BLASTX nr result

ID: Coptis24_contig00019253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019253
         (987 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273700.1| PREDICTED: reticulon-like protein B12 [Vitis...   250   4e-64
ref|XP_004137740.1| PREDICTED: reticulon-like protein B12-like [...   233   5e-59
ref|XP_003516933.1| PREDICTED: reticulon-like protein B12-like [...   228   2e-57
ref|XP_003520935.1| PREDICTED: reticulon-like protein B12-like [...   225   1e-56
ref|XP_002527867.1| 3-beta-hydroxy-delta5-steroid dehydrogenase,...   218   1e-54

>ref|XP_002273700.1| PREDICTED: reticulon-like protein B12 [Vitis vinifera]
           gi|297740256|emb|CBI30438.3| unnamed protein product
           [Vitis vinifera]
          Length = 209

 Score =  250 bits (638), Expect = 4e-64
 Identities = 127/202 (62%), Positives = 158/202 (78%), Gaps = 4/202 (1%)
 Frame = +3

Query: 54  RLFNR---LDQILGESLIADVMLWRRREVTVGILLVTVSTWLVFEKSGYXXXXXXXXXXX 224
           RLFNR   + QILG  L+ADVMLWR++ +TVGILLVT++ W+VFE SGY           
Sbjct: 6   RLFNRQRTVHQILGGGLVADVMLWRQKNLTVGILLVTLAAWVVFELSGYTLLSLVSSVFL 65

Query: 225 XXXXILFLWAKSAQILNRPAPPLPDLQLSEDVINEAAAFIRAQVNTLLAVSRDVTLGKDS 404
               ILFLWAKSA ILNRPAPPLP+L LSE+++NE AAFIR + NTLL VS+D+ LGKDS
Sbjct: 66  LLVSILFLWAKSAAILNRPAPPLPNLYLSEEIVNEVAAFIRTRTNTLLQVSQDIALGKDS 125

Query: 405 KLFFKVAACMWLISVVGGWTDLLTLGYTSVVVLLTVPALYQKYEDQIDKYVIMAYKELQR 584
           ++FFKVAA +WLISVVGG TD LTLGY S+V++LTVPALY++YED ID+YV+M Y++LQ 
Sbjct: 126 RMFFKVAAYLWLISVVGGLTDFLTLGYISLVIVLTVPALYERYEDYIDRYVMMGYRKLQL 185

Query: 585 FYVKLDAG-LSKIRTLILEKRK 647
            Y+KLD   +SK++  ILEKRK
Sbjct: 186 LYMKLDEECISKVQKWILEKRK 207


>ref|XP_004137740.1| PREDICTED: reticulon-like protein B12-like [Cucumis sativus]
           gi|449483434|ref|XP_004156590.1| PREDICTED:
           reticulon-like protein B12-like [Cucumis sativus]
          Length = 209

 Score =  233 bits (594), Expect = 5e-59
 Identities = 109/194 (56%), Positives = 152/194 (78%), Gaps = 1/194 (0%)
 Frame = +3

Query: 69  LDQILGESLIADVMLWRRREVTVGILLVTVSTWLVFEKSGYXXXXXXXXXXXXXXXILFL 248
           L +I+G  ++ADV+LWRR+ +T+GILL+T++TWLVFE+ GY               I+FL
Sbjct: 14  LHEIVGGGIVADVILWRRKNLTMGILLITLATWLVFERCGYTLLSLISSVLLLLVTIIFL 73

Query: 249 WAKSAQILNRPAPPLPDLQLSEDVINEAAAFIRAQVNTLLAVSRDVTLGKDSKLFFKVAA 428
           WAKSA ILNRPAPPLP+L LSED++NEAA+FIR++VN  L+V++D+ +GKD +LFFKVAA
Sbjct: 74  WAKSASILNRPAPPLPELYLSEDMVNEAASFIRSRVNAFLSVTQDIAMGKDPRLFFKVAA 133

Query: 429 CMWLISVVGGWTDLLTLGYTSVVVLLTVPALYQKYEDQIDKYVIMAYKELQRFYVKLD-A 605
           C+WLISV+ G TD++TL YTS++++LT+PALY+KYED +D++ I+ YK+L +FYVKLD  
Sbjct: 134 CLWLISVISGLTDMITLAYTSLLLVLTIPALYEKYEDYVDRHAILMYKKLYQFYVKLDEM 193

Query: 606 GLSKIRTLILEKRK 647
            +   +  ILEK K
Sbjct: 194 RVLTYQQWILEKEK 207


>ref|XP_003516933.1| PREDICTED: reticulon-like protein B12-like [Glycine max]
          Length = 209

 Score =  228 bits (580), Expect = 2e-57
 Identities = 114/202 (56%), Positives = 151/202 (74%), Gaps = 4/202 (1%)
 Frame = +3

Query: 54  RLFNR---LDQILGESLIADVMLWRRREVTVGILLVTVSTWLVFEKSGYXXXXXXXXXXX 224
           RLFNR   L +ILG   +AD++LWRR+ +TVGILLVT+  W+VFE+SGY           
Sbjct: 6   RLFNRQRGLHEILGGGQVADLILWRRKNLTVGILLVTLGVWVVFERSGYTLLSLISNVLL 65

