BLASTX nr result

ID: Coptis24_contig00019285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019285
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB53255.1| CaMB-channel protein [Nicotiana tabacum]               126   2e-27
gb|AAN65366.1| cyclic nucleotide-gated channel C [Phaseolus vulg...   124   6e-27
ref|XP_002268992.1| PREDICTED: cyclic nucleotide-gated ion chann...   124   1e-26
ref|XP_003526699.1| PREDICTED: cyclic nucleotide-gated ion chann...   123   1e-26
ref|XP_003544128.1| PREDICTED: cyclic nucleotide-gated ion chann...   122   2e-26

>gb|AAB53255.1| CaMB-channel protein [Nicotiana tabacum]
          Length = 233

 Score =  126 bits (317), Expect = 2e-27
 Identities = 67/90 (74%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
 Frame = +2

Query: 2   EGDPVDDILFIVRGKLLT-TTEADLSDFMNCDYLKAGDFCGQELLTWALVPHSSSNRPIS 178
           EGDPVD++LFI+RGKLLT TT    + F N DYLKAGDFCG+ELLTWAL PH S+N PIS
Sbjct: 31  EGDPVDEMLFIMRGKLLTVTTNGGRTGFFNSDYLKAGDFCGEELLTWALDPHLSNNLPIS 90

Query: 179 TRTVQALSEVVAFALTADDLKSIASNSQFR 268
           TRTVQALSEV AFAL ADDLK +A  SQFR
Sbjct: 91  TRTVQALSEVEAFALVADDLKFVA--SQFR 118


>gb|AAN65366.1| cyclic nucleotide-gated channel C [Phaseolus vulgaris]
          Length = 566

 Score =  124 bits (312), Expect = 6e-27
 Identities = 66/90 (73%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
 Frame = +2

Query: 2   EGDPVDDILFIVRGKLLT-TTEADLSDFMNCDYLKAGDFCGQELLTWALVPHSSSNRPIS 178
           EGDPVD++LFI+RGKLLT TT    + F N +YLKAGDFCG+ELLTWAL PHSSSN P S
Sbjct: 367 EGDPVDEMLFIMRGKLLTITTNGGRTGFFNSEYLKAGDFCGEELLTWALDPHSSSNLPTS 426

Query: 179 TRTVQALSEVVAFALTADDLKSIASNSQFR 268
           TRTVQ LSEV AFAL ADDLK +A  SQFR
Sbjct: 427 TRTVQTLSEVEAFALKADDLKFVA--SQFR 454


>ref|XP_002268992.1| PREDICTED: cyclic nucleotide-gated ion channel 1 [Vitis vinifera]
           gi|302143681|emb|CBI22542.3| unnamed protein product
           [Vitis vinifera]
          Length = 709

 Score =  124 bits (310), Expect = 1e-26
 Identities = 65/90 (72%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
 Frame = +2

Query: 2   EGDPVDDILFIVRGKLLT-TTEADLSDFMNCDYLKAGDFCGQELLTWALVPHSSSNRPIS 178
           EGDPVD++LF++RGKL T TT    + F+N DYLKAGDFCG+ELLTWAL PHS+SN PIS
Sbjct: 510 EGDPVDEMLFVMRGKLSTMTTNGGRTGFLNSDYLKAGDFCGEELLTWALDPHSTSNLPIS 569

Query: 179 TRTVQALSEVVAFALTADDLKSIASNSQFR 268
           TRTV ALSEV AFAL ADDLK +A  SQFR
Sbjct: 570 TRTVLALSEVEAFALMADDLKFVA--SQFR 597


>ref|XP_003526699.1| PREDICTED: cyclic nucleotide-gated ion channel 1-like [Glycine max]
          Length = 715

 Score =  123 bits (309), Expect = 1e-26
 Identities = 66/90 (73%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
 Frame = +2

Query: 2   EGDPVDDILFIVRGKLLT-TTEADLSDFMNCDYLKAGDFCGQELLTWALVPHSSSNRPIS 178
           EGDPVD++LFI+RGKLLT TT    + F N +YLKAGDFCG+ELLTWAL P SSSN PIS
Sbjct: 516 EGDPVDEMLFIMRGKLLTVTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPQSSSNLPIS 575

Query: 179 TRTVQALSEVVAFALTADDLKSIASNSQFR 268
           TRTVQ LSEV AFAL ADDLK +A  SQFR
Sbjct: 576 TRTVQTLSEVEAFALKADDLKFVA--SQFR 603


>ref|XP_003544128.1| PREDICTED: cyclic nucleotide-gated ion channel 1-like [Glycine max]
          Length = 718

 Score =  122 bits (307), Expect = 2e-26
 Identities = 65/90 (72%), Positives = 72/90 (80%), Gaps = 1/90 (1%)
 Frame = +2

Query: 2   EGDPVDDILFIVRGKLLT-TTEADLSDFMNCDYLKAGDFCGQELLTWALVPHSSSNRPIS 178
           EGDPVD++LFI+RGKLLT TT    + F N +YLKAGDFCG+ELLTWAL PHSS N P S
Sbjct: 519 EGDPVDEMLFIMRGKLLTMTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPHSSPNLPTS 578

Query: 179 TRTVQALSEVVAFALTADDLKSIASNSQFR 268
           TRTVQ LSEV AFAL ADDLK +A  SQFR
Sbjct: 579 TRTVQTLSEVEAFALKADDLKFVA--SQFR 606


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