BLASTX nr result
ID: Coptis24_contig00019237
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019237 (907 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI33881.3| unnamed protein product [Vitis vinifera] 129 1e-27 ref|XP_004165982.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 101 3e-19 ref|XP_004148760.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 100 4e-19 ref|XP_002329560.1| predicted protein [Populus trichocarpa] gi|2... 91 5e-16 ref|XP_003612904.1| Ubiquitin carboxyl-terminal hydrolase [Medic... 89 1e-15 >emb|CBI33881.3| unnamed protein product [Vitis vinifera] Length = 547 Score = 129 bits (323), Expect = 1e-27 Identities = 104/274 (37%), Positives = 141/274 (51%), Gaps = 22/274 (8%) Frame = +1 Query: 1 KLDDSKVTKVAEDFVLSQEAYIIFYARQGTPWFSTLMETQ-----VQRAITSPKSVLDDV 165 +LDDSKVT V ED+VL QEAYI+FYARQGTPWFS+LM+TQ + SPKSVLD+V Sbjct: 246 RLDDSKVTSVPEDYVLHQEAYILFYARQGTPWFSSLMQTQKPCLDPNTSGNSPKSVLDNV 305 Query: 166 DA-STTAPNEANTVS-GYNFFRNYAEKIPVTTS----PKPVLVDVDA-----ACTTVPIK 312 D+ ST+ P AN S + + A++I S V V D T +P+ Sbjct: 306 DSISTSLPTLANVYSHEASETVDAADEISTCLSGGGRGDVVQVHEDGDVPHRVDTPMPLG 365 Query: 313 AIP-FSGSKYCVRNYAEKVPAEASLDLSREKFDKASENVDVWXXXXXXXXXXXDLYFEDP 489 F G+ +N + P + +EN + + Sbjct: 366 VTSCFDGTLDHTQNISTTSPCR-----DHDGNQHINENCKSKIHPQTPPRSPSPDIYAEE 420 Query: 490 P-ETLYRIPVDHLEPKYHTPCNKASNKAVEDAKMKEAIRLTRSMPSSRAKRLRTLL-GSQ 663 P E Y IP HL K C K NKA+ED++ +EA +L ++MP+SR+ RL + GSQ Sbjct: 421 PPEVSYNIPRGHLRQKNQVACKKPLNKALEDSRKREACKLCKNMPASRSMRLMAAMKGSQ 480 Query: 664 SEGAISK---KRRMTAGSGGEKSSPSGAYRKINP 756 SEG++ K KRRM + + GE S + A RK NP Sbjct: 481 SEGSLGKKKSKRRMESSANGE--SNTRARRKSNP 512 >ref|XP_004165982.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis sativus] Length = 621 Score = 101 bits (251), Expect = 3e-19 Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 11/260 (4%) Frame = +1 Query: 1 KLDDSKVTKVAEDFVLSQEAYIIFYARQGTPWFSTLME-----TQVQRAITSPKSVLDDV 165 ++DDS VT V E++VLS+EAYI+ Y R+GT WFS+L++ + SPKSVL ++ Sbjct: 368 RMDDSLVTSVTEEYVLSREAYILLYKRKGTSWFSSLIQRSDPCLNSDSSNPSPKSVLQNI 427 Query: 166 D---ASTTAPNEANTVSGYNFFRNYAEKIPVTTSPKPVLVDVDAACTTVPIKAIPFSGSK 336 +S A ++ N S A T P P + + + + S Sbjct: 428 GTGCSSFAAESKVNHES--------ANAPADTLQPSPARFSCEMENQDTGVSDLENATSA 479 Query: 337 YCVRNYAEKVPAEASLDLSREK-FDKASENVDVWXXXXXXXXXXXDLYFEDPPETLYRIP 513 N E ++S ++++ + E++D + D F PE YRIP Sbjct: 480 NL--NIVESATTKSSPIVTKDLCLNDEDESIDGFHPLSPVRSPSPDNVFR-TPEPQYRIP 536 Query: 514 VDHLEPKYHTPCNKASNKAVEDAKMKEAIR-LTRSMPSSR-AKRLRTLLGSQSEGAISKK 687 VDHL+ + + NK VED++ K A+R + ++MP SR +K + +LGSQSEG+ K Sbjct: 537 VDHLKTEKCSTSGSPLNKGVEDSERKAAMRYVKKNMPGSRGSKMIAAILGSQSEGSSLNK 596 Query: 688 RRMTAGSGGEKSSPSGAYRK 747 ++ ++SSP RK Sbjct: 597 KKRLRSLPCKRSSPPNTRRK 616 >ref|XP_004148760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis sativus] Length = 676 Score = 100 bits (250), Expect = 4e-19 Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 11/260 (4%) Frame = +1 Query: 1 KLDDSKVTKVAEDFVLSQEAYIIFYARQGTPWFSTLME-----TQVQRAITSPKSVLDDV 165 ++DDS VT V E++VLS+EAYI+ Y R+GT WFS+L++ + SPKSVL ++ Sbjct: 423 