BLASTX nr result

ID: Coptis24_contig00019287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019287
         (1160 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306360.1| predicted protein [Populus trichocarpa] gi|2...   482   e-134
emb|CBI21530.3| unnamed protein product [Vitis vinifera]              481   e-133
ref|XP_002279217.1| PREDICTED: uncharacterized mitochondrial car...   481   e-133
emb|CAF04055.2| S-adenosylmethionine transporter [Nicotiana bent...   479   e-133
ref|XP_002530256.1| mitochondrial carrier protein, putative [Ric...   475   e-132

>ref|XP_002306360.1| predicted protein [Populus trichocarpa] gi|222855809|gb|EEE93356.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  482 bits (1240), Expect = e-134
 Identities = 245/309 (79%), Positives = 268/309 (86%)
 Frame = +3

Query: 57  MGPPTLAMDSKRRPEVSSDAFKSKVETKPHFASVNTLEQNPVDFLRVLFEGSIXXXXXXV 236
           MGP TLA+D+K   +   DA   K++    FAS+N  E +P DFLR+LFEG I      V
Sbjct: 1   MGPLTLAVDTKTSSKPHLDAPILKMQKTKPFASINAQEDSPFDFLRILFEGVIAGGTAGV 60

Query: 237 IVETALYPIDTIKTRLQAVRGGGKILLKGLYSGLGGNLAGVLPASAIFVGVYEPAKQKLL 416
           +VETALYPIDTIKTRLQA RGGGKI+LKGLYSGL GNLAGVLPASA+FVGVYEP KQKLL
Sbjct: 61  VVETALYPIDTIKTRLQAARGGGKIMLKGLYSGLAGNLAGVLPASALFVGVYEPTKQKLL 120

Query: 417 KIFPENLSALAHLTAGAIGGAASSLVRVPTEVVKQRMQTGQFASASNAVRLIVSKEGFRG 596
           K FPENLSA+AHLTAGA+GG A+SL+RVPTEVVKQRMQTGQF SA +AVRLIVSKEGF+G
Sbjct: 121 KTFPENLSAVAHLTAGAVGGIAASLIRVPTEVVKQRMQTGQFTSAPDAVRLIVSKEGFKG 180

Query: 597 LYAGYGSFLLRDLPFDAIQFCLYEQLRIGYKLAAKRELNDPENAIIGAFAGSLTGAITTP 776
            YAGYGSFLLRDLPFDAIQFC+YEQLRIGY++AA+RELNDPENA IGAFAG+LTGAITTP
Sbjct: 181 FYAGYGSFLLRDLPFDAIQFCIYEQLRIGYRVAAQRELNDPENAAIGAFAGALTGAITTP 240

Query: 777 LDVIKTRLMVQGPGNQYKGIFDCVQTIVREEGAPALLKGIGPRVLWIGIGGSIFFGVLER 956
           LDVIKTRLMVQG  NQYKGI DCV T+VREEG  ALLKGIGPRVLWIGIGGSIFFGVLER
Sbjct: 241 LDVIKTRLMVQGSANQYKGIVDCVSTVVREEGPTALLKGIGPRVLWIGIGGSIFFGVLER 300

Query: 957 MKRLLAQRR 983
            KRLLAQRR
Sbjct: 301 TKRLLAQRR 309


>emb|CBI21530.3| unnamed protein product [Vitis vinifera]
          Length = 366

 Score =  481 bits (1237), Expect = e-133
 Identities = 252/327 (77%), Positives = 278/327 (85%), Gaps = 6/327 (1%)
 Frame = +3

Query: 57   MGPPTLAMDSKRRPEVSSDAFKSKVET-----KPHFASVNTLEQNPVDFLRVLFEGSIXX 221
            MGP TLA+D+K+     SD+   KV+      K  FAS++T E+   +FLRVL EG +  
Sbjct: 40   MGPFTLAIDAKKSSLAVSDSSNRKVQNAQLGKKKFFASISTGEEKEFNFLRVLLEGIVAG 99

Query: 222  XXXXVIVETALYPIDTIKTRLQAVRGGGKILLKGLYSGLGGNLAGVLPASAIFVGVYEPA 401
                V+VETALYPIDTIKTRLQAVRGGGKI+  GLYSGL GNLAGVLPASAIFVGVYEP 
Sbjct: 100  GTAGVVVETALYPIDTIKTRLQAVRGGGKIVWNGLYSGLAGNLAGVLPASAIFVGVYEPT 159

Query: 402  KQKLLKIFPENLSALAHLTAGAIGGAASSLVRVPTEVVKQRMQTGQFASASNAVRLIVSK 581
            KQKLL+IFPENL+A+AHLTAGAIGG A+SLVRVPTEVVKQRMQTGQFASA +AVR+IVSK
Sbjct: 160  KQKLLQIFPENLTAVAHLTAGAIGGLAASLVRVPTEVVKQRMQTGQFASAPDAVRMIVSK 219

