BLASTX nr result

ID: Coptis24_contig00019255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019255
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298589.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002298589.1| predicted protein [Populus trichocarpa] gi|222845847|gb|EEE83394.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
 Frame = -1

Query: 337 SVKHDTEIERTSRSNDEDTSLQFKPSDSTALDTLPITEKKQEVE---FASDDTIDLMQDY 167
           S + D  I+ +    +++ SL+ K  D     +  + E+ Q++E       D  DL++ Y
Sbjct: 137 SGEEDETIQESVSLKEQEESLEVKSEDRDQAKSDFVQERDQKLEQDELKILDETDLLKSY 196

Query: 166 DKLWGSLNVEAMVHSETNPSNDYSPSFSIEDSVNTSMNESISMQEDS-QKWVPSVD 2
           + L GSL+V + ++ ETN S  YS     ++S N S  E  S+QEDS  +W+ SVD
Sbjct: 197 EMLCGSLDVGSWINQETNTSTSYSS----QESNNLSAGEFHSIQEDSVSQWIESVD 248


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