RMDDSLVTSVTEEYVLSREAYILLYKRKGTSWFSSLIQRSDPCLNSDSSNPSPKSVLQNI 482 Query: 166 D---ASTTAPNEANTVSGYNFFRNYAEKIPVTTSPKPVLVDVDAACTTVPIKAIPFSGSK 336 +S A ++ N S A T P P + + + + S Sbjct: 483 GTGCSSFAAESKVNHES--------ANAPADTLQPSPARFSCEMENQDTGVSDLENATSA 534 Query: 337 YCVRNYAEKVPAEASLDLSREK-FDKASENVDVWXXXXXXXXXXXDLYFEDPPETLYRIP 513 N E ++S ++++ + E++D + D F PE YRIP Sbjct: 535 NL--NIVESATMKSSPIVTKDLCLNDEDESIDGFHPLSPVRSPSPDNVFR-TPEPQYRIP 591 Query: 514 VDHLEPKYHTPCNKASNKAVEDAKMKEAIR-LTRSMPSSR-AKRLRTLLGSQSEGAISKK 687 VDHL+ + + NK VED++ K A+R + ++MP SR +K + +LGSQSEG+ K Sbjct: 592 VDHLKTEKCSTSGSPLNKGVEDSERKAAMRYVKKNMPGSRGSKMIAAILGSQSEGSSLNK 651 Query: 688 RRMTAGSGGEKSSPSGAYRK 747 ++ ++SSP RK Sbjct: 652 KKRLRSLPCKRSSPPNTRRK 671 >ref|XP_002329560.1| predicted protein [Populus trichocarpa] gi|222870269|gb|EEF07400.1| predicted protein [Populus trichocarpa] Length = 809 Score = 90.5 bits (223), Expect = 5e-16 Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 23/272 (8%) Frame = +1 Query: 1 KLDDSKVTKVAEDFVLSQEAYIIFYARQGTPWFSTLMETQV-----QRAITSPKSVLDDV 165 KLDD +V+K E+FVLSQ AYI+FYAR+GTPW S+L++ Q + TSPKSVLD+ Sbjct: 543 KLDDPEVSKEREEFVLSQAAYILFYAREGTPWCSSLIKPQEFCLDRSNSNTSPKSVLDNA 602 Query: 166 DASTTAPNEANTVSGYNFFRNYAEKIPVTTSPKPVLVDVDAACTTVPIKAIPFSGSKYCV 345 ++ + + +++ + + T++ P + + + + I F S C Sbjct: 603 NSECISVADKDSLE----TSVIKDAVEATSTHIPCEREFEEIVSRGETEGISFQIS--CA 656 Query: 346 RNYAEKVPAEAS------------------LDLSREKFDKASENVDVWXXXXXXXXXXXD 471 +P S D S + +K D+ D Sbjct: 657 NMVDVSLPHGVSDGHDGVLHDEMLCFPPVEEDYSNQCAEKIGRKGDL-RPSAPPRSPTSD 715 Query: 472 LYFEDPPETLYRIPVDHLEPKYHTPCNKASNKAVEDAKMKEAIRLTRSMPSSRAKRLRTL 651 +Y + PE IP +HL+ + H C ++S K +D++ EA+R + MP++R +L Sbjct: 716 VYSGELPEARRCIPREHLKVENHVNCKRSSKKGTKDSQTAEALRCIKRMPTARGMKLMAA 775 Query: 652 LGSQSEGAISKKRRMTAGSGGEKSSPSGAYRK 747 L +++ + S +++SP G+ RK Sbjct: 776 LLPRND------KTRPRSSPCKRASPPGSRRK 801 >ref|XP_003612904.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula] gi|355514239|gb|AES95862.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula] Length = 715 Score = 89.0 bits (219), Expect = 1e-15 Identities = 88/289 (30%), Positives = 123/289 (42%), Gaps = 32/289 (11%) Frame = +1 Query: 1 KLDDSKVTKVAEDFVLSQEAYIIFYARQGTPWFSTLMETQV-----QRAITSPKSVLDDV 165 KLDDS VTKV+E VLSQEAYI+FYARQGTPWFS+ E+ + R TSPKSVLD Sbjct: 423 KLDDSMVTKVSEGTVLSQEAYILFYARQGTPWFSSFAESTIPCLNLSRMNTSPKSVLDIT 482 Query: 166 DA---STTAPNEANTVSGYNFFRNYAEKIPVTTSPKPVLVDVDAACTTVPI-KAIPF--S 327 D S + NE SG + +EK + + D P K P S Sbjct: 483 DGQDKSFSISNENIERSGVGKSKKNSEKSDYSCQQSRKFPENDDVIDASPCRKQFPAGPS 542 Query: 328 GSKYCVRNYAEKVPAE-------ASLDLSREKFDKASENV------------DVWXXXXX 450 K N +E + A+ + +++ +ENV D Sbjct: 543 NQKTLHLNGSEDISAQVLPVNYASPTGIAKPGGSSYAENVAPDKSKCSLEANDFIENDVF 602 Query: 451 XXXXXXDLYFEDPPETLYRIPVDHLEPKYHTPCNK--ASNKAVEDAKMKEAIRLTRSMPS 624 + P ++I DHL+ + K +S K+ ++ + K A R+MP Sbjct: 603 NALTPPNSPPSQTPGKSFQISRDHLKKEKQGISGKRSSSGKSSDNPQNKAARAYVRNMPG 662 Query: 625 SRAKRLRTLLGSQSEGAISKKRRMTAGSGGEKSSPSGAYRKINPSIVSF 771 SR LLG E KR+ T S +K S S + + S+ S+ Sbjct: 663 SRRGAFLDLLGDSPE----NKRKKTGSSHSDKDSSSARKKSGHASVGSY 707