Query: 582  EGFRGLYAGYGSFLLRDLPFDAIQFCLYEQLRIGYKLAAKRELNDPENAIIGAFAGSLTG 761
            EGF+GLYAGY SFLLRDLPFDAIQFC+YEQ+RIGYKLAAKR+LNDPENA+IGAFAG+LTG
Sbjct: 220  EGFKGLYAGYRSFLLRDLPFDAIQFCIYEQMRIGYKLAAKRDLNDPENALIGAFAGALTG 279

Query: 762  AITTPLDVIKTRLMVQGPGNQYKGIFDCVQTIVREEGAPALLKGIGPRVLWIGIGGSIFF 941
            AITTPLDVIKTRLMVQGP NQY GI DCVQTIVREEG PALLKGIGPRVLWIGIGGSIFF
Sbjct: 280  AITTPLDVIKTRLMVQGPANQYNGIIDCVQTIVREEGPPALLKGIGPRVLWIGIGGSIFF 339

Query: 942  GVLERMKRLLAQRR-SDIQKFEPVKKD 1019
            GVLER KR LAQRR S  Q  +  K+D
Sbjct: 340  GVLERTKRALAQRRPSPNQHSDSPKQD 366


>ref|XP_002279217.1| PREDICTED: uncharacterized mitochondrial carrier YMR166C-like [Vitis
            vinifera]
          Length = 327

 Score =  481 bits (1237), Expect = e-133
 Identities = 252/327 (77%), Positives = 278/327 (85%), Gaps = 6/327 (1%)
 Frame = +3

Query: 57   MGPPTLAMDSKRRPEVSSDAFKSKVET-----KPHFASVNTLEQNPVDFLRVLFEGSIXX 221
            MGP TLA+D+K+     SD+   KV+      K  FAS++T E+   +FLRVL EG +  
Sbjct: 1    MGPFTLAIDAKKSSLAVSDSSNRKVQNAQLGKKKFFASISTGEEKEFNFLRVLLEGIVAG 60

Query: 222  XXXXVIVETALYPIDTIKTRLQAVRGGGKILLKGLYSGLGGNLAGVLPASAIFVGVYEPA 401
                V+VETALYPIDTIKTRLQAVRGGGKI+  GLYSGL GNLAGVLPASAIFVGVYEP 
Sbjct: 61   GTAGVVVETALYPIDTIKTRLQAVRGGGKIVWNGLYSGLAGNLAGVLPASAIFVGVYEPT 120

Query: 402  KQKLLKIFPENLSALAHLTAGAIGGAASSLVRVPTEVVKQRMQTGQFASASNAVRLIVSK 581
            KQKLL+IFPENL+A+AHLTAGAIGG A+SLVRVPTEVVKQRMQTGQFASA +AVR+IVSK
Sbjct: 121  KQKLLQIFPENLTAVAHLTAGAIGGLAASLVRVPTEVVKQRMQTGQFASAPDAVRMIVSK 180

Query: 582  EGFRGLYAGYGSFLLRDLPFDAIQFCLYEQLRIGYKLAAKRELNDPENAIIGAFAGSLTG 761
            EGF+GLYAGY SFLLRDLPFDAIQFC+YEQ+RIGYKLAAKR+LNDPENA+IGAFAG+LTG
Sbjct: 181  EGFKGLYAGYRSFLLRDLPFDAIQFCIYEQMRIGYKLAAKRDLNDPENALIGAFAGALTG 240

Query: 762  AITTPLDVIKTRLMVQGPGNQYKGIFDCVQTIVREEGAPALLKGIGPRVLWIGIGGSIFF 941
            AITTPLDVIKTRLMVQGP NQY GI DCVQTIVREEG PALLKGIGPRVLWIGIGGSIFF
Sbjct: 241  AITTPLDVIKTRLMVQGPANQYNGIIDCVQTIVREEGPPALLKGIGPRVLWIGIGGSIFF 300

Query: 942  GVLERMKRLLAQRR-SDIQKFEPVKKD 1019
            GVLER KR LAQRR S  Q  +  K+D
Sbjct: 301  GVLERTKRALAQRRPSPNQHSDSPKQD 327


>emb|CAF04055.2| S-adenosylmethionine transporter [Nicotiana benthamiana]
          Length = 326

 Score =  479 bits (1233), Expect = e-133
 Identities = 251/319 (78%), Positives = 272/319 (85%), Gaps = 8/319 (2%)
 Frame = +3

Query: 57  MGPPTLAMDSKRRPEVSS---DAFKSKVET-----KPHFASVNTLEQNPVDFLRVLFEGS 212
           MGP  LA+D+K     SS   DA   K++      K  FASVN+ E+ P DFLR+LFEG 
Sbjct: 1   MGPFALALDTKNSFAASSSASDASGRKMDNLQMVPKKFFASVNSGEEKPFDFLRILFEGV 60

