BLASTX nr result

ID: Coptis24_contig00019254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019254
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268761.2| PREDICTED: LOW QUALITY PROTEIN: protein PHYL...   100   2e-19
ref|NP_177055.2| 2-oxoglutarate decarboxylase/ hydro-lyase/ magn...    89   4e-16
dbj|BAE99027.1| hypothetical protein [Arabidopsis thaliana]            89   4e-16
gb|AAZ40195.1| chloroplast Phyllo [Arabidopsis thaliana]               89   4e-16
ref|XP_002887212.1| 2-oxoglutarate decarboxylase/ hydro-lyase/ m...    88   6e-16

>ref|XP_002268761.2| PREDICTED: LOW QUALITY PROTEIN: protein PHYLLO, chloroplastic-like
            [Vitis vinifera]
          Length = 1614

 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/79 (62%), Positives = 61/79 (77%)
 Frame = -2

Query: 245  KTDPSVLNRYFYTSHNMSIGKLCEAHSVNHLQVRTKTDLQRALSISQQLEADFIIEVESC 66
            +T+  VL++YFYTSHN+SIGKLC AH + HL+VRTK +LQ AL  SQQ   D +IEVESC
Sbjct: 784  RTERRVLDQYFYTSHNVSIGKLCLAHGMKHLEVRTKIELQDALFTSQQENRDCVIEVESC 843

Query: 65   IEDNATFHSTLKRTARLAA 9
            I+ NA FHSTL++ A  AA
Sbjct: 844  IDSNAAFHSTLRKFACQAA 862


>ref|NP_177055.2| 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding
            protein [Arabidopsis thaliana]
            gi|341941250|sp|Q15KI9.2|PHYLO_ARATH RecName:
            Full=Protein PHYLLO, chloroplastic; Includes: RecName:
            Full=Inactive isochorismate synthase; AltName: Full=MENF;
            Includes: RecName:
            Full=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
            carboxylate synthase; AltName: Full=MEND; Includes:
            RecName: Full=o-succinylbenzoate synthase; AltName:
            Full=MENC; Includes: RecName:
            Full=2-succinyl-6-hydroxy-2,
            4-cyclohexadiene-1-carboxylate synthase; AltName:
            Full=MENH; Flags: Precursor gi|332196734|gb|AEE34855.1|
            2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion
            binding protein [Arabidopsis thaliana]
          Length = 1715

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/81 (55%), Positives = 58/81 (71%)
 Frame = -2

Query: 245  KTDPSVLNRYFYTSHNMSIGKLCEAHSVNHLQVRTKTDLQRALSISQQLEADFIIEVESC 66
            KT+PSVLN+YFYT+H++SI  LC AH V ++ V TK++L+ AL +    E D I+EVES 
Sbjct: 891  KTEPSVLNQYFYTAHDISIENLCLAHGVRYVHVGTKSELEDALFVPSVEEMDCIVEVESS 950

Query: 65   IEDNATFHSTLKRTARLAAHN 3
            I  NA  HSTL+R AR AA N
Sbjct: 951  INANAIVHSTLERFARQAAEN 971


>dbj|BAE99027.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1371

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/81 (55%), Positives = 58/81 (71%)
 Frame = -2

Query: 245 KTDPSVLNRYFYTSHNMSIGKLCEAHSVNHLQVRTKTDLQRALSISQQLEADFIIEVESC 66
           KT+PSVLN+YFYT+H++SI  LC AH V ++ V TK++L+ AL +    E D I+EVES 
Sbjct: 547 KTEPSVLNQYFYTAHDISIENLCLAHGVRYVHVGTKSELEDALFVPSVEEMDCIVEVESS 606

Query: 65  IEDNATFHSTLKRTARLAAHN 3
           I  NA  HSTL+R AR AA N
Sbjct: 607 INANAIVHSTLERFARQAAEN 627


>gb|AAZ40195.1| chloroplast Phyllo [Arabidopsis thaliana]
          Length = 1715

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/81 (55%), Positives = 58/81 (71%)
 Frame = -2

Query: 245  KTDPSVLNRYFYTSHNMSIGKLCEAHSVNHLQVRTKTDLQRALSISQQLEADFIIEVESC 66
            KT+PSVLN+YFYT+H++SI  LC AH V ++ V TK++L+ AL +    E D I+EVES 
Sbjct: 891  KTEPSVLNQYFYTAHDISIENLCLAHGVRYVHVGTKSELEDALFVPSVEEMDCIVEVESS 950

Query: 65   IEDNATFHSTLKRTARLAAHN 3
            I  NA  HSTL+R AR AA N
Sbjct: 951  INANAIVHSTLERFARQAAEN 971


>ref|XP_002887212.1| 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding
            protein [Arabidopsis lyrata subsp. lyrata]
            gi|297333053|gb|EFH63471.1| 2-oxoglutarate decarboxylase/
            hydro-lyase/ magnesium ion binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1716

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/81 (55%), Positives = 57/81 (70%)
 Frame = -2

Query: 245  KTDPSVLNRYFYTSHNMSIGKLCEAHSVNHLQVRTKTDLQRALSISQQLEADFIIEVESC 66
            +T+PSVLN+YFYTSH++SI  LC AH V ++ V TK++L  AL +    E D I+EVES 
Sbjct: 893  RTEPSVLNQYFYTSHDISIENLCLAHGVRYVHVGTKSELDDALFVPSVEEMDSIVEVESS 952

Query: 65   IEDNATFHSTLKRTARLAAHN 3
            I  NA  HSTL+R AR AA N
Sbjct: 953  INANAIVHSTLERFARQAAEN 973


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