BLASTX nr result

ID: Coptis24_contig00019269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019269
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271758.1| PREDICTED: 2-methoxy-6-polyprenyl-1,4-benzoq...   144   1e-32
ref|XP_004165293.1| PREDICTED: 2-methoxy-6-polyprenyl-1,4-benzoq...   137   1e-30
ref|XP_004150889.1| PREDICTED: 2-methoxy-6-polyprenyl-1,4-benzoq...   137   1e-30
ref|XP_002324457.1| predicted protein [Populus trichocarpa] gi|2...   131   5e-29
emb|CAN82031.1| hypothetical protein VITISV_012089 [Vitis vinifera]   130   1e-28

>ref|XP_002271758.1| PREDICTED: 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase,
           mitochondrial [Vitis vinifera]
           gi|297737279|emb|CBI26480.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score =  144 bits (362), Expect = 1e-32
 Identities = 68/90 (75%), Positives = 80/90 (88%)
 Frame = +1

Query: 73  MAFMTSVRNLRSKLPAVLTRTCLVHSHATSFGFKDVPEEDKSRLVGNVFSSVASSYDLMN 252
           MA  T+  N+R+KL  + + T L+HSHATSFGFK+V EE+KS++VGNVF+SVASSYDLMN
Sbjct: 1   MALRTASMNMRNKLLPMFSATSLLHSHATSFGFKEVQEEEKSQMVGNVFTSVASSYDLMN 60

Query: 253 DLMSGGLHRLWKDRLVSELHPFPGMKHLDV 342
           DLMSGGLHRLWKDRLVS+LHPFPGMKHLDV
Sbjct: 61  DLMSGGLHRLWKDRLVSKLHPFPGMKHLDV 90


>ref|XP_004165293.1| PREDICTED: 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase,
           mitochondrial-like [Cucumis sativus]
          Length = 289

 Score =  137 bits (344), Expect = 1e-30
 Identities = 66/90 (73%), Positives = 76/90 (84%)
 Frame = +1

Query: 73  MAFMTSVRNLRSKLPAVLTRTCLVHSHATSFGFKDVPEEDKSRLVGNVFSSVASSYDLMN 252
           MA  +  R + SK   + +   L+HSHATSFGFK+VPEE+KSRLVGNVFS+VAS+YDLMN
Sbjct: 1   MALRSVTRRIGSKFFPMFSTANLLHSHATSFGFKEVPEEEKSRLVGNVFSNVASNYDLMN 60

Query: 253 DLMSGGLHRLWKDRLVSELHPFPGMKHLDV 342
           DLMSGGLHRLWKDRLVSEL+PFPGM HLDV
Sbjct: 61  DLMSGGLHRLWKDRLVSELNPFPGMNHLDV 90


>ref|XP_004150889.1| PREDICTED: 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase,
           mitochondrial-like [Cucumis sativus]
          Length = 419

 Score =  137 bits (344), Expect = 1e-30
 Identities = 66/90 (73%), Positives = 76/90 (84%)
 Frame = +1

Query: 73  MAFMTSVRNLRSKLPAVLTRTCLVHSHATSFGFKDVPEEDKSRLVGNVFSSVASSYDLMN 252
           MA  +  R + SK   + +   L+HSHATSFGFK+VPEE+KSRLVGNVFS+VAS+YDLMN
Sbjct: 1   MALRSVTRRIGSKFFPMFSSANLLHSHATSFGFKEVPEEEKSRLVGNVFSNVASNYDLMN 60

Query: 253 DLMSGGLHRLWKDRLVSELHPFPGMKHLDV 342
           DLMSGGLHRLWKDRLVSEL+PFPGM HLDV
Sbjct: 61  DLMSGGLHRLWKDRLVSELNPFPGMNHLDV 90


>ref|XP_002324457.1| predicted protein [Populus trichocarpa] gi|222865891|gb|EEF03022.1|
           predicted protein [Populus trichocarpa]
          Length = 289

 Score =  131 bits (330), Expect = 5e-29
 Identities = 66/90 (73%), Positives = 74/90 (82%)
 Frame = +1

Query: 73  MAFMTSVRNLRSKLPAVLTRTCLVHSHATSFGFKDVPEEDKSRLVGNVFSSVASSYDLMN 252
           MA     R L SK   +L+ T  +HSHATSFGFK V EE+KS++VGNVFSSVAS+YDLMN
Sbjct: 1   MALKLVSRKLGSKFLPMLSSTSPLHSHATSFGFKHVREEEKSQMVGNVFSSVASNYDLMN 60

Query: 253 DLMSGGLHRLWKDRLVSELHPFPGMKHLDV 342
           DLMSGGLHRLWKDRLVS L+PFPGMKHLDV
Sbjct: 61  DLMSGGLHRLWKDRLVSMLNPFPGMKHLDV 90


>emb|CAN82031.1| hypothetical protein VITISV_012089 [Vitis vinifera]
          Length = 273

 Score =  130 bits (326), Expect = 1e-28
 Identities = 60/74 (81%), Positives = 69/74 (93%)
 Frame = +1

Query: 121 VLTRTCLVHSHATSFGFKDVPEEDKSRLVGNVFSSVASSYDLMNDLMSGGLHRLWKDRLV 300
           + + T L+HSHATSFGFK+V EE+KS++VGNVF+SVASSYDLMNDLMS GLHRLWKDRLV
Sbjct: 1   MFSATSLLHSHATSFGFKEVQEEEKSQMVGNVFTSVASSYDLMNDLMSAGLHRLWKDRLV 60

Query: 301 SELHPFPGMKHLDV 342
           S+LHPFPGMKHLDV
Sbjct: 61  SKLHPFPGMKHLDV 74


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