BLASTX nr result

ID: Coptis24_contig00019289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019289
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279766.1| PREDICTED: UPF0497 membrane protein 16 [Viti...   232   3e-59
emb|CAN63416.1| hypothetical protein VITISV_007688 [Vitis vinifera]   230   1e-58
ref|XP_002315238.1| predicted protein [Populus trichocarpa] gi|3...   213   2e-53
ref|XP_002529903.1| conserved hypothetical protein [Ricinus comm...   200   1e-49
gb|AFK35918.1| unknown [Medicago truncatula]                          197   9e-49

>ref|XP_002279766.1| PREDICTED: UPF0497 membrane protein 16 [Vitis vinifera]
           gi|226713187|sp|A7P0P3.1|CSPL3_VITVI RecName:
           Full=CASP-like protein VIT_19s0090g00570
           gi|297737447|emb|CBI26648.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score =  232 bits (592), Expect = 3e-59
 Identities = 113/183 (61%), Positives = 137/183 (74%)
 Frame = +3

Query: 24  MRSFTENQATLANHHNNLHILDSILRLSMIPLAAASIWLTVTNKEESSAYGKLEFSNFIG 203
           M +  E     + H   L ++D  LRL +IPL+ A+IWLTVTN++++S YGKLEFSN  G
Sbjct: 1   MSNLAETAPISSAHIPTLKLIDCSLRLCVIPLSVATIWLTVTNQQDNSIYGKLEFSNLTG 60

Query: 204 LKYMICINAISAGYALVALVSSWLRCLVTKAWVFFVSDQVVTYLMVTSGAAVVEILYLAY 383
           LKYM+CI+ ISAGYALVA+V+SW+RCLV KAW+FFVSDQ++ YLMVTSGAAV+EILYLAY
Sbjct: 61  LKYMVCISGISAGYALVAVVASWVRCLVNKAWLFFVSDQIMAYLMVTSGAAVLEILYLAY 120

Query: 384 NGDRDVSWSEACSSFGRFCSRXXXXXXXXXXXXTCFFFLSLISAYRFFSKFEPPVPRKGV 563
            GDR VSWSEACSS+GRFCSR             CF  L++ISAYR FS FEPPV  K V
Sbjct: 121 KGDRGVSWSEACSSYGRFCSRVNLALALHALALCCFLVLAVISAYRVFSMFEPPVSSKEV 180

Query: 564 HED 572
            E+
Sbjct: 181 EEE 183


>emb|CAN63416.1| hypothetical protein VITISV_007688 [Vitis vinifera]
          Length = 186

 Score =  230 bits (587), Expect = 1e-58
 Identities = 112/183 (61%), Positives = 136/183 (74%)
 Frame = +3

Query: 24  MRSFTENQATLANHHNNLHILDSILRLSMIPLAAASIWLTVTNKEESSAYGKLEFSNFIG 203
           M +  E     + H   L ++D  LRL +IPL+ A+IWLTVTN++++S YGKLEFSN  G
Sbjct: 1   MSNLAETAPISSAHIPTLKLIDCSLRLCVIPLSVATIWLTVTNQQDNSIYGKLEFSNLTG 60

Query: 204 LKYMICINAISAGYALVALVSSWLRCLVTKAWVFFVSDQVVTYLMVTSGAAVVEILYLAY 383
           LKYM+CI+ ISAGYALVA+V+SW+RCLV KAW+FFVSDQ++ YLMVTSGAAV+EILYLAY
Sbjct: 61  LKYMVCISGISAGYALVAVVASWVRCLVNKAWLFFVSDQIMAYLMVTSGAAVLEILYLAY 120

Query: 384 NGDRDVSWSEACSSFGRFCSRXXXXXXXXXXXXTCFFFLSLISAYRFFSKFEPPVPRKGV 563
            GDR VSWSEACS +GRFCSR             CF  L++ISAYR FS FEPPV  K V
Sbjct: 121 KGDRGVSWSEACSXYGRFCSRVNLALALHALALCCFLVLAVISAYRVFSMFEPPVSSKEV 180

Query: 564 HED 572
            E+
Sbjct: 181 EEE 183


>ref|XP_002315238.1| predicted protein [Populus trichocarpa]
           gi|341958558|sp|B9HTL5.1|CSPLC_POPTR RecName:
           Full=CASP-like protein POPTRDRAFT_833824
           gi|222864278|gb|EEF01409.1| predicted protein [Populus
           trichocarpa]
          Length = 170

 Score =  213 bits (542), Expect = 2e-53
 Identities = 103/167 (61%), Positives = 129/167 (77%), Gaps = 1/167 (0%)
 Frame = +3