Query: 225 XXXXILFLWAKSAQILNRPAPPLPDLQLSEDVINEAAAFIRAQVNTLLAVSRDVTLGKDS 404
               ILFLWAKSA ILNRPAPPLP L+LSE++ NEA  FI  +VN LL+VS+D+ LGKDS
Sbjct: 66  LLIVILFLWAKSADILNRPAPPLPQLRLSEEMANEAKTFICTRVNDLLSVSQDIALGKDS 125

Query: 405 KLFFKVAACMWLISVVGGWTDLLTLGYTSVVVLLTVPALYQKYEDQIDKYVIMAYKELQR 584
           +LF KVAA +WLIS++GG TD LTL YTS++++LTVPA+Y++YED ID Y++  Y++L  
Sbjct: 126 RLFLKVAAYLWLISIIGGLTDFLTLAYTSLLLVLTVPAIYERYEDYIDMYILKGYRKLCL 185

Query: 585 FYVKLDAG-LSKIRTLILEKRK 647
            +VK++ G +SK+   ILEK+K
Sbjct: 186 LHVKINEGYVSKVHNWILEKKK 207


>ref|XP_003520935.1| PREDICTED: reticulon-like protein B12-like [Glycine max]
          Length = 209

 Score =  225 bits (573), Expect = 1e-56
 Identities = 111/202 (54%), Positives = 150/202 (74%), Gaps = 4/202 (1%)
 Frame = +3

Query: 54  RLFNR---LDQILGESLIADVMLWRRREVTVGILLVTVSTWLVFEKSGYXXXXXXXXXXX 224
           RLFNR   L +ILG   +AD++LWRR+ +TVGILLVT++ W+VFE+SGY           
Sbjct: 6   RLFNRQRSLHEILGGGQVADLILWRRKNLTVGILLVTLAVWVVFERSGYTLLSLVSNVLL 65

Query: 225 XXXXILFLWAKSAQILNRPAPPLPDLQLSEDVINEAAAFIRAQVNTLLAVSRDVTLGKDS 404
               ILFLWAKSA ILNRPAPPLP L LSE++ NE   FIR +VN LL+VS+D+ LGKDS
Sbjct: 66  LLIVILFLWAKSAAILNRPAPPLPQLHLSEEMANEVKTFIRTRVNDLLSVSQDIALGKDS 125

Query: 405 KLFFKVAACMWLISVVGGWTDLLTLGYTSVVVLLTVPALYQKYEDQIDKYVIMAYKELQR 584
           +LF KVAA +W+IS++GG TD LTL YTS+ ++LTVPA+Y++YED IDKY++  Y++L  
Sbjct: 126 RLFLKVAAYLWIISIIGGLTDFLTLAYTSLFIVLTVPAIYERYEDYIDKYILKGYRKLCL 185

Query: 585 FYVKL-DAGLSKIRTLILEKRK 647
            ++K+ +  ++K+   ILEK+K
Sbjct: 186 LHLKINEQYVNKVHNWILEKKK 207


>ref|XP_002527867.1| 3-beta-hydroxy-delta5-steroid dehydrogenase, putative [Ricinus
           communis] gi|223532718|gb|EEF34498.1|
           3-beta-hydroxy-delta5-steroid dehydrogenase, putative
           [Ricinus communis]
          Length = 209

 Score =  218 bits (556), Expect = 1e-54
 Identities = 112/202 (55%), Positives = 148/202 (73%), Gaps = 4/202 (1%)
 Frame = +3

Query: 54  RLFNR---LDQILGESLIADVMLWRRREVTVGILLVTVSTWLVFEKSGYXXXXXXXXXXX 224
           RLFNR   + +ILG  L+ADV+LWR++ VT GILL  +++W+VFE+SGY           
Sbjct: 6   RLFNRQTTVHEILGGGLVADVILWRQKNVTGGILLAALASWVVFERSGYTLLSLFSSVVL 65

Query: 225 XXXXILFLWAKSAQILNRPAPPLPDLQLSEDVINEAAAFIRAQVNTLLAVSRDVTLGKDS 404
               ILFLWAKSA ILNRPAPPLP+L LSE++ NE A+FIR  VN  L+VS+D+ LGKD+
Sbjct: 66  LLVAILFLWAKSAAILNRPAPPLPELHLSEEMANEVASFIRTHVNDFLSVSQDIALGKDT 125

Query: 405 KLFFKVAACMWLISVVGGWTDLLTLGYTSVVVLLTVPALYQKYEDQIDKYVIMAYKELQR 584
           +LFFKVA  + LIS+VGG TD ++L YTS+V+ LT+PALY+++ED IDKYV M Y++ Q+
Sbjct: 126 RLFFKVAGYLLLISIVGGLTDFVSLCYTSLVITLTIPALYERHEDFIDKYVKMGYEKSQQ 185

Query: 585 FYVKLDAG-LSKIRTLILEKRK 647
            YV  D   + +IR  ILEK+K
Sbjct: 186 LYVNFDVECIGRIRKWILEKQK 207


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