BLASTX nr result

ID: Coptis24_contig00019273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019273
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599782.1| Vacuolar protein sorting-associated protein-...    99   5e-19
ref|XP_003551927.1| PREDICTED: vacuolar protein sorting-associat...    97   1e-18
ref|XP_002283428.1| PREDICTED: vacuolar protein sorting-associat...    97   2e-18
gb|AFK37940.1| unknown [Lotus japonicus]                               96   2e-18
ref|XP_002526647.1| vacuolar protein sorting vps16, putative [Ri...    96   3e-18

>ref|XP_003599782.1| Vacuolar protein sorting-associated protein-like protein [Medicago
           truncatula] gi|355488830|gb|AES70033.1| Vacuolar protein
           sorting-associated protein-like protein [Medicago
           truncatula]
          Length = 856

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 49/51 (96%), Positives = 50/51 (98%)
 Frame = -2

Query: 261 EHAKLLRMQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAALKVKQEFKV 109
           EHAKLLR+QHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAALKVK EFKV
Sbjct: 686 EHAKLLRLQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAALKVKTEFKV 736


>ref|XP_003551927.1| PREDICTED: vacuolar protein sorting-associated protein 16 homolog
           [Glycine max]
          Length = 843

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/51 (94%), Positives = 50/51 (98%)
 Frame = -2

Query: 261 EHAKLLRMQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAALKVKQEFKV 109
           EHAKLLR+QHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAA+KVK EFKV
Sbjct: 674 EHAKLLRIQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAAMKVKTEFKV 724


>ref|XP_002283428.1| PREDICTED: vacuolar protein sorting-associated protein 16 homolog
           [Vitis vinifera] gi|302143532|emb|CBI22093.3| unnamed
           protein product [Vitis vinifera]
          Length = 838

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/51 (92%), Positives = 50/51 (98%)
 Frame = -2

Query: 261 EHAKLLRMQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAALKVKQEFKV 109
           EHAKL+R+QHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAA+KVK EFKV
Sbjct: 671 EHAKLIRIQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAAMKVKTEFKV 721


>gb|AFK37940.1| unknown [Lotus japonicus]
          Length = 375

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/51 (94%), Positives = 49/51 (96%)
 Frame = -2

Query: 261 EHAKLLRMQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAALKVKQEFKV 109
           EHAKLLR+QHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAA KVK EFKV
Sbjct: 205 EHAKLLRIQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAATKVKTEFKV 255


>ref|XP_002526647.1| vacuolar protein sorting vps16, putative [Ricinus communis]
           gi|223534014|gb|EEF35735.1| vacuolar protein sorting
           vps16, putative [Ricinus communis]
          Length = 851

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/51 (92%), Positives = 50/51 (98%)
 Frame = -2

Query: 261 EHAKLLRMQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAALKVKQEFKV 109
           EHAKLLR+QHELEV+TKQAIFVDSSISDTIRTCIVLGNHRAA+KVK EFKV
Sbjct: 682 EHAKLLRIQHELEVSTKQAIFVDSSISDTIRTCIVLGNHRAAIKVKTEFKV 732


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