Query: 75  LHILDSILRLSMIPLAAASIWLTVTNKEESSAYGKLEFSNFIGLKYMICINAISAGYALV 254
           L +LD  LRLS+IPL+ A+IWLTVTNK+++S YG L++S+  GLKYM+ I+ I A YA +
Sbjct: 2   LKLLDFSLRLSVIPLSVATIWLTVTNKQDNSIYGYLKYSDLTGLKYMVFISGICASYAFI 61

Query: 255 ALVSSWLRCLVTKAWVFFVSDQVVTYLMVTSGAAVVEILYLAYNGDRDVSWSEACSSFGR 434
           A VS+W+RC+VTK W+FFVSDQ+V YLMVTSG AV+EILYLAYNGDR+VSWSEAC+S+G+
Sbjct: 62  AAVSTWIRCIVTKTWLFFVSDQIVAYLMVTSGTAVLEILYLAYNGDREVSWSEACTSYGK 121

Query: 435 FCSRXXXXXXXXXXXXTCFFFLSLISAYRFFSKFEPP-VPRKGVHED 572
           FC R            +CF  L++ISAYR FS FEPP VP K V ED
Sbjct: 122 FCYRMKLAVILHALALSCFIILAVISAYRAFSIFEPPLVPSKVVEED 168


>ref|XP_002529903.1| conserved hypothetical protein [Ricinus communis]
           gi|288559184|sp|B9SV84.1|CSPL7_RICCO RecName:
           Full=CASP-like protein RCOM_1302390
           gi|223530580|gb|EEF32457.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score =  200 bits (509), Expect = 1e-49
 Identities = 93/161 (57%), Positives = 124/161 (77%)
 Frame = +3

Query: 75  LHILDSILRLSMIPLAAASIWLTVTNKEESSAYGKLEFSNFIGLKYMICINAISAGYALV 254
           L +LDS LR+S+IPL+AA+IWLTVTN +++S+YG L++SN +GLKYM+CI+AI A YA V
Sbjct: 5   LKLLDSSLRVSVIPLSAATIWLTVTNHQDNSSYGNLKYSNIMGLKYMVCISAICASYAFV 64

Query: 255 ALVSSWLRCLVTKAWVFFVSDQVVTYLMVTSGAAVVEILYLAYNGDRDVSWSEACSSFGR 434
           A VS W++CLV K W+FFVSDQ++ YLMVTS AA +EILY+AYNGD+ V+WSEAC+S+G+
Sbjct: 65  AAVSIWIKCLVNKVWLFFVSDQIIAYLMVTSVAAAMEILYIAYNGDQKVTWSEACTSYGK 124

Query: 435 FCSRXXXXXXXXXXXXTCFFFLSLISAYRFFSKFEPPVPRK 557
           FC+               F  L++ISAYR FS ++PPV  K
Sbjct: 125 FCNGMKTALILHALTLCFFIVLAVISAYRAFSMYQPPVSSK 165


>gb|AFK35918.1| unknown [Medicago truncatula]
          Length = 187

 Score =  197 bits (502), Expect = 9e-49
 Identities = 98/183 (53%), Positives = 135/183 (73%), Gaps = 1/183 (0%)
 Frame = +3

Query: 27  RSFTENQATLANHHNNLHILDSILRLSMIPLAAASIWLTVTNKEESSAYGKLEFSNFIGL 206
           R   ++ A+  N+   L +LDS LRL  +PL+ A+IW+TVTNK+++++YG L++S+  GL
Sbjct: 3   RVHIDDNASGENNLPMLKLLDSSLRLCSVPLSLATIWITVTNKQDNTSYGTLKYSDISGL 62

Query: 207 KYMICINAISAGYALVALVSSWLRCLVTKAWVFFVSDQVVTYLMVTSGAAVVEILYLAYN 386
           KYMI ++A+ AGYA+VA V SW+R L+TKAW+FF+SDQVV YLMVTS AA +EI YLAYN
Sbjct: 63  KYMIFVSALCAGYAIVAAVCSWVRYLMTKAWIFFISDQVVAYLMVTSIAATMEIYYLAYN 122

Query: 387 GDRDVSWSEACSSFGRFCSRXXXXXXXXXXXXTCFFFLSLISAYRFFSKFEPP-VPRKGV 563
           G R+ SWS+ACSS+G+FCS+             CFF L++ISA+R FS F+PP V  + V
Sbjct: 123 GAREDSWSQACSSYGKFCSKVKLALILHMITFGCFFVLAIISAFRAFSVFDPPSVNSQEV 182

Query: 564 HED 572
           +ED
Sbjct: 183 YED 185


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