Query: 213 IXXXXXXVIVETALYPIDTIKTRLQAVRGGGKILLKGLYSGLGGNLAGVLPASAIFVGVY 392
           I      V+VETALYPIDTIKTRLQA RGGG+I LKGLYSGL GNLAGVLPASAIFVGVY
Sbjct: 61  IAGGTAGVVVETALYPIDTIKTRLQAARGGGQIALKGLYSGLAGNLAGVLPASAIFVGVY 120

Query: 393 EPAKQKLLKIFPENLSALAHLTAGAIGGAASSLVRVPTEVVKQRMQTGQFASASNAVRLI 572
           EPAKQKLLK+ PENLSA+AHLTAGA+GG A+S VRVPTEV+KQRMQT QFASA +AVRLI
Sbjct: 121 EPAKQKLLKMLPENLSAVAHLTAGALGGLAASFVRVPTEVIKQRMQTRQFASAPDAVRLI 180

Query: 573 VSKEGFRGLYAGYGSFLLRDLPFDAIQFCLYEQLRIGYKLAAKRELNDPENAIIGAFAGS 752
           VSKEGF+GLYAGYGSFLLRDLPFDAIQFC+YEQLRIGYKLAAKR+LNDPENA+IGAFAG+
Sbjct: 181 VSKEGFKGLYAGYGSFLLRDLPFDAIQFCIYEQLRIGYKLAAKRDLNDPENAVIGAFAGA 240

Query: 753 LTGAITTPLDVIKTRLMVQGPGNQYKGIFDCVQTIVREEGAPALLKGIGPRVLWIGIGGS 932
           LTGAITTPLDVIKTRLMVQG  NQYKGI DCV+TIV EEGAPALLKGIGPRVLWIGIGGS
Sbjct: 241 LTGAITTPLDVIKTRLMVQGSANQYKGIIDCVRTIVTEEGAPALLKGIGPRVLWIGIGGS 300

Query: 933 IFFGVLERMKRLLAQRRSD 989
           IFFGVLER KR LAQ R D
Sbjct: 301 IFFGVLERTKRYLAQNRPD 319


>ref|XP_002530256.1| mitochondrial carrier protein, putative [Ricinus communis]
           gi|223530222|gb|EEF32126.1| mitochondrial carrier
           protein, putative [Ricinus communis]
          Length = 325

 Score =  475 bits (1223), Expect = e-132
 Identities = 242/320 (75%), Positives = 271/320 (84%), Gaps = 6/320 (1%)
 Frame = +3

Query: 57  MGPPTLAMDSKRRPEVSSDAFKSKV------ETKPHFASVNTLEQNPVDFLRVLFEGSIX 218
           MGP TLA+D+K   ++ SD    KV      ET+  FAS++  +  P DFLR LFEG I 
Sbjct: 1   MGPFTLAIDTKTSSKLPSDTAVRKVQSSSQLETRKAFASMSVKDDKPFDFLRTLFEGVIA 60

Query: 219 XXXXXVIVETALYPIDTIKTRLQAVRGGGKILLKGLYSGLGGNLAGVLPASAIFVGVYEP 398
                V+VETALYPIDTIKTRLQA  GGGKI+LKGLYSGL GNLAGVLPASA+FVGVYEP
Sbjct: 61  GGTAGVVVETALYPIDTIKTRLQAAHGGGKIVLKGLYSGLAGNLAGVLPASALFVGVYEP 120

Query: 399 AKQKLLKIFPENLSALAHLTAGAIGGAASSLVRVPTEVVKQRMQTGQFASASNAVRLIVS 578
            KQKLL++FPENLSA+AHLTAGAIGG A+SL+RVPTEVVKQRMQTGQF SA +AVRLI+S
Sbjct: 121 TKQKLLQMFPENLSAVAHLTAGAIGGVAASLIRVPTEVVKQRMQTGQFTSAPDAVRLIIS 180

Query: 579 KEGFRGLYAGYGSFLLRDLPFDAIQFCLYEQLRIGYKLAAKRELNDPENAIIGAFAGSLT 758
           KEGF+G+YAGYGSFLLRDLPFDAIQFC+YEQLRIGYK AA+RELNDPENA+IGAFAG+LT
Sbjct: 181 KEGFKGMYAGYGSFLLRDLPFDAIQFCIYEQLRIGYKAAARRELNDPENAVIGAFAGALT 240

Query: 759 GAITTPLDVIKTRLMVQGPGNQYKGIFDCVQTIVREEGAPALLKGIGPRVLWIGIGGSIF 938
           GAITTPLDVIKTRLMVQG  NQY GIFDCVQT+VREEG  ALLKGIGPRVLWIGIGGSIF
Sbjct: 241 GAITTPLDVIKTRLMVQGSANQYTGIFDCVQTVVREEGPTALLKGIGPRVLWIGIGGSIF 300

Query: 939 FGVLERMKRLLAQRRSDIQK 998
           FGVLE  KR L Q+R  +++
Sbjct: 301 FGVLESTKRYLVQKRPTLKQ 320


Top