLSFHQSVKYIQVFKNHGASAGASMSHSHSQIMALPIVPP 177

Query: 560 SVSARFDSMKKCYDETGKCGLCEIRCEELLINESRHF 670
           +VS+R D MK  ++ETGKC +CE+  ++LLI+ES H+
Sbjct: 178 TVSSRLDCMKGYFEETGKCSVCEMSVKDLLIDESTHY 214



 Score =  109 bits (273), Expect = 1e-21
 Identities = 49/69 (71%), Positives = 58/69 (84%)
 Frame = +3

Query: 897  SRQLNDPPYNFMIHSSPFKVDASQLPYAHWFLQIVPQLSGVGGFEIGSGCNINPVFPGDV 1076
            S QLN PP+NFMIH+SP +V  S L Y HWFLQIVPQL+G+GGFE+G+GC INPVFP D 
Sbjct: 262  SLQLNSPPFNFMIHTSPLQVTDSLLSYTHWFLQIVPQLTGIGGFELGTGCYINPVFPEDA 321

Query: 1077 AKVLREVDV 1103
            AKVLREV++
Sbjct: 322  AKVLREVNL 330


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