BLASTX nr result

ID: Coptis24_contig00019261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019261
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521771.1| phosphoglycerate dehydrogenase, putative [Ri...   159   2e-37
ref|XP_003634565.1| PREDICTED: d-3-phosphoglycerate dehydrogenas...   158   5e-37
emb|CBI39250.3| unnamed protein product [Vitis vinifera]              158   5e-37
ref|XP_002282092.1| PREDICTED: d-3-phosphoglycerate dehydrogenas...   158   5e-37
ref|XP_002327369.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-36

>ref|XP_002521771.1| phosphoglycerate dehydrogenase, putative [Ricinus communis]
           gi|223538984|gb|EEF40581.1| phosphoglycerate
           dehydrogenase, putative [Ricinus communis]
          Length = 380

 Score =  159 bits (402), Expect = 2e-37
 Identities = 77/121 (63%), Positives = 91/121 (75%)
 Frame = +2

Query: 74  GETNNNITRVLFCGPHFPASQNYTRDYLQSYPFIQXXXXXXXXXXXXIGDYQIGVVKMCR 253
           G+ +N ITRVLFCGPHFPAS  YT+ YLQ YPFIQ            I +Y I V K  R
Sbjct: 40  GDNSNYITRVLFCGPHFPASHIYTKQYLQKYPFIQVDDVPLNDVPNVIANYHICVSKTTR 99

Query: 254 FDAQLISRANKMKLVMQFGVGLEGVDVDAATRCGIKVARIPGNVCGNSASCAEMAIYLMS 433
            D+ +ISRA +MKL+MQFGVGLEG+++DAA+RCGIKVARIPG+  GN+ASCAEMAIYLM 
Sbjct: 100 IDSSIISRATQMKLIMQFGVGLEGINIDAASRCGIKVARIPGDFTGNAASCAEMAIYLML 159

Query: 434 G 436
           G
Sbjct: 160 G 160


>ref|XP_003634565.1| PREDICTED: d-3-phosphoglycerate dehydrogenase-like isoform 2 [Vitis
           vinifera]
          Length = 333

 Score =  158 bits (399), Expect = 5e-37
 Identities = 77/122 (63%), Positives = 92/122 (75%)
 Frame = +2

Query: 71  VGETNNNITRVLFCGPHFPASQNYTRDYLQSYPFIQXXXXXXXXXXXXIGDYQIGVVKMC 250
           V ++N  ITR+LFCGP+FPAS  YTR+YLQ+YPFIQ            I DY + +VK  
Sbjct: 2   VKDSNGCITRLLFCGPNFPASNKYTREYLQNYPFIQVDDSSFEDVPDVIADYDMCIVKSM 61

Query: 251 RFDAQLISRANKMKLVMQFGVGLEGVDVDAATRCGIKVARIPGNVCGNSASCAEMAIYLM 430
           R D+ +ISRANKMKL+MQFGVGLEGVD++AAT+CGIKVARI     GN+ASCAEMAIYLM
Sbjct: 62  RLDSNIISRANKMKLIMQFGVGLEGVDINAATKCGIKVARIASGETGNAASCAEMAIYLM 121

Query: 431 SG 436
            G
Sbjct: 122 LG 123


>emb|CBI39250.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  158 bits (399), Expect = 5e-37
 Identities = 77/122 (63%), Positives = 92/122 (75%)
 Frame = +2

Query: 71  VGETNNNITRVLFCGPHFPASQNYTRDYLQSYPFIQXXXXXXXXXXXXIGDYQIGVVKMC 250
           V ++N  ITR+LFCGP+FPAS  YTR+YLQ+YPFIQ            I DY + +VK  
Sbjct: 2   VKDSNGCITRLLFCGPNFPASNKYTREYLQNYPFIQVDDSSFEDVPDVIADYDMCIVKSM 61

Query: 251 RFDAQLISRANKMKLVMQFGVGLEGVDVDAATRCGIKVARIPGNVCGNSASCAEMAIYLM 430
           R D+ +ISRANKMKL+MQFGVGLEGVD++AAT+CGIKVARI     GN+ASCAEMAIYLM
Sbjct: 62  RLDSNIISRANKMKLIMQFGVGLEGVDINAATKCGIKVARIASGETGNAASCAEMAIYLM 121

Query: 431 SG 436
            G
Sbjct: 122 LG 123


>ref|XP_002282092.1| PREDICTED: d-3-phosphoglycerate dehydrogenase-like isoform 1 [Vitis
           vinifera]
          Length = 373

 Score =  158 bits (399), Expect = 5e-37
 Identities = 77/122 (63%), Positives = 92/122 (75%)
 Frame = +2

Query: 71  VGETNNNITRVLFCGPHFPASQNYTRDYLQSYPFIQXXXXXXXXXXXXIGDYQIGVVKMC 250
           V ++N  ITR+LFCGP+FPAS  YTR+YLQ+YPFIQ            I DY + +VK  
Sbjct: 32  VKDSNGCITRLLFCGPNFPASNKYTREYLQNYPFIQVDDSSFEDVPDVIADYDMCIVKSM 91

Query: 251 RFDAQLISRANKMKLVMQFGVGLEGVDVDAATRCGIKVARIPGNVCGNSASCAEMAIYLM 430
           R D+ +ISRANKMKL+MQFGVGLEGVD++AAT+CGIKVARI     GN+ASCAEMAIYLM
Sbjct: 92  RLDSNIISRANKMKLIMQFGVGLEGVDINAATKCGIKVARIASGETGNAASCAEMAIYLM 151

Query: 431 SG 436
            G
Sbjct: 152 LG 153


>ref|XP_002327369.1| predicted protein [Populus trichocarpa] gi|222835739|gb|EEE74174.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score =  155 bits (393), Expect = 2e-36
 Identities = 75/122 (61%), Positives = 92/122 (75%)
 Frame = +2

Query: 71  VGETNNNITRVLFCGPHFPASQNYTRDYLQSYPFIQXXXXXXXXXXXXIGDYQIGVVKMC 250
           VG ++ +ITRVLFCGP+FPAS  YT++YLQ YPFIQ            I +Y I +VK  
Sbjct: 2   VGNSDKHITRVLFCGPYFPASHQYTKEYLQKYPFIQVDDVPLAVVPDVISNYNICIVKNM 61

Query: 251 RFDAQLISRANKMKLVMQFGVGLEGVDVDAATRCGIKVARIPGNVCGNSASCAEMAIYLM 430
           R  + +ISRA +MKL+MQFGVG+EGVD+DAAT+ GIKVARIPG+  GN+ASCAEMAIYLM
Sbjct: 62  RLTSNIISRATQMKLIMQFGVGIEGVDIDAATKYGIKVARIPGDATGNAASCAEMAIYLM 121

Query: 431 SG 436
            G
Sbjct: 122 LG 123


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