BLASTX nr result
ID: Coptis24_contig00019235
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019235 (607 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002319579.1| predicted protein [Populus trichocarpa] gi|2... 236 3e-60 ref|XP_002266607.2| PREDICTED: uncharacterized protein LOC100250... 222 5e-56 ref|XP_003522852.1| PREDICTED: uncharacterized protein LOC100804... 218 7e-55 ref|XP_003527515.1| PREDICTED: uncharacterized protein LOC100805... 215 6e-54 ref|XP_002534606.1| structural constituent of ribosome, putative... 214 7e-54 >ref|XP_002319579.1| predicted protein [Populus trichocarpa] gi|222857955|gb|EEE95502.1| predicted protein [Populus trichocarpa] Length = 187 Score = 236 bits (601), Expect = 3e-60 Identities = 122/158 (77%), Positives = 131/158 (82%), Gaps = 3/158 (1%) Frame = +2 Query: 143 MLKQVLS---NKGGLASSGDKIMPCLYLLTSGFHKGQVCFAPRSFFGVEDFLDDDNSRPY 313 MLKQV NKG A+ GDK+ P LY+ +GFH GQ APRSFFGVEDFLDDDNSRPY Sbjct: 1 MLKQVFGKVLNKGFFANGGDKLRPGLYVPNTGFHNGQAHCAPRSFFGVEDFLDDDNSRPY 60 Query: 314 TFXXXXXXXXXXXHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSRQVAVAGTNSK 493 T+ H+SFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTS+QVAVAGTNSK Sbjct: 61 TYQKGKKSKNPNKHLSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSK 120 Query: 494 DIKAVLKSRSDIPACLSVGQILADRAREADVYTAAYTP 607 DIKAVLKSRSDIPACL+VGQILADRAREADVYTA+YTP Sbjct: 121 DIKAVLKSRSDIPACLAVGQILADRAREADVYTASYTP 158 >ref|XP_002266607.2| PREDICTED: uncharacterized protein LOC100250278 [Vitis vinifera] gi|298204993|emb|CBI34300.3| unnamed protein product [Vitis vinifera] Length = 187 Score = 222 bits (565), Expect = 5e-56 Identities = 110/147 (74%), Positives = 123/147 (83%) Frame = +2 Query: 167 KGGLASSGDKIMPCLYLLTSGFHKGQVCFAPRSFFGVEDFLDDDNSRPYTFXXXXXXXXX 346 KG A+ D+ PCLY+ TSGFH G+ APRSFFGVEDFLDDDNSRPYT+ Sbjct: 12 KGVWANGRDQFRPCLYVPTSGFHNGKAHLAPRSFFGVEDFLDDDNSRPYTYQKEKKSKNP 71 Query: 347 XXHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSRQVAVAGTNSKDIKAVLKSRSD 526 H+SFKQRT AYMEPFTLDV ISKRFVSASLTHRVTS+QVAVAGTNSKDIKAVLKSRSD Sbjct: 72 NKHISFKQRTGAYMEPFTLDVLISKRFVSASLTHRVTSKQVAVAGTNSKDIKAVLKSRSD 131 Query: 527 IPACLSVGQILADRAREADVYTAAYTP 607 IPACL++G+IL++RAREADVYTA+YTP Sbjct: 132 IPACLAIGRILSERAREADVYTASYTP 158 >ref|XP_003522852.1| PREDICTED: uncharacterized protein LOC100804348 [Glycine max] Length = 187 Score = 218 bits (555), Expect = 7e-55 Identities = 108/158 (68%), Positives = 128/158 (81%), Gaps = 3/158 (1%) Frame = +2 Query: 143 MLKQVLSN---KGGLASSGDKIMPCLYLLTSGFHKGQVCFAPRSFFGVEDFLDDDNSRPY 313 MLKQ + G A G++++P +Y+ +S FH GQ APRSFFGVEDFLDDDNSRPY Sbjct: 1 MLKQAIGRIFRTGVYACEGNRVLPWIYVPSSFFHHGQAHMAPRSFFGVEDFLDDDNSRPY 60 Query: 314 TFXXXXXXXXXXXHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSRQVAVAGTNSK 493 T+ H+SFKQRT+AYMEPFTLDVFISKRFVSASLTHRVTS+QVAVAGTNSK Sbjct: 61 TYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSK 120 Query: 494 DIKAVLKSRSDIPACLSVGQILADRAREADVYTAAYTP 607 DIKAVL+SRSDIPAC+++G+ILA+RA+EADVYT +YTP Sbjct: 121 DIKAVLRSRSDIPACIAIGRILAERAKEADVYTGSYTP 158 >ref|XP_003527515.1| PREDICTED: uncharacterized protein LOC100805468 [Glycine max] Length = 202 Score = 215 bits (547), Expect = 6e-54 Identities = 107/158 (67%), Positives = 127/158 (80%), Gaps = 3/158 (1%) Frame = +2 Query: 143 MLKQVLSN---KGGLASSGDKIMPCLYLLTSGFHKGQVCFAPRSFFGVEDFLDDDNSRPY 313 MLKQV+ A G++++P +Y+ + FH GQ APRSFFGVEDFLDDDNSRPY Sbjct: 16 MLKQVIGRICRTDVYACEGNRVLPWIYVPSCFFHHGQAHMAPRSFFGVEDFLDDDNSRPY 75 Query: 314 TFXXXXXXXXXXXHVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSRQVAVAGTNSK 493 T+ H+SFKQRT+AYMEPFTLDVFISKRFVSASLTHRVTS+QVAVAGTNSK Sbjct: 76 TYQKGKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSK 135 Query: 494 DIKAVLKSRSDIPACLSVGQILADRAREADVYTAAYTP 607 DIKAVL+SRSDIPAC+++G+ILA+RA+EADVYT +YTP Sbjct: 136 DIKAVLRSRSDIPACIAIGRILAERAKEADVYTGSYTP 173 >ref|XP_002534606.1| structural constituent of ribosome, putative [Ricinus communis] gi|223524931|gb|EEF27777.1| structural constituent of ribosome, putative [Ricinus communis] Length = 188 Score = 214 bits (546), Expect = 7e-54 Identities = 112/159 (70%), Positives = 129/159 (81%), Gaps = 4/159 (2%) Frame = +2 Query: 143 MLKQVLS---NKGGLASSGDKIMPCLYLLTSGFHKGQVCFAPRSFFGVEDFLDDDNSRPY 313 MLKQVL ++G + GDK+ LY+ S FH GQV ++PRSFFGVEDFLDDDNSRPY Sbjct: 1 MLKQVLGKIIHRGPFLNGGDKLRLSLYVPGSCFHNGQVHYSPRSFFGVEDFLDDDNSRPY 60 Query: 314 TFXXXXXXXXXXX-HVSFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTSRQVAVAGTNS 490 T+ H+SFKQRT AYMEPFTLDVFISKRFVSASLTHRVTS+QVAVAGTNS Sbjct: 61 TYQKEKKSKNPNNKHMSFKQRTKAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNS 120 Query: 491 KDIKAVLKSRSDIPACLSVGQILADRAREADVYTAAYTP 607 KDIKA L+SRSDIPACL++G+IL++RAREADVYTA+YTP Sbjct: 121 KDIKAALRSRSDIPACLAIGRILSERAREADVYTASYTP 159