BLASTX nr result

ID: Coptis24_contig00019263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019263
         (757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305868.1| predicted protein [Populus trichocarpa] gi|2...   170   3e-40
ref|XP_002301698.1| predicted protein [Populus trichocarpa] gi|2...   160   4e-37
ref|XP_002532467.1| Protein kinase APK1B, chloroplast precursor,...   159   8e-37
ref|XP_002274329.2| PREDICTED: probable receptor-like serine/thr...   158   1e-36
ref|NP_001242440.1| uncharacterized protein LOC100808074 [Glycin...   140   3e-31

>ref|XP_002305868.1| predicted protein [Populus trichocarpa] gi|222848832|gb|EEE86379.1|
           predicted protein [Populus trichocarpa]
          Length = 520

 Score =  170 bits (431), Expect = 3e-40
 Identities = 87/137 (63%), Positives = 109/137 (79%), Gaps = 2/137 (1%)
 Frame = -2

Query: 756 GRKPIEARKTLEDENLVLWAKPLLQKA--ATEELLDPRIKLSKRNSRKISRMVQAASACI 583
           GRKPIEARK L +ENLVLWAKPLLQK   A EELLDPR+K + RN+ +I+ M+QAA+ACI
Sbjct: 388 GRKPIEARKPLREENLVLWAKPLLQKGNEAIEELLDPRLKCTLRNTTQITHMIQAATACI 447

Query: 582 NSEERCRPSIDQVISILRGLEESIYSNREKSFTEYGSMLDCYPHLHDLQTKSEMKSHFAI 403
           ++EE  RP ID++I ILRG E+ IYSNR+KS   +  ++DCYP L   QTKSEM SH A+
Sbjct: 448 SNEESRRPGIDEIIGILRGEEQPIYSNRKKS--NFSGIIDCYPQLQ--QTKSEMNSHLAL 503

Query: 402 AMLGVSDLEDDNNLHCR 352
           AMLGVS+ EDD++L+CR
Sbjct: 504 AMLGVSEFEDDDHLYCR 520


>ref|XP_002301698.1| predicted protein [Populus trichocarpa] gi|222843424|gb|EEE80971.1|
           predicted protein [Populus trichocarpa]
          Length = 523

 Score =  160 bits (404), Expect = 4e-37
 Identities = 82/137 (59%), Positives = 107/137 (78%), Gaps = 2/137 (1%)
 Frame = -2

Query: 756 GRKPIEARKTLEDENLVLWAKPLLQKA--ATEELLDPRIKLSKRNSRKISRMVQAASACI 583
           GRKPIEAR+   +ENLVLWAKPLLQK   A EELLDPR++ + RN+ +I +M+QAA+AC+
Sbjct: 391 GRKPIEARRPPGEENLVLWAKPLLQKGKGAIEELLDPRLECTLRNTTQIIQMIQAATACV 450

Query: 582 NSEERCRPSIDQVISILRGLEESIYSNREKSFTEYGSMLDCYPHLHDLQTKSEMKSHFAI 403
           ++EE  RP ID++I +LRG E+ IYSNR+KS   +  ++DCYP L   QTKSEM SH A+
Sbjct: 451 SNEESRRPGIDEIIGMLRGEEQPIYSNRKKS--NFSGIIDCYPQLQ--QTKSEMNSHLAL 506

Query: 402 AMLGVSDLEDDNNLHCR 352
           AMLGVS+ EDD++L CR
Sbjct: 507 AMLGVSEFEDDDHLCCR 523


>ref|XP_002532467.1| Protein kinase APK1B, chloroplast precursor, putative [Ricinus
           communis] gi|223527825|gb|EEF29923.1| Protein kinase
           APK1B, chloroplast precursor, putative [Ricinus
           communis]
          Length = 437

 Score =  159 bits (401), Expect = 8e-37
 Identities = 80/137 (58%), Positives = 108/137 (78%), Gaps = 2/137 (1%)
 Frame = -2

Query: 756 GRKPIEARKTLEDENLVLWAKPLLQKA--ATEELLDPRIKLSKRNSRKISRMVQAASACI 583
           GRKPIEA++   +ENLVLWAKPLLQK   A EELLDPRIK + + + +I++M+QAA+AC+
Sbjct: 305 GRKPIEAKRPSGEENLVLWAKPLLQKGKGAVEELLDPRIKCTLKKTTQITQMIQAAAACV 364

Query: 582 NSEERCRPSIDQVISILRGLEESIYSNREKSFTEYGSMLDCYPHLHDLQTKSEMKSHFAI 403
           ++EE  RP ID++I+ILRG EE   +N++KS   +  ++DCYP L   QTKSEMKSH A+
Sbjct: 365 SNEESRRPGIDEIIAILRGEEEPFNTNKKKS--NFSGIIDCYPQLQ--QTKSEMKSHLAL 420

Query: 402 AMLGVSDLEDDNNLHCR 352
           AMLGVS+ EDD++L+CR
Sbjct: 421 AMLGVSEFEDDDHLYCR 437


>ref|XP_002274329.2| PREDICTED: probable receptor-like serine/threonine-protein kinase
           At5g57670-like [Vitis vinifera]
           gi|296087159|emb|CBI33533.3| unnamed protein product
           [Vitis vinifera]
          Length = 519

 Score =  158 bits (400), Expect = 1e-36
 Identities = 81/135 (60%), Positives = 101/135 (74%)
 Frame = -2

Query: 756 GRKPIEARKTLEDENLVLWAKPLLQKAATEELLDPRIKLSKRNSRKISRMVQAASACINS 577
           GRKPIEAR+   +ENLVLWAKPLLQ+ + E+LLDP +KL+ +NS +I RMVQAA+ACINS
Sbjct: 388 GRKPIEARRPPGEENLVLWAKPLLQQESIEQLLDPCLKLTPKNSNQIGRMVQAAAACINS 447

Query: 576 EERCRPSIDQVISILRGLEESIYSNREKSFTEYGSMLDCYPHLHDLQTKSEMKSHFAIAM 397
           EE  RPSID+V+ ILRG E +  S ++  F   G + DCY     LQTKSEM+SH A+AM
Sbjct: 448 EESRRPSIDEVVVILRGREPNCSSRKKSGFPGNGFVTDCYA---QLQTKSEMRSHLALAM 504

Query: 396 LGVSDLEDDNNLHCR 352
           LGV D EDD + +CR
Sbjct: 505 LGVPDFEDDAHFYCR 519


>ref|NP_001242440.1| uncharacterized protein LOC100808074 [Glycine max]
           gi|255635407|gb|ACU18056.1| unknown [Glycine max]
          Length = 508

 Score =  140 bits (353), Expect = 3e-31
 Identities = 75/138 (54%), Positives = 100/138 (72%), Gaps = 3/138 (2%)
 Frame = -2

Query: 756 GRKPIEARKTLEDENLVLWAKPLLQKA--ATEELLDPRIKLSKRNSRKISRMVQAASACI 583
           GRKPIEA +   DENLVLWAKP LQK   A EELLDP++K S + S ++ RM++AA+AC+
Sbjct: 373 GRKPIEATRPSGDENLVLWAKPFLQKGKGAIEELLDPQLKCSLKFSNQMGRMIEAAAACV 432

Query: 582 NSEERCRPSIDQVISILRGLEESIYSNREK-SFTEYGSMLDCYPHLHDLQTKSEMKSHFA 406
            +EE  RP I ++I+IL+G EE + S R+K SF   G ++DCY  L   QT +EMKSH A
Sbjct: 433 TNEESRRPGIREIIAILKGEEEPLLSKRKKSSFLGNGCVIDCYSQLQ--QTNNEMKSHLA 490

Query: 405 IAMLGVSDLEDDNNLHCR 352
           +AMLGV++ EDD+ L+ R
Sbjct: 491 LAMLGVAEFEDDDYLYGR 508


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