BLASTX nr result

ID: Coptis24_contig00019247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019247
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320052.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002511688.1| O-sialoglycoprotein endopeptidase, putative ...    67   2e-09
ref|NP_566039.1| glycoprotease 1 [Arabidopsis thaliana] gi|17380...    65   4e-09
ref|XP_002880168.1| predicted protein [Arabidopsis lyrata subsp....    65   7e-09
ref|XP_003521890.1| PREDICTED: probable tRNA threonylcarbamoylad...    64   2e-08

>ref|XP_002320052.1| predicted protein [Populus trichocarpa] gi|222860825|gb|EEE98367.1|
           predicted protein [Populus trichocarpa]
          Length = 464

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/46 (73%), Positives = 37/46 (80%), Gaps = 3/46 (6%)
 Frame = +1

Query: 1   LCLCVGARKAQKLVGSFSLPIIGIHHMEAHALVARLVS---QLPMM 129
           LCL VG RKA+KL GSF+LPIIGIHHMEAHALVARL+    Q P M
Sbjct: 157 LCLRVGVRKARKLAGSFNLPIIGIHHMEAHALVARLIERELQFPFM 202


>ref|XP_002511688.1| O-sialoglycoprotein endopeptidase, putative [Ricinus communis]
           gi|223548868|gb|EEF50357.1| O-sialoglycoprotein
           endopeptidase, putative [Ricinus communis]
          Length = 455

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/39 (79%), Positives = 35/39 (89%)
 Frame = +1

Query: 1   LCLCVGARKAQKLVGSFSLPIIGIHHMEAHALVARLVSQ 117
           LCL VG RKA+KL GSF+LP++GIHHMEAHALVARLV Q
Sbjct: 148 LCLRVGVRKARKLAGSFNLPMVGIHHMEAHALVARLVEQ 186


>ref|NP_566039.1| glycoprotease 1 [Arabidopsis thaliana] gi|17380780|gb|AAL36220.1|
           putative O-sialoglycoprotein endopeptidase [Arabidopsis
           thaliana] gi|18460924|gb|AAK00530.1| sialoglycoprotease
           GCP1 [Arabidopsis thaliana] gi|20196913|gb|AAB82636.2|
           putative O-sialoglycoprotein endopeptidase [Arabidopsis
           thaliana] gi|21436377|gb|AAM51358.1| putative
           O-sialoglycoprotein endopeptidase [Arabidopsis thaliana]
           gi|330255438|gb|AEC10532.1| glycoprotease 1 [Arabidopsis
           thaliana]
          Length = 480

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/39 (74%), Positives = 35/39 (89%)
 Frame = +1

Query: 1   LCLCVGARKAQKLVGSFSLPIIGIHHMEAHALVARLVSQ 117
           LCL VG RKA+++ G+FSLPI+G+HHMEAHALVARLV Q
Sbjct: 169 LCLRVGVRKARRVAGNFSLPIVGVHHMEAHALVARLVEQ 207


>ref|XP_002880168.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326007|gb|EFH56427.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 468

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = +1

Query: 1   LCLCVGARKAQKLVGSFSLPIIGIHHMEAHALVARLVSQ 117
           LCL VG RKA+ + G+FSLPI+G+HHMEAHALVARLV Q
Sbjct: 159 LCLRVGVRKARSVAGNFSLPIVGVHHMEAHALVARLVEQ 197


>ref|XP_003521890.1| PREDICTED: probable tRNA threonylcarbamoyladenosine biosynthesis
           protein osgepl1-like [Glycine max]
          Length = 445

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/46 (67%), Positives = 36/46 (78%), Gaps = 3/46 (6%)
 Frame = +1

Query: 1   LCLCVGARKAQKLVGSFSLPIIGIHHMEAHALVARLVS---QLPMM 129
           LCL VG +KA+K+ G F+LPIIGIHHMEAHALVARL+    Q P M
Sbjct: 139 LCLRVGVQKARKIAGGFNLPIIGIHHMEAHALVARLIEKDLQFPFM